CF832370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_CAUCR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Caulobacter crescentus GN=sucC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.959e-26 Identity = 67/167 (40.12%), Postives = 101/167 (60.48%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +NIHE+Q ++A++G VP+G A + DE A + + VVKSQI AGGRG G F+ KGGV +VK EEV A +MLG++LVT QTGP+GK V+++Y+ E ++ E Y ++++DR ++ ++ ++GG IED+A P I ID G+ Sbjct: 1 MNIHEHQAKAVLAEFGAPVPRGFAAFTPDEAAAAAEKL--GGPVFVVKSQIHAGGRGKGKFEGLGPDAKGGVRVVKSVEEVRSNAEEMLGRVLVTHQTGPKGKQVNRLYIEEGAAIAKEFYLSLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPATGV 165
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_CAUCN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=sucC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.959e-26 Identity = 67/167 (40.12%), Postives = 101/167 (60.48%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +NIHE+Q ++A++G VP+G A + DE A + + VVKSQI AGGRG G F+ KGGV +VK EEV A +MLG++LVT QTGP+GK V+++Y+ E ++ E Y ++++DR ++ ++ ++GG IED+A P I ID G+ Sbjct: 1 MNIHEHQAKAVLAEFGAPVPRGFAAFTPDEAAAAAEKL--GGPVFVVKSQIHAGGRGKGKFEGLGPDAKGGVRVVKSVEEVRSNAEEMLGRVLVTHQTGPKGKQVNRLYIEEGAAIAKEFYLSLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPATGV 165
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BACA2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus amyloliquefaciens (strain FZB42) GN=sucC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.959e-26 Identity = 66/172 (38.37%), Postives = 103/172 (59.88%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 832 +NIHEYQG E++ KYG++VP+G + +E + + + VVK+QI AGGRG GGV I K K+EV++ A ++LG+ LVT QTGP G+++ ++ + E + E Y ++LDR T+ +++ +GGT IE++AEK P I K ID G+ A ++ Sbjct: 1 MNIHEYQGKEVLRKYGVSVPEGKVAFTAEEAVEKAESL--SSSVYVVKAQIHAGGRGKA-------GGVKIAKTKDEVKEYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREI 163
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_NITSB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nitratiruptor sp. (strain SB155-2) GN=sucC PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.558e-26 Identity = 71/176 (40.34%), Postives = 101/176 (57.39%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ E+ +YG+ VP+G + E ++ Q + D VVK+QI AGGRG GGV + + +EVE +A +MLG LVT QTGP+GK V KVY+ E + E Y ++LDR + P+++ ++GG IE++A K P I+KV ID G K+ GL Sbjct: 1 MNIHEYQAKEIFREYGVPVPRGEVAFTGPEAREVAQRLGGDL--WVVKAQIHAGGRGKA-------GGVKLARSLDEVEKIAEEMLGMTLVTHQTGPEGKKVEKVYVEEGADIQKEYYLGMVLDRSSEMPVMMASTEGGMEIEEVAAKTPEKIIKVAIDPTIGFQGFHGRKLAFGL 167
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BACHD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus halodurans GN=sucC PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.558e-26 Identity = 70/172 (40.70%), Postives = 101/172 (58.72%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 832 +NIHEYQG EL+ +YG+ VP G SVDE +A +++ VVK+QI AGGRG GGV + K +EV A ++LG+ LVT QTGP+GK V ++ + E + E Y ++LDR T+ +++ +GGT IE++AEK P I K ID G+ A ++ Sbjct: 1 MNIHEYQGKELLRQYGVAVPNGKVAFSVDEAVEAAKEL--GSNVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYADEILGKTLVTHQTGPEGKEVKRLLIEEGCDIQKEYYVGLVLDRATSRVVMMASEEGGTEIEEVAEKTPEKIFKEIIDPVVGLQGFQARRL 163
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BORPE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bordetella pertussis GN=sucC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.341e-26 Identity = 70/176 (39.77%), Postives = 104/176 (59.09%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 + IHEYQG EL+ ++G+ VP+G+ SVDE A + + VVK+QI AGGRG G GGV + + +EV L+ ++LG LVT QTGPQG+ V ++ + E + E Y I+ DR T ++ S+GG IE++A P I+KV +D G+TD +AA++ G+ Sbjct: 1 MKIHEYQGKELLKQFGVTVPRGIPAFSVDEAVAAAEKL--GGPVWVVKAQIHAGGRGKG-------GGVKLGRSIDEVRQLSSEILGMQLVTHQTGPQGQKVRRLLIEEGADIKKEYYVGIVTDRGTQRVCVMASSEGGMDIEEVAAHSPEKILKVFVDPAAGLTDAEAAELARGI 167
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BORPA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bordetella parapertussis GN=sucC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.341e-26 Identity = 70/176 (39.77%), Postives = 104/176 (59.09%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 + IHEYQG EL+ ++G+ VP+G+ SVDE A + + VVK+QI AGGRG G GGV + + +EV L+ ++LG LVT QTGPQG+ V ++ + E + E Y I+ DR T ++ S+GG IE++A P I+KV +D G+TD +AA++ G+ Sbjct: 1 MKIHEYQGKELLKQFGVTVPRGIPAFSVDEAVAAAEKL--GGPVWVVKAQIHAGGRGKG-------GGVKLGRSIDEVRQLSSEILGMQLVTHQTGPQGQKVRRLLIEEGADIKKEYYVGIVTDRGTQRVCVMASSEGGMDIEEVAAHSPEKILKVFVDPAAGLTDAEAAELARGI 167
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BORBR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bordetella bronchiseptica GN=sucC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.341e-26 Identity = 70/176 (39.77%), Postives = 104/176 (59.09%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 + IHEYQG EL+ ++G+ VP+G+ SVDE A + + VVK+QI AGGRG G GGV + + +EV L+ ++LG LVT QTGPQG+ V ++ + E + E Y I+ DR T ++ S+GG IE++A P I+KV +D G+TD +AA++ G+ Sbjct: 1 MKIHEYQGKELLKQFGVTVPRGIPAFSVDEAVAAAEKL--GGPVWVVKAQIHAGGRGKG-------GGVKLGRSIDEVRQLSSEILGMQLVTHQTGPQGQKVRRLLIEEGADIKKEYYVGIVTDRGTQRVCVMASSEGGMDIEEVAAHSPEKILKVFVDPAAGLTDAEAAELARGI 167
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_ALKMQ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alkaliphilus metalliredigens (strain QYMF) GN=sucC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.341e-26 Identity = 69/172 (40.12%), Postives = 104/172 (60.47%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 832 +NIHEYQG E+M +YGI+VP+ +V+E +A D+ + + VK+QI AGGRG GGV I + EE + A +L +IL+TKQTGP+GK+V++V + E L + E Y + +D T+ ++IG +GG IE++AEK P+ I K ID G+ A ++ Sbjct: 1 MNIHEYQGKEIMKQYGISVPRSRITFTVEEAVQAAIDL--GCEVIAVKAQIHAGGRGKA-------GGVKITRSLEETKSAAEAILDKILITKQTGPEGKVVNQVLIEEGLKIEKECYLSCAVDSTTSTVVLIGSPEGGMDIEEVAEKTPHKIFKESIDPAIGLQQYQARRL 163
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_NITHX (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=sucC PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.364e-26 Identity = 69/179 (38.55%), Postives = 101/179 (56.42%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ ++G+ V +G+ V E + A + + VVKSQI AGGRG G FK +G KGGV + K +EV+ A +MLG LVT QTGP GK V+++Y+ E + E Y + ++DR+T+ + ++GG +IED+A P IV +D G+ V L Sbjct: 1 MNIHEYQAKALLREFGVPVSRGVPVLKASEAEAAAETL--GGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVKQFASQMLGATLVTVQTGPAGKQVNRLYIEEGSDIDKEFYLSALVDRETSRVAFVVSTEGGVNIEDVAHTSPEKIVSFSVDPATGVMSHHGRTVAKAL 177 The following BLAST results are available for this feature:
BLAST of CF832370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832370 ID=CF832370; Name=CF832370; organism=Citrus sinensis; type=EST; length=848bpback to top |