CF832371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_ALKOO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alkaliphilus oremlandii (strain OhILAs) GN=sucC PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 8.496e-48 Identity = 95/140 (67.86%), Postives = 113/140 (80.71%), Query Frame = -2 Query: 268 QEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 687 +ED +E+ A+K +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLDVGG ASE +V+ AFKI+ SD KV I VNIFGGIMKCDVIA GIVNAA +V L VP+VVRLEGTNV+ G IL +S + ++TA + D Sbjct: 237 EEDEKEIEASKYNLSYISLDGNIGCMVNGAGLAMATMDIIKLYGGNPANFLDVGGGASEEKVMNAFKIILSDPKVKGIFVNIFGGIMKCDVIAKGIVNAANEVKLNVPLVVRLEGTNVELGKEILNQSNLNIVTATTMAD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_AGRRK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=sucC PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 8.496e-48 Identity = 93/141 (65.96%), Postives = 116/141 (82.27%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 ++ED +E+ A + DL Y+ LDG IGCMVNGAGLAMATMDIIKL+G PANFLDVGG A++ +V AFKI+T+D V ILVNIFGGIMKCDVIA G++ A K+V LKVP+VVRLEGTNV+ G +I+ ESG+ +I+A+DLDD Sbjct: 246 SEEDEKEIQAHEYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTAAFKIITADPAVQGILVNIFGGIMKCDVIAEGVLAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_PHOLL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Photorhabdus luminescens subsp. laumondii GN=sucC PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.110e-47 Identity = 91/142 (64.08%), Postives = 113/142 (79.58%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+QEDPRE AA+ +LNY+ LDG IGCMVNGAGLAM TMDI+KLHGG PANFLDVGG A++ +V EAFKI+ SDE V A+LVNIFGGI++CD+IA GI+ A ++V + VPVVVRLEG N + G + L +SG+ +I A L D Sbjct: 235 PSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVGGGATKERVTEAFKIILSDENVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVHVPVVVRLEGNNAELGAKKLADSGLNIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_BACLD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=sucC PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.110e-47 Identity = 93/140 (66.43%), Postives = 113/140 (80.71%), Query Frame = -2 Query: 268 QEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 687 +EDP+E+ A+K DL+YI LDG IGCMVNGAGLAM+TMDIIK +GG PANFLDVGG A+ +V EAFKI+ SD+ V I VNIFGGIMKCDVIA G+V A KQV L +P+VVRLEGTNVD G +IL +SG+ + +AE + D Sbjct: 237 EEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFLDVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLVVRLEGTNVDLGKKILDDSGLNITSAESMAD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_RHORT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=sucC PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.449e-47 Identity = 94/140 (67.14%), Postives = 115/140 (82.14%), Query Frame = -2 Query: 268 QEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 687 +EDP E+ A+K DLNYI LDG IGCMVNGAGLAMATMDIIKL GG PANFLDVGG A+ +V AFKI+ SD V ILVNIFGGIM+CDVIA G++ AA++V+L VP+VVRLEGTNV+ G +I+ ESG+ +I+A++L D Sbjct: 247 EEDPMELEASKHDLNYIKLDGSIGCMVNGAGLAMATMDIIKLKGGAPANFLDVGGGATRERVTAAFKIILSDPNVDGILVNIFGGIMRCDVIAEGVIAAAREVSLNVPLVVRLEGTNVELGKKIMVESGLPIISADNLAD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_PSEPW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain W619) GN=sucC PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.449e-47 Identity = 90/142 (63.38%), Postives = 112/142 (78.87%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+D RE AAK +LNY+ L+G IGCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEG N + G ++L ESG+ +I A L D Sbjct: 235 PSQDDAREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGNNAELGAKVLAESGLNIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_PSEPK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain KT2440) GN=sucC PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.449e-47 Identity = 90/142 (63.38%), Postives = 112/142 (78.87%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+D RE AAK +LNY+ L+G IGCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEG N + G ++L ESG+ +I A L D Sbjct: 235 PSQDDAREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGNNAELGAKVLAESGLNIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_PSEP1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=sucC PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.449e-47 Identity = 90/142 (63.38%), Postives = 112/142 (78.87%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+D RE AAK +LNY+ L+G IGCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEG N + G ++L ESG+ +I A L D Sbjct: 235 PSQDDAREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGNNAELGAKVLAESGLNIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_PSEE4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas entomophila (strain L48) GN=sucC PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.449e-47 Identity = 90/142 (63.38%), Postives = 112/142 (78.87%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+D RE AAK +LNY+ L+G IGCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEG N + G ++L ESG+ +I A L D Sbjct: 235 PSQDDAREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGNNAELGAKVLAESGLNIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_AZOVD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=sucC PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.449e-47 Identity = 91/142 (64.08%), Postives = 113/142 (79.58%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+DPREV AAK +LNY+ L+G IGCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD KV A+LVNIFGGI++CD+IA GI+ A ++V +KVPVVVRLEG N + G +L SG+ +I A L D Sbjct: 235 PSQDDPREVHAAKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGRPANFLDVGGGATKERVTEAFKIILSDAKVKAVLVNIFGGIVRCDMIAEGIIGAVREVGVKVPVVVRLEGNNAELGAEMLARSGLNIIPASTLTD 376 The following BLAST results are available for this feature:
BLAST of CF832371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832371 ID=CF832371; Name=CF832371; organism=Citrus sinensis; type=EST; length=694bpback to top |