CF832370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCB_SCHPO (Probable succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=SPCC1620.08 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.641e-31 Identity = 72/180 (40.00%), Postives = 111/180 (61.67%), Query Frame = 2 Query: 308 QLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVH-IVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 Q R L +HEY +++ K+G++VP+G S +E +K +D+ +LVVK+Q+LAGGRG G F SGL+GGV + E A +M+G L+T+QTGP GKI + VY+CE+ + E YFAI++DR+ P+I+ +GG IE +A + P+ I+K + + A ++VD L Sbjct: 19 QKRNLALHEYISHDILRKFGVDVPRGAPARSGEEAEKVARDL--KVTDLVVKAQVLAGGRGKGQFDSGLRGGVRPVYDATEARMFAEQMIGHKLITRQTGPAGKICNVVYVCERKFIRKEYYFAILMDRENQCPMIVASDQGGVDIETVAAENPSAIIKRSLPNSPNLDPHIAEELVDKL 196
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_MAGSA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=sucC PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.685e-31 Identity = 75/178 (42.13%), Postives = 108/178 (60.67%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGL--KGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQG +++AKYG+ V KG + DE + +D+ VVKSQI AGGRG G FK+ KGGV + K EEV+ +MLGQ+L+TKQTGP GK V +VY+ + + E+Y ++++DR T I+ ++GG IE++A +P I+KV ID G ++ GL Sbjct: 1 MNIHEYQGKQVLAKYGVAVLKGGVAYTPDEAVQVAKDL--GGPVWVVKSQIHAGGRGAGRFKNDPNGKGGVRVAKSVEEVKTNVDQMLGQVLITKQTGPAGKEVKRVYIEQGCDIKRELYLSMLVDRATCRVTIVASTEGGMEIEEVAHNHPEKILKVAIDPVEGFQQYHGRQIAFGL 176
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_SULNB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sulfurovum sp. (strain NBC37-1) GN=sucC PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.712e-30 Identity = 72/176 (40.91%), Postives = 109/176 (61.93%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +N+HEYQ ++ A+YG+ PKG+ SVD +A +++ VVK+QI AGGRGLG GGV + K +EV +LA ++LG LVT QTGP+GK+V K+Y+ + + +E Y +++LDRK P+I+ ++GG +IED+AE P I+ VP+D G ++ GL Sbjct: 1 MNVHEYQAKQIFAEYGVPTPKGIMAESVDAAVEAAKEL--GGPIWVVKAQIHAGGRGLG-------GGVKLAKSLDEVRELADEILGMTLVTHQTGPEGKLVQKLYIEDGADIKDEFYLSVILDRKLEMPLIMASTEGGMNIEDVAENTPEKIITVPVDPTIGFQGFHGRELAFGL 167
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BRUSU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella suis GN=sucC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.236e-30 Identity = 78/179 (43.58%), Postives = 108/179 (60.34%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ YG + G+AV SV++ ++ + + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADAL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BRUSI (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=sucC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.236e-30 Identity = 78/179 (43.58%), Postives = 108/179 (60.34%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ YG + G+AV SV++ ++ + + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADAL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BRUO2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=sucC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.236e-30 Identity = 78/179 (43.58%), Postives = 108/179 (60.34%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ YG + G+AV SV++ ++ + + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADAL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BRUME (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella melitensis GN=sucC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.236e-30 Identity = 78/179 (43.58%), Postives = 108/179 (60.34%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ YG + G+AV SV++ ++ + + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADAL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BRUMB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=sucC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.236e-30 Identity = 78/179 (43.58%), Postives = 108/179 (60.34%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ YG + G+AV SV++ ++ + + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADAL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BRUC2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=sucC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.236e-30 Identity = 78/179 (43.58%), Postives = 108/179 (60.34%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ YG + G+AV SV++ ++ + + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADAL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BRUAB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella abortus GN=sucC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.236e-30 Identity = 78/179 (43.58%), Postives = 108/179 (60.34%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ YG + G+AV SV++ ++ + + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADAL 177 The following BLAST results are available for this feature:
BLAST of CF832370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832370 ID=CF832370; Name=CF832370; organism=Citrus sinensis; type=EST; length=848bpback to top |