CF832370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_CHLTR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydia trachomatis GN=sucC PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15 Identity = 53/158 (33.54%), Postives = 84/158 (53.16%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPI 790 +++HEYQ +L+ Y + +P SV EV+ A Q K VVK+Q+ AGGRG GGV I E++ A K+L + QT ++KV + + + +E Y AI++DRK P+I+ GG IE++AEK P+ ++K+ + Sbjct: 1 MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVETAIQA--EQWKAGVVKAQVHAGGRGKN-------GGVVIAHSPEDLLAAADKLLHMQFSSNQTAGLSLPINKVLISPLVEIASEYYLAIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLLKMTL 149
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_CHLTA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=sucC PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15 Identity = 53/158 (33.54%), Postives = 84/158 (53.16%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPI 790 +++HEYQ +L+ Y + +P SV EV+ A Q K VVK+Q+ AGGRG GGV I E++ A K+L + QT ++KV + + + +E Y AI++DRK P+I+ GG IE++AEK P+ ++K+ + Sbjct: 1 MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVETAIQA--EQWKAGVVKAQVHAGGRGKN-------GGVVIAHSPEDLLAAADKLLHMQFSSNQTAGLSLPINKVLISPLVEIASEYYLAIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLLKMTL 149
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_THETH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Thermus thermophilus GN=sucC PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15 Identity = 52/173 (30.06%), Postives = 88/173 (50.87%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVV 835 +N+HEYQ E++A+YG+ VP G + +E K+ ++ K +V+K+Q+ GGRG GGV + +E + A +LG + +G V KV + E + + E Y ++LDR +++ +GG IE++A + P I K ID G +A ++V Sbjct: 1 MNLHEYQAKEILARYGVPVPPGKVAYTPEEAKRIAEEF---GKRVVIKAQVHVGGRGKA-------GGVKLADTPQEAYEKAQAILGMNI-------KGLTVKKVLVAEAVDIAKEYYAGLILDRAKKRVVLMLSKEGGVDIEEVAAERPEAIHKFWIDPHKGFRPFEAREMV 156
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_HERA2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=sucC PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15 Identity = 52/172 (30.23%), Postives = 89/172 (51.74%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGK-MLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 832 + +HEYQ +++A+YGI V G A+ +EV+K + + + VK+Q+ GGRG GG+ + AGK +LG + +G V KV + E ++ E+Y ++LDR T ++I S+GG IE++A+ P+ I+K+ D G+ A ++ Sbjct: 1 MKLHEYQARDIVARYGIPVTGGGVAATAEEVQKVAEQI---GGPVAVKAQVHVGGRGKA-------GGIKLANTPAEAFDAGKAILGMDI-------KGLTVEKVLVAEAITFEKEIYLGVILDRATKRVVLIASSEGGVEIEEVAKINPDAIIKLAADPLLGLQPYQAQEL 155
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_RUBXD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=sucC PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.721e-15 Identity = 45/164 (27.44%), Postives = 92/164 (56.10%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 ++++E+QG EL+ ++G+ G+ + +E ++A + + + VK+Q+L GGRG GG+ + + EE E+ A ++LG + +G V ++ + + E+Y + M+DR++ P+I+ ++GG IE++AE+ P IV++ +D G+ Sbjct: 1 MDLYEHQGKELLGRFGLRTLPGVVATTPEEARRAAERL---GGTVAVKAQVLTGGRGKA-------GGIKVAESPEEAEEAARRILGMDI-------RGHTVRRLLIESGADIERELYLSAMVDRESRRPLILFSTEGGVDIEEVAERSPGSIVRLHVDPLVGL 147
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_ROSCS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=sucC PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.720e-14 Identity = 50/176 (28.41%), Postives = 88/176 (50.00%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 + +HEYQ +++A+YG+ V G + E + + + +VVK+Q+ GGRG GGV + E+ E +AG++LG + +G V KV + E ++ E+Y ++DR + +++ ++GG IE++A P IVKV G+ D A + G+ Sbjct: 1 MKLHEYQARDILARYGVPVTGGGVATTPAEARAIAEQI---GGRVVVKAQVFVGGRGKA-------GGVKLADTPEQAEQVAGQILGMNI-------KGLTVEKVLVAEAITYEREIYLGAIMDRASRRIVMMASAEGGVEIEEVARTNPEAIVKVAAHPMLGLLDFQARDLAYGI 159
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_PROAC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Propionibacterium acnes GN=sucC PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.720e-14 Identity = 51/173 (29.48%), Postives = 88/173 (50.87%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVV 835 ++++EYQ +L K+G+ V +G+ + ++ +A + + VK+Q+ GGRG GGV I K E + A +LG + +G V KV + E + E YF+I+LDR + + +GG IE LA++ P + KVP+D +G+ D A +++ Sbjct: 1 MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKL--GTPVVAVKAQVKVGGRGKA-------GGVKIAKSAAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYFSILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREIL 157
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_CHLAB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydophila abortus GN=sucC PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.720e-14 Identity = 50/161 (31.06%), Postives = 84/161 (52.17%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVF 799 +++HEYQ +L+ Y I +P +SV+E + ++ + VVK Q+ AGGRG GGV + K EE+ ++L V+ QT + V KV + +++ E Y A+++DRK P I+ GG IE++A+KYP+ + + + F Sbjct: 1 MHLHEYQAKDLLTSYAIPMPPYRVASSVEEGRHTLNELGINAG--VVKVQVHAGGRGKN-------GGVIVAKSPEEILAAVDQLLHMRFVSNQTSGEALPVEKVLITPLVNIAAEYYLAVIMDRKNRCPTIMLSKAGGVDIEEVAQKYPDQQLTISLTPF 152
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_KOCRD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=sucC PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.934e-14 Identity = 50/174 (28.74%), Postives = 89/174 (51.15%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD 838 +++ EYQ +L K+G+ V G+ + +E K A + + VVK+Q+ GGRG GGV + K EE + A ++LG + +G V +V + + + E YF+++LDR + + +GG IE LA + P+ + +V + +GIT+ A ++V+ Sbjct: 1 MDLFEYQARDLFEKHGVPVLAGIVATTPEEAKAAAEKI---GGVTVVKAQVKVGGRGKA-------GGVKVAKTPEEAYEYAQQILGMDI-------KGHTVHRVMIAQGADIAEEYYFSVLLDRANRSYLAMCSVEGGMEIEQLAVERPDALARVDVSPADGITEAKAREIVE 157
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_CHLAD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=sucC PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.832e-14 Identity = 53/172 (30.81%), Postives = 88/172 (51.16%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 832 + +HEYQ +L+A+YGI V G + E + + +VVK+Q+ GGRG GGV + + E E +AG++LG + +G V KV + E +S E+Y + +LDR + +I ++GG IE++A+ P+ IVK+ G+ D A ++ Sbjct: 1 MKLHEYQARDLLARYGIPVTGGGVAVTPAEAHAIAEQI---GGPVVVKAQVHVGGRGKA-------GGVKLAQTPAEAEQVAGQILGMNI-------KGLTVEKVLVAEAISYERELYLSAILDRGSKRITMIASAEGGVEIEEVAKTNPSAIVKIAAHPTMGLLDFQAREL 155 The following BLAST results are available for this feature:
BLAST of CF832370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832370 ID=CF832370; Name=CF832370; organism=Citrus sinensis; type=EST; length=848bpback to top |