CF832370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC2_ARCFU (Succinyl-CoA ligase [ADP-forming] subunit beta-2 OS=Archaeoglobus fulgidus GN=sucC2 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.316e-17 Identity = 53/165 (32.12%), Postives = 90/165 (54.55%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITD 814 + +HEYQ ++ +K+GI V +G SV++V+ +++ ++V+KSQ+L GGRG G+K + EE + A +M G +L +G IV K+Y+ E + + EMY + +DR G I S GG IE++A K+P I ++ ++ G+ D Sbjct: 1 MRLHEYQAKQIFSKHGIRVARGELATSVEDVRGIAEEL---GGKVVLKSQVLVGGRGKA---GGIKKAYSV---EEAVEKAKEMFGSVL-------KGHIVEKIYVEEMIEVQREMYAGLTIDRANKGIAAILSSVGGMDIEEIAVKHPEKIARIAVNPKWGLWD 149
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_PARUW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Protochlamydia amoebophila (strain UWE25) GN=sucC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.077e-16 Identity = 47/158 (29.75%), Postives = 87/158 (55.06%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPI 790 +N HE+Q +++ KYGI VP +S EV++ + + ++K Q+ AGGRG GGV + +E+ + + +++G+ ++ +QTGP G I +V + + + E Y I ++R+ A ++I GG +IE +A + PN ++ +PI Sbjct: 1 MNTHEFQAKQILRKYGIPVPDFYIASSSKEVEEIIKQY--QLQSAIIKVQVHAGGRGKA-------GGVKLATNPQEILEFSQELIGKKIINEQTGPSGMISHQVLISPAILIKKEFYLGITINRELASRVLIASPIGGVNIEKIAHEQPNQLLMLPI 149
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_XANCB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas campestris pv. campestris (strain B100) GN=sucC PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.407e-16 Identity = 57/164 (34.76%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +N HEYQ +L+A+YGI VP G ++ DE + + +VK+QI AGGRG GGV K ++V+ A KMLG + T QT V+ V + +V E+Y +I++DR T I S+GG IE +A + P +I + +D G+ Sbjct: 1 MNFHEYQSKQLLAEYGIPVPAGKVASTPDEAVEVANSL--GKGPWMVKAQIHAGGRGKA-------GGVKFCKTTDDVKAAADKMLGTKMSTYQTAGVELPVNLVLVTTAGEIVKELYLSILVDRGTKTVTYIASSEGGVEIEQVAAETPELIHSLNVDFVEGV 155
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_PYRIL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=sucC PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.407e-16 Identity = 50/176 (28.41%), Postives = 92/176 (52.27%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 + +HEY+ EL +YG+ +P G + DEV+K +++ +V+K+Q++ GRG GG+ I + EE +L+ KM G + +G +V K+Y+ + + + EMY ++++DR + + + GG IE++A+ P I KV +D G+ D ++ L Sbjct: 1 MKLHEYEAKELFLRYGVKIPPGKLALTPDEVRKIAEEI---GTPVVLKAQVVVAGRGKA-------GGIKIAQTPEEAYELSKKMFGMNI-------KGLVVRKLYVTKYVEVEREMYLSLIIDRASRRYLFLASPIGGVDIEEIAKTSPEKIKKVYVDPSIGLRDYHIRSIISWL 159
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_CHLFF (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydophila felis (strain Fe/C-56) GN=sucC PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.407e-16 Identity = 54/159 (33.96%), Postives = 89/159 (55.97%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLA--GKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPI 790 +++HEYQ +L++ Y I +P V+SV+E + +++ + VVK Q+ AGGRG K G I+ K E LA GK+L + QT + V KV + +++ +E Y A+++DRK P I+ GG IE++A+KYP+ ++ VP+ Sbjct: 1 MHLHEYQAKDLLSSYDIAIPPYRIVSSVEEGELVLRELGINAG--VVKVQVHAGGRG--------KNGGVIIAKSSSEILAAIGKLLKMRFESNQTSGESLPVEKVLITPLVNIASEYYLAVIMDRKNRCPAIMLSKAGGMDIEEVAQKYPDQLLTVPL 149
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_XANOR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas oryzae pv. oryzae GN=sucC PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16 Identity = 57/164 (34.76%), Postives = 84/164 (51.22%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +N HEYQ +L+A+YGI VP G A+ DE + +VK+QI AGGRG GGV K ++V+ A KMLG + T QT ++ V + +V E+Y +I++DR T I S+GG IE +A + P +I + +D G+ Sbjct: 1 MNFHEYQSKQLLAEYGIPVPSGKVAATPDEAVDVATSL--GKGPWMVKAQIHAGGRGKA-------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYLSILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGV 155
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_XANOP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=sucC PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16 Identity = 57/164 (34.76%), Postives = 84/164 (51.22%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +N HEYQ +L+A+YGI VP G A+ DE + +VK+QI AGGRG GGV K ++V+ A KMLG + T QT ++ V + +V E+Y +I++DR T I S+GG IE +A + P +I + +D G+ Sbjct: 1 MNFHEYQSKQLLAEYGIPVPSGKVAATPDEAVDVATSL--GKGPWMVKAQIHAGGRGKA-------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYLSILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGV 155
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_XANOM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=sucC PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16 Identity = 57/164 (34.76%), Postives = 84/164 (51.22%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +N HEYQ +L+A+YGI VP G A+ DE + +VK+QI AGGRG GGV K ++V+ A KMLG + T QT ++ V + +V E+Y +I++DR T I S+GG IE +A + P +I + +D G+ Sbjct: 1 MNFHEYQSKQLLAEYGIPVPSGKVAATPDEAVDVATSL--GKGPWMVKAQIHAGGRGKA-------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYLSILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGV 155
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_XANCP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas campestris pv. campestris GN=sucC PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16 Identity = 57/164 (34.76%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +N HEYQ +L+A+YGI VP G ++ DE + + +VK+QI AGGRG GGV K ++V+ A KMLG + T QT V+ V + +V E+Y +I++DR T I S+GG IE +A + P +I + +D G+ Sbjct: 1 MNFHEYQSKQLLAEYGIPVPAGKVASTPDEAVEVANSL--GKGPWMVKAQIHAGGRGKA-------GGVKFCKTTDDVKAAADKMLGTKMSTYQTAGVELPVNLVLVTTAGEIVKELYLSILVDRGTKTITYIASSEGGVEIEQVAAETPELIHSLNVDFVEGV 155
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_XANC8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas campestris pv. campestris (strain 8004) GN=sucC PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16 Identity = 57/164 (34.76%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +N HEYQ +L+A+YGI VP G ++ DE + + +VK+QI AGGRG GGV K ++V+ A KMLG + T QT V+ V + +V E+Y +I++DR T I S+GG IE +A + P +I + +D G+ Sbjct: 1 MNFHEYQSKQLLAEYGIPVPAGKVASTPDEAVEVANSL--GKGPWMVKAQIHAGGRGKA-------GGVKFCKTTDDVKAAADKMLGTKMSTYQTAGVELPVNLVLVTTAGEIVKELYLSILVDRGTKTITYIASSEGGVEIEQVAAETPELIHSLNVDFVEGV 155 The following BLAST results are available for this feature:
BLAST of CF832370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832370 ID=CF832370; Name=CF832370; organism=Citrus sinensis; type=EST; length=848bpback to top |