CF832371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_ALTMD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=sucC PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.449e-47 Identity = 90/142 (63.38%), Postives = 113/142 (79.58%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+QED RE AA+ +LNY+ LDG +GCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD+ V A+LVNIFGGI++CD+IA GI+ A K+V ++VPVVVRLEGTN + G +L SG+ +I AE L D Sbjct: 235 PSQEDAREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLEGTNAELGREVLANSGLDIIAAESLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_SHEFN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella frigidimarina (strain NCIMB 400) GN=sucC PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.893e-47 Identity = 90/142 (63.38%), Postives = 112/142 (78.87%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+D RE AAK +LNY+ LDG +GCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEGTN + G +L +SG+ +I A L D Sbjct: 235 PSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGTNAELGREVLAKSGLDIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_SHEDO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=sucC PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.893e-47 Identity = 90/142 (63.38%), Postives = 112/142 (78.87%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+D RE AAK +LNY+ LDG +GCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEGTN + G +L +SG+ +I A L D Sbjct: 235 PSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGTNAELGREVLAKSGLDIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_SHEB9 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella baltica (strain OS195) GN=sucC PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.893e-47 Identity = 90/142 (63.38%), Postives = 112/142 (78.87%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+D RE AAK +LNY+ LDG +GCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEGTN + G +L +SG+ +I A L D Sbjct: 235 PSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGTNAELGREVLAKSGLDIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_SHEB8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella baltica (strain OS185) GN=sucC PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.893e-47 Identity = 90/142 (63.38%), Postives = 112/142 (78.87%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+D RE AAK +LNY+ LDG +GCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEGTN + G +L +SG+ +I A L D Sbjct: 235 PSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGTNAELGREVLAKSGLDIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_SHEB5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=sucC PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.893e-47 Identity = 90/142 (63.38%), Postives = 112/142 (78.87%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+D RE AAK +LNY+ LDG +GCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEGTN + G +L +SG+ +I A L D Sbjct: 235 PSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGTNAELGREVLAKSGLDIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_SHEB2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella baltica (strain OS223) GN=sucC PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.893e-47 Identity = 90/142 (63.38%), Postives = 112/142 (78.87%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+D RE AAK +LNY+ LDG +GCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEGTN + G +L +SG+ +I A L D Sbjct: 235 PSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGTNAELGREVLAKSGLDIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_RHOP5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodopseudomonas palustris (strain BisA53) GN=sucC PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.893e-47 Identity = 91/141 (64.54%), Postives = 118/141 (83.69%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+ED +E+ A+K +L YI L+G IGCMVNGAGLAMAT+DIIKL+G +PANFLDVGG A+E +V AFKI+T+D V ILVNIFGGIMKCDVIA G++ A K V L+VP+VVRLEGTNV++G I+++SG+ +++A+DLDD Sbjct: 246 TEEDAKEIEASKHELAYIALEGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVGGGATEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIARGVIAAVKTVGLEVPLVVRLEGTNVEEGKAIIRDSGLNVLSADDLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_HALHL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=sucC PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.893e-47 Identity = 96/141 (68.09%), Postives = 113/141 (80.14%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQED EV AA+ +LNYI LDG IGCMVNGAGLAMATMD+IKLHGG PANFLDVGG + +V EAFKI+ S V ILVNIFGGI++CD+IA GIV A + V ++VPVVVRLEGTNV+QG +IL +SG+ LI A+DL D Sbjct: 238 TQEDETEVRAAEHNLNYITLDGNIGCMVNGAGLAMATMDVIKLHGGAPANFLDVGGGTNAERVAEAFKIILSSPSVEGILVNIFGGIVRCDMIAEGIVAAVQDVGVEVPVVVRLEGTNVEQGKQILADSGLDLIPADDLAD 378
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_PSEMY (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas mendocina (strain ymp) GN=sucC PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.472e-47 Identity = 88/142 (61.97%), Postives = 113/142 (79.58%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+DPRE A K +LNY+ L+G IGCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD+ V A+LVNIFGGI++CD+IA GI+ A K+V +K+PVVVRLEG N + G ++L +SG+ +I A L D Sbjct: 235 PSQDDPREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVGGGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLEGNNAELGAKVLADSGLNIIAATSLTD 376 The following BLAST results are available for this feature:
BLAST of CF832371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832371 ID=CF832371; Name=CF832371; organism=Citrus sinensis; type=EST; length=694bpback to top |