CF832370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_ROSS1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Roseiflexus sp. (strain RS-1) GN=sucC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.005e-14 Identity = 50/176 (28.41%), Postives = 87/176 (49.43%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 + +HEYQ +++A+YGI V G + E + + + +VVK+Q+ GGRG GGV + E+ E +A ++LG + +G V KV + E ++ E+Y ++DR + +++ ++GG IE++A P IVKV G+ D A + G+ Sbjct: 1 MKLHEYQARDILARYGIPVTGGGVATTPAEARTIAEQI---GGRVVVKAQVFVGGRGKA-------GGVKLADTPEQAEQVASQILGMNI-------KGLTVEKVLVAEAITYEREIYLGAIMDRASRRIVMMASAEGGVEIEEVARTNPEAIVKVAAHPMMGLLDFQARDLAYGI 159
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_NOCSJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nocardioides sp. (strain BAA-499 / JS614) GN=sucC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.005e-14 Identity = 53/173 (30.64%), Postives = 89/173 (51.45%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVV 835 +++ EYQ EL AK+ + V G+ + DE + A + + +VVK+Q+ AGGRG GGV + K EE A +LG + +G V++V + S+ E YF+ +LDR + I +GG IE++A+ P+ + ++PID G+ + A ++V Sbjct: 1 MDLMEYQAKELFAKHDVPVTLGIVAHTPDEAQAAAEQL----GVVVVKAQVKAGGRGKA-------GGVKLAKTPEEARTHAEAILGMEI-------KGLRVNRVLIAPAASIEEEYYFSFLLDRANRRYLCIASVEGGVEIEEVAKTNPDAVRQIPIDPGAGVDEAKAREIV 155
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_CHLSY (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=sucC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.005e-14 Identity = 55/173 (31.79%), Postives = 93/173 (53.76%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKG-LAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 832 + +HEYQ +L+A++GI V G +AV V+ A + P +VVK+Q+ GGRG GGV + + E E +A ++LG + +G V KV + E +S E+Y + +LDR + ++I ++GG IE++A+ P+ I+K+P G+ D A ++ Sbjct: 1 MKLHEYQARDLLARFGIPVTGGGVAVTPVEARTIAAEIGGP----VVVKAQVHVGGRGKA-------GGVKLAQTPTEAEQVARQILGMNI-------KGLTVEKVLVAEAVSYKRELYLSAILDRGSKRVMMIASAEGGVEIEEVAKTNPDAIIKIPAHPTMGLLDFQAREL 155
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_CHLAA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=sucC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.005e-14 Identity = 55/173 (31.79%), Postives = 93/173 (53.76%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKG-LAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 832 + +HEYQ +L+A++GI V G +AV V+ A + P +VVK+Q+ GGRG GGV + + E E +A ++LG + +G V KV + E +S E+Y + +LDR + ++I ++GG IE++A+ P+ I+K+P G+ D A ++ Sbjct: 1 MKLHEYQARDLLARFGIPVTGGGVAVTPVEARTIAAEIGGP----VVVKAQVHVGGRGKA-------GGVKLAQTPTEAEQVARQILGMNI-------KGLTVEKVLVAEAVSYKRELYLSAILDRGSKRVMMIASAEGGVEIEEVAKTNPDAIIKIPAHPTMGLLDFQAREL 155
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_NATPD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=sucC PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.536e-14 Identity = 51/172 (29.65%), Postives = 90/172 (52.33%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDV-FPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAK 829 + +HEYQ + A GI VP+ ++VDE +A D+ +P + +K+Q+ GGRG GG+ +V+ +E + A ++LG L +G V +V + + +E+Y + +DR P+ + ++GG +IE++AE+ P+ IV+ ID G+ A K Sbjct: 1 MKLHEYQAKGVFADAGIPVPESTLASTVDEAVEAADDIGYP----VAIKAQVQVGGRGKA-------GGIKLVENADEAREAADEILGMDL-------KGLHVDRVLVEAAVDFTDELYVGVTMDRAAGKPVAMVSTRGGVNIEEVAEEDPDAIVREHIDPAFGMHPFQARK 154
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC2_STRCO (Succinyl-CoA ligase [ADP-forming] subunit beta-2 OS=Streptomyces coelicolor GN=sucC2 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.536e-14 Identity = 49/174 (28.16%), Postives = 86/174 (49.43%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD 838 ++++E+Q EL ++GI VP+ S + ++ + + VVK+Q+ GGRG GGV + E E+ A +LG + +G V V L E + E Y + +LDR + G + I ++GGT IE++A + P + ++P+D G+ A ++ D Sbjct: 1 MDLYEHQARELFKEHGIVVPRAEVTDSPERAREIARAL---GGRAVVKAQVKTGGRGKA-------GGVRLAADPAEAEEAARHILGMDI-------RGHTVDTVMLAEPCEIEREFYVSYVLDRASGGFLAIASAEGGTEIEEVAARRPEAVARIPVDPATGVHTATAVRIAD 157
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_CHLMU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydia muridarum GN=sucC PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.537e-14 Identity = 48/158 (30.38%), Postives = 83/158 (52.53%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPI 790 +++HEYQ +L+ Y + +P S+ E + A Q + VVK+Q+ AGGRG GGV + + E++ ++L + QT V+KV + + + E Y AI++DRK P+I+ GG IE++AEK P++++K+ + Sbjct: 1 MHLHEYQAKDLLTSYQLPIPPYHVATSLSEAEVAIQA--EQWRSGVVKAQVHAGGRGKN-------GGVIVARSPEDLLAATDRLLHMQFSSNQTAGLSLPVNKVLISPLVEIALEYYIAIVIDRKHRCPVIMLSKSGGIDIEEIAEKQPDLLLKIAL 149
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_CORGL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Corynebacterium glutamicum GN=sucC PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.456e-13 Identity = 49/173 (28.32%), Postives = 88/173 (50.87%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVV 835 +++ EYQ +L +G+ V KG+ ++ + +KA +++ VVK+Q+ GGRG GGV + + D A +LG + +G V++V + + + E YF+I+LDR + + +GG IE LA++ P + KV +D GI ++ A ++V Sbjct: 1 MDLFEYQARDLFETHGVPVLKGIVASTPEAARKAAEEI---GGLTVVKAQVKVGGRGKA-------GGVRVAPTSAQAFDAADAILGMDI-------KGHTVNQVMVAQGADIAEEYYFSILLDRANRSYLAMCSVEGGMEIEILAKEKPEALAKVEVDPLTGIDEDKAREIV 156
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_METTH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Methanobacterium thermoautotrophicum GN=sucC PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.902e-13 Identity = 47/163 (28.83%), Postives = 82/163 (50.31%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKV---PIDVF 799 + +EY E+ GI+ P+G + +E ++ ++ D + VKSQ+L GGRG GG+ V ++ G +L + +G+ V KV + EK+ + E+Y + ++DR P+I+ ++GG IE+LA + P IV+ P+D F Sbjct: 1 MKFYEYSAKEIFRAEGISTPRGGVAETPEEAERIAAELGCD---VAVKSQVLTGGRGKA-------GGIRFASPSGVAEVTGDLLSSEV-------RGETVEKVLIEEKIPIDRELYVSAVIDRTAKMPLIMASAEGGVDIEELAARSPEKIVRYHINPLDEF 146
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_HALLT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=sucC PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.902e-13 Identity = 50/174 (28.74%), Postives = 89/174 (51.15%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDV-FPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVV 835 + +HE+Q + A GI VP +VDE A ++ +P +K+Q+ GGRG GG+ I ++E E A ++LG L +G V ++ + + + V+E+Y + +DR P+++ ++GG +IE++AE+ P+ I + +D G+ A KVV Sbjct: 1 MKLHEHQAKTIFADAGIPVPDSRLATTVDEALDAVDEIGYP----AAIKAQVHVGGRGKA-------GGIKIATDRDEAEQYAEEILGMDL-------KGYTVDQILVEQGVDFVDELYVGVTMDRGEGQPVLMVSTEGGVNIEEVAEENPDAIAREHVDPAFGLHPYQARKVV 156 The following BLAST results are available for this feature:
BLAST of CF832370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832370 ID=CF832370; Name=CF832370; organism=Citrus sinensis; type=EST; length=848bpback to top |