CF832370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_CHLL2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=sucC PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.227e-28 Identity = 67/166 (40.36%), Postives = 107/166 (64.46%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKE--LVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +NIHEYQG +++ K+G++VP+G+ S DE K+A Q +F + +VVK+QI AGGRG GGV + K +E ++A +MLG LVT QTGP+GK VS++ + E +++ E Y I LDR T+ +++ ++GG IE +AE+ P+ ++K+ +D G+ Sbjct: 1 MNIHEYQGKDILKKFGVSVPRGIVAFSPDEAKQAAQQLFEEQGSPVVVVKAQIHAGGRGKA-------GGVKLAKSPDEAMEIARQMLGATLVTHQTGPEGKQVSRLLVEEGMNIDREFYVGITLDRSTSRNVLMVSTEGGMEIEKVAEETPDKLLKIQVDPLYGL 159
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_PELLD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pelodictyon luteolum (strain DSM 273) GN=sucC PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.093e-28 Identity = 66/166 (39.76%), Postives = 105/166 (63.25%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFP--DHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +NIHEYQG +++ K+G+ VPKG+ S +E K+A + +F D +V+K+QI AGGRG GGV + K EE ++A +MLG LVT QTGP+GK V ++ + E +++ E Y I LDR T+ +++ ++GG IE +AE+ P +++K+ +D G+ Sbjct: 1 MNIHEYQGKDILRKFGVAVPKGIVAYSAEEAKQAAEQLFAEQDSPVVVIKAQIHAGGRGKA-------GGVKLAKSPEEAHEIASQMLGTTLVTHQTGPEGKEVRRLLVEEGMNIDREFYVGITLDRATSNNVLMISTEGGMEIEKVAEETPELLLKIQVDARFGL 159
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_NAUPA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=sucC PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.093e-28 Identity = 72/176 (40.91%), Postives = 104/176 (59.09%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ E+ KYG+ P+G + E ++ +++ VVK+QI AGGRG GGV + K +EVE +A +MLG LVT QTGP+GK+V KVY+ E + +E+Y ++LDR P+++ ++GG IE++AEK P I+KV ID G A K+ GL Sbjct: 1 MNIHEYQAKEIFRKYGVPTPRGGVAFTGPEARRVAEEL--GGNLWVVKAQIHAGGRGKA-------GGVKLAKSLDEVEKIAEEMLGMTLVTHQTGPEGKVVKKVYIEEGADIKDELYLGMVLDRALEMPVMMASTEGGMEIEEVAEKTPEKIIKVAIDPAIGFQPFHARKLAFGL 167
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_CHLPB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlorobium phaeobacteroides (strain BS1) GN=sucC PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.093e-28 Identity = 66/166 (39.76%), Postives = 108/166 (65.06%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKE--LVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +NIHEYQG +++ K+G++VPKG+ S E ++A + +F + + +VVK+QI AGGRG GGV + + EE ++AG++LG LVT QTGP+GK V ++ + E +++ E Y I LDR T+ +++ ++GG IE +AE+ P+ I+K+ ID +G+ Sbjct: 1 MNIHEYQGKDILRKFGVSVPKGIVAFSPAEARQAAEQLFEEQESNVVVVKAQIHAGGRGKA-------GGVKLAQSPEEAYEIAGQILGATLVTHQTGPEGKEVRRLLVEEGMNIEKEFYVGITLDRATSNNVLMVSTEGGMEIEKVAEETPDKILKIQIDPLHGL 159
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCB2_CAEEL (Probable succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C50F7.4 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.093e-28 Identity = 72/184 (39.13%), Postives = 111/184 (60.33%), Query Frame = 2 Query: 302 QQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKG--GVHIVKKEEVE-DLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 + Q R LN+ E+Q E++ K+G +V + ++ E ++ F DH E VVK+QILAGGRG G F +G KG GV I K+++ + +M+G+ LVTKQT +G V KV + E + + E Y A+++DR++ GP+++ GG IE +AEK P I K PID+ G+T+ + K+ L Sbjct: 14 KSQRRFLNLQEFQSKEILEKHGCSVQNFVVASNRKEAEEKWMS-FGDH-EYVVKAQILAGGRGKGKFINGTKGIGGVFITKEKDAALEAIDEMIGKRLVTKQTTSEGVRVDKVMIAEGVDIKRETYLAVLMDRESNGPVVVASPDGGMDIEAVAEKTPERIFKTPIDIQMGMTEGQSLKIAKDL 195
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_CHLTE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlorobium tepidum GN=sucC PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28 Identity = 69/173 (39.88%), Postives = 106/173 (61.27%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKE--LVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAK 829 +NIHEYQG ++ ++G+ VPKG+ S +E K+A + +F + +VVK+QI AGGRG GGV + K EEV ++A KMLG LVT QTGP+GK V ++ + E +++ E Y I LDR T+ +++ ++GG IE +AE+ P ++K+ +D G+ A K Sbjct: 1 MNIHEYQGKGILKQFGVAVPKGIVAFSAEEAKQAAEQLFEEQSSPVVVVKAQIHAGGRGKA-------GGVKLAKSPEEVFEIAQKMLGATLVTHQTGPEGKEVRRLLIEEGMNIDKEFYLGITLDRTTSSNVLMVSTEGGMEIEKVAEETPEKLLKIHVDPVYGLQGFQARK 166
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BARQU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella quintana GN=sucC PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.662e-28 Identity = 70/179 (39.11%), Postives = 106/179 (59.22%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ +YG + G+AV S+++ +K + + VVKSQI AGGRG G FK KGGV + K EEV +MLG+ LVTKQTGP+GK V+++Y+ + + E+Y ++++DR + +GG IE +AE+ P I+ +P+D G+T D ++ D L Sbjct: 1 MNIHEYQAKRLLHEYGAPIANGVAVYSIEQAEKWAKKL--PGPLYVVKSQIHAGGRGKGKFKELDLDSKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYLSLLVDRAVGRVAFVVSMEGGMDIETVAEETPEKILTLPVDPVQGVTSADCKRLCDAL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_PARDP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Paracoccus denitrificans (strain Pd 1222) GN=sucC PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.089e-28 Identity = 73/179 (40.78%), Postives = 105/179 (58.66%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ +YG V G V DE K A ++ D VVK+QI AGGRG G FK +G KGGV + K EE E+LA +MLG+ LVT QTG GK V+++Y+ + + E+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L Sbjct: 1 MNIHEYQAKALLRQYGAPVSDGRVVMKADEAKAAAGEL--DGPLWVVKAQIHAGGRGKGHFKEKEAGEKGGVRLAKSVEEAEELARQMLGRTLVTHQTGETGKQVNRIYIEDGSDIERELYLALLVDRGTSRVSFVASTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFAL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_MESSB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mesorhizobium sp. (strain BNC1) GN=sucC PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.953e-28 Identity = 72/175 (41.14%), Postives = 105/175 (60.00%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 832 +NIHEYQ EL+ YG V +G+A+ + E + A + + VVKSQI AGGRG G FK KGGV + K EEV A +MLG LVTKQTGP+GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P I+ + I G+T++D K+ Sbjct: 1 MNIHEYQAKELLRGYGAPVAQGVAIFTSGEAEAAAKKL--PGPLYVVKSQIHAGGRGKGKFKELSPDAKGGVRLAKSIEEVVANAKEMLGNTLVTKQTGPEGKQVNRLYIEDGADIARELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKILTLAIAPERGVTNDDVTKL 173
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_HERAR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Herminiimonas arsenicoxydans GN=sucC PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.953e-28 Identity = 71/169 (42.01%), Postives = 100/169 (59.17%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDA 823 +NIHEYQG E++ KYG+ PKG SVDE +A + + K VVK+QI AGGRG G GGV + K +EV A +LG LVT QTGP+G++V ++ + E + E+Y +++DR + ++ S+GG IE +AE P I KV ID F G+ D +A Sbjct: 1 MNIHEYQGKEILRKYGVTTPKGFPCFSVDEAVQAAEKL--GGKVWVVKAQIHAGGRGKG-------GGVKVAKSLDEVRKYANDILGMTLVTHQTGPEGRLVKRLLIEEGADIKKELYVGMVVDRGSQRVALMASSEGGMDIEHVAEHTPEKIHKVFIDPFKGLLDSEA 160 The following BLAST results are available for this feature:
BLAST of CF832370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832370 ID=CF832370; Name=CF832370; organism=Citrus sinensis; type=EST; length=848bpback to top |