CF832370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_EXIS2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=sucC PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27 Identity = 70/172 (40.70%), Postives = 105/172 (61.05%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 832 +N+HEYQ EL+ YG+ VP G+A +V+E A + + K VVK+QI AGGRG GGV + K +EEV++ A ++LG+ LVT QTGP+GK++ ++ + E ++ E Y I+LDR T +I+G S+GG IE++AE P I+K +D G+ A K+ Sbjct: 1 MNVHEYQAKELLRSYGVPVPNGIAAFTVEEAVDAAEQLSGPIK--VVKAQIHAGGRGKA-------GGVKLAKSQEEVKEFATELLGKTLVTHQTGPEGKVIQRLLVEEGCAIDKEYYLGIVLDRVTGRVVIMGSSEGGMDIEEVAEATPEKIIKEVVDPAVGLQAFQARKL 163
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BURS3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia sp. (strain 383) GN=sucC PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27 Identity = 68/169 (40.24%), Postives = 106/169 (62.72%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDA 823 + IHEYQG E++ K+G+ VP+G SVDE K +++ VVK+QI AGGRG G GGV + K E+V + A ++LG LVT QTGP+G+ V+++ + E + E+Y ++++DR T +++G S+GG IE++AEK+P +I KV ++ G+ D A Sbjct: 1 MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEEL--GGPVWVVKAQIHAGGRGKG-------GGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLMVEEGADIKQELYVSLVVDRVTQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQA 160
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BACLD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=sucC PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27 Identity = 72/172 (41.86%), Postives = 102/172 (59.30%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 832 +NIHEYQG E++ KYG+ VP+G + DE KA + + VVK+QI AGGRG GGV I K KEEV+ A ++LG+ LVT QTGP G+ + ++ + E + E Y ++LDR T+ +++ +GGT IE++AEK P IVK ID G+ A K+ Sbjct: 1 MNIHEYQGKEVLRKYGVAVPEGKVAFTADEAVKAAEAL--SSSVYVVKAQIHAGGRGKA-------GGVKIAKSKEEVKAYAEELLGKTLVTHQTGPDGQQIKRLLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKEVIDPAVGLQSYQARKI 163
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_AZOSB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Azoarcus sp. (strain BH72) GN=sucC PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27 Identity = 72/176 (40.91%), Postives = 104/176 (59.09%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 + IHEYQ E++ KYG+ P+G+ SVDE KA +++ K VVK+QI AGGRG G GGV + K +EV LAG++LG LVT QTGP+G+ V ++ + E + E Y A + DR T ++ S+GG IE++A P I+KV +D G+TD A ++ G+ Sbjct: 1 MKIHEYQAKEVLRKYGVVTPRGIPCFSVDEAVKAAEEL--GGKIWVVKAQIHAGGRGKG-------GGVKLGKSLDEVRTLAGQILGMQLVTHQTGPEGQKVRRLLIEEGADIKKEYYVAALTDRATQKVAMMASSEGGMDIEEVAHNTPEKIIKVFVDPLAGLTDAQAIELAKGI 167
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_ACICJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidiphilium cryptum (strain JF-5) GN=sucC PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27 Identity = 73/178 (41.01%), Postives = 107/178 (60.11%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGL--KGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ EL+ YG+ V G + +E +A + + VVKSQI AGGRG G FK KGGV + K EEV A MLG LVTKQTGP G++V +VY+ + E+Y ++++DR + +I+ ++GG IE++AEK+P I++V +D +GI+ A ++ GL Sbjct: 1 MNIHEYQAKELLKSYGVAVLDGHVAWTGEEAAEAARKL--PGPVYVVKSQIHAGGRGAGHFKDDPEGKGGVRLAKSPEEVAAAAEAMLGNTLVTKQTGPAGRVVRRVYVEAGCDIKRELYLSLLVDRAKSEIVIMASTEGGMEIEEVAEKHPEKILRVAVDPASGISGFHARRLGFGL 176
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_SINMW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sinorhizobium medicae (strain WSM419) GN=sucC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.772e-27 Identity = 74/179 (41.34%), Postives = 103/179 (57.54%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ YG V +G+A+ S DE A + + VVKSQI AGGRG G FK + KGGV + K +EV A +MLG LVTKQTGP GK V+++Y+ + + E+Y +I++DR + ++GG IE +AE P IV V ID G+T +D + + L Sbjct: 1 MNIHEYQAKALLKSYGAPVAEGVAIFSADEAAAAAKKL--PGPLYVVKSQIHAGGRGKGKFKELGADAKGGVRLAKSADEVVAHAREMLGNTLVTKQTGPSGKQVNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPDKGVTADDLKTLTEAL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_RHIME (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhizobium meliloti GN=sucC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.772e-27 Identity = 75/179 (41.90%), Postives = 102/179 (56.98%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ YG V +G+A+ S DE + A + + VVKSQI AGGRG G FK KGGV + K +EV A MLG LVTKQTGP GK V+++Y+ + + E+Y +I++DR + ++GG IE +AE P IV V ID G+T E+ + D L Sbjct: 1 MNIHEYQAKALLKSYGAPVAEGVAIFSADEAEAAAKKL--PGPLYVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSVDEVVANAKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPEKGVTAENLKTLADAL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_PROVI (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=sucC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.772e-27 Identity = 65/166 (39.16%), Postives = 105/166 (63.25%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKE--LVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +NIHEYQG +++ K+G+ VPKG+ S +E K+A + +F + +VVK+QI AGGRG GGV + K EE ++A +M+G LVT QTGP+GK V ++ + E +++ E Y I LDR T+ +++ ++GG IE +AE+ P+ ++K+ +D G+ Sbjct: 1 MNIHEYQGKDILRKFGVAVPKGIVAHSPEEAKQAAEQLFEEQSSPVVVVKAQIHAGGRGKA-------GGVKLAKSPEEAYEIASQMIGTTLVTHQTGPEGKEVRRLLVEEGMNIDREFYVGITLDRATSQNVLMISTEGGMEIEKVAEETPDRLLKIQVDPLFGL 159
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_MYXXD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Myxococcus xanthus (strain DK 1622) GN=sucC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.772e-27 Identity = 70/176 (39.77%), Postives = 103/176 (58.52%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 + IHEYQG E+ KYG+ PKG+ S ++ + A +++ +VVK+QI AGGRG G GGV + K E ++LA +MLG L T QTGP+G+ V KVY+ E L++ E+Y + LDR T+ + +GG IE++AEK+P I++ +D G D K+ GL Sbjct: 1 MKIHEYQGKEIFRKYGVPTPKGILAVSANDAEAAAKEL--GTSVVVVKAQIHAGGRGKG-------GGVKLAKSPAEAKELAKQMLGMKLKTIQTGPEGQTVHKVYIEEGLAIGQELYLGVTLDRATSRITFMASREGGVEIEEVAEKHPEKILRESVDPAVGFQDFQGRKLAFGL 167
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_LEPBA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=sucC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.772e-27 Identity = 68/164 (41.46%), Postives = 100/164 (60.98%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 + +HEYQ E++ ++ NVP G + +V + +KA +V +VVK+QI AGGRG G GGV + K K++ + A K+LG L+T QTGP+GK V KVYL + L + E Y +I+LDR II+ ++GG IE++AE +P I+K+ ID GI Sbjct: 1 MKVHEYQAKEILRRHNANVPFGKVIDAVGDFEKAYNEVVQKSPVVVVKAQIHAGGRGKG-------GGVKVAKTKDDAKAAAEKILGMQLITPQTGPEGKKVLKVYLEQGLEIAKEYYLSILLDRAIRKTIIMASTEGGMEIEEVAETHPEKIIKIQIDPGIGI 157 The following BLAST results are available for this feature:
BLAST of CF832370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832370 ID=CF832370; Name=CF832370; organism=Citrus sinensis; type=EST; length=848bpback to top |