CF832370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BRUA1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella abortus (strain S19) GN=sucC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.236e-30 Identity = 78/179 (43.58%), Postives = 108/179 (60.34%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ YG + G+AV SV++ ++ + + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADAL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_RHOCS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=sucC PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.506e-30 Identity = 75/178 (42.13%), Postives = 107/178 (60.11%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGL--KGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ KYG+ VP+G +++E + +++ VVKSQI AGGRG G FK KGGV +VK ++V MLG++LVTKQTGP+GK V ++Y+ E + E+Y +++LDR T+ I+ ++GG IE++A P IVKV ID G+ A KV L Sbjct: 1 MNIHEYQAKSLLKKYGVAVPRGGVAYTLEEARAVAKEL--GGPVWVVKSQIHAGGRGAGRFKDDPNGKGGVRVVKSIDDVVASTDAMLGKVLVTKQTGPEGKEVKRIYVEEGADIKRELYLSMLLDRATSRITIVASTEGGMEIEEVAHTSPEKIVKVAIDPVQGLQGYHARKVAFAL 176
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_DESAA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfatibacillum alkenivorans (strain AK-01) GN=sucC PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.472e-29 Identity = 74/166 (44.58%), Postives = 106/166 (63.86%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDV--FPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 + IHEYQ EL A YG+ VPKG V SVDE +A +++ FP +VVK+QI AGGRG G GGV + + +EV+ +AG++LG LVT QTGP+G+ V K+ + + L + E+YF+I++DR TA +I+ GG IE++A P I+KVP+D G+ Sbjct: 1 MKIHEYQAKELFANYGVPVPKGKPVFSVDEAVEAAKELGDFP----VVVKAQIHAGGRGKG-------GGVKLAQNIDEVKTIAGEILGMQLVTHQTGPEGQKVQKLLVEQGLDIAKELYFSIIVDRATAKIVIMCSEAGGMDIEEVAASTPEKIIKVPVDPLLGV 155
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_CHLCH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlorobium chlorochromatii (strain CaD3) GN=sucC PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.217e-29 Identity = 67/166 (40.36%), Postives = 105/166 (63.25%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPD--HKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +NIHEYQG +++ K+G+ VPKG+ S DE K+A + +F + +VVK+QI AGGRG GGV + K EE ++A +M+G L+T QTGP+GK+VS++ + E + + E Y I LDR T+ +++ ++GG IE +AE+ P ++K+ ID G+ Sbjct: 1 MNIHEYQGKDILRKFGVTVPKGIVAYSADEAKQAAEQLFAETGSSVVVVKAQIHAGGRGKA-------GGVKLAKSPEEAFEIARQMIGMTLITHQTGPEGKVVSRLLIEEGMGIEKEFYVGITLDRATSRNVLMVSTEGGMEIETVAEETPEKLLKIQIDPLFGM 159
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BARBK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=sucC PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.217e-29 Identity = 75/179 (41.90%), Postives = 108/179 (60.34%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ +YG V G+AV SV++ +K + + VVKSQI AGGRG G FK S KGGV + K EEV +MLG+ LVTKQTGP+GK V+++Y+ + ++ E+Y ++++DR T + ++GG IE +A + P I + ID G+TD D K+ D L Sbjct: 1 MNIHEYQAKRLLHEYGAPVANGVAVYSVEQAEKWAKKL--PGPLYVVKSQIHAGGRGKGNFKELDSDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGANIERELYLSLLIDRTTGRVAFVVSTEGGMDIETVAAETPEKICTLSIDPAEGVTDADCVKLCDEL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_SULDN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=sucC PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.508e-29 Identity = 72/176 (40.91%), Postives = 104/176 (59.09%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ ++ AKYG+ PKGL SV + + + VVK+QI AGGRGLG GGV + + EEVE L+ ++LG LVT QTGP+GK+V K+Y+ E + E+Y ++LDR P+I+ ++GG +IED+A P I+K+ +D G ++V GL Sbjct: 1 MNIHEYQAKQIFAKYGVPTPKGLMAESVKQAVANAETL--GGSIWVVKAQIHAGGRGLG-------GGVKLARSLEEVEQLSKEILGMTLVTHQTGPEGKLVQKLYIEEGADIKEELYLGVVLDRAREMPVIMASTEGGMAIEDVAHNTPEKIIKIAVDPAIGFQGFHGRELVFGL 167
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BART1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=sucC PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.508e-29 Identity = 72/179 (40.22%), Postives = 108/179 (60.34%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ +YG + G+AV S+++ +K + + VVKSQI AGGRG G FK KGGV + + EEV +MLG+ LVTKQTGP+GK V+++Y+ + + E+Y ++++DR + ++GG IE +AE+ P I +PIDV G+T D A++ D L Sbjct: 1 MNIHEYQAKRLLHEYGAPIANGVAVYSIEQAEKWAKKL--PGPLYVVKSQIHAGGRGKGQFKELGPDAKGGVRLAQSVEEVVANVQEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYLSLLVDRSVGRIAFVVSTEGGMDIETVAEETPEKIFTLPIDVTEGVTSADCARLCDAL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BACP2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus pumilus (strain SAFR-032) GN=sucC PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.508e-29 Identity = 72/172 (41.86%), Postives = 107/172 (62.21%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 832 +NIHEYQG E++ KYG++VP G + DE KA++++ + VVK+QI AGGRG GGV I K K+EV+ A ++LG+ LVT QTGP+G+ + ++ + E + E Y ++LDR T+ +++ +GGT IE++AEK P IVKV ID G+ A +V Sbjct: 1 MNIHEYQGKEILRKYGVSVPNGKVAFTPDEAVKASEEL--ESSVYVVKAQIHAGGRGKA-------GGVKIAKTKDEVKGFAEELLGKTLVTHQTGPEGREIKRLLIEEGCDIQKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKVVIDPAIGLQGYQAREV 163
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BARHE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella henselae GN=sucC PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.395e-29 Identity = 72/179 (40.22%), Postives = 108/179 (60.34%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ +YG + G+AV SV++ +K + + VVKSQI AGGRG G FK KGGV + K EEV +MLG+ LVTKQTGP+GK V+++Y+ + + E+Y ++++DR + ++GG IE +AE+ P I+ +PI+ G+T D A++ D L Sbjct: 1 MNIHEYQAKRLLHEYGAPIANGVAVYSVEQAEKWAKKL--PGPLYVVKSQIHAGGRGKGKFKELDPDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYLSLLVDRNVGRVAFVVSTEGGMDIETVAEETPEKILTLPINSTQGVTSSDCARLCDAL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_ACIBL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidobacteria bacterium (strain Ellin345) GN=sucC PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.395e-29 Identity = 72/173 (41.62%), Postives = 104/173 (60.12%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDH-KELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 832 + IHEYQG ++ KYG+ VP+G V + +E ++ D+ D K +VVK+QI AGGRG G GGV I K +E LAGK+LG L+T QTGP+GK V ++ + E L + E+Y +I+LDR P+ + + GG IE++A K PN I+K I+ G+ A K+ Sbjct: 1 MKIHEYQGKAILRKYGVAVPRGEMVTTREEAERVANDLMHDGAKGVVVKAQIHAGGRGKG-------GGVKIAKSVDEAGQLAGKILGMTLITHQTGPEGKKVQRLLIEETLPIERELYLSIVLDRSNGKPVFMASAAGGMEIEEVAAKDPNAIIKEWIEPGYGLGAFQARKI 166 The following BLAST results are available for this feature:
BLAST of CF832370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832370 ID=CF832370; Name=CF832370; organism=Citrus sinensis; type=EST; length=848bpback to top |