CF832371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_RHOSK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=sucC PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.075e-50 Identity = 96/141 (68.09%), Postives = 118/141 (83.69%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+EDP+E+AA+K DLNYI LDGEIGCMVNGAGLAMATMDIIKL+G PANFLDVGG A++ +V EAFKI+TSD V ILVNIFGGIM+CD+IA GI+ A K+V L+VP+VVRLEGTNV++G I+ SG+ +I ++L D Sbjct: 246 TEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDIIAEGIIAAVKEVGLQVPLVVRLEGTNVEKGKEIIANSGLNVIAGDNLSD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_RHOS5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=sucC PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.075e-50 Identity = 96/141 (68.09%), Postives = 118/141 (83.69%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+EDP+E+AA+K DLNYI LDGEIGCMVNGAGLAMATMDIIKL+G PANFLDVGG A++ +V EAFKI+TSD V ILVNIFGGIM+CD+IA GI+ A K+V L+VP+VVRLEGTNV++G I+ SG+ +I ++L D Sbjct: 246 TEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDIIAEGIIAAVKEVGLQVPLVVRLEGTNVEKGKEIIANSGLNVIAGDNLSD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_RHOS4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=sucC PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.075e-50 Identity = 96/141 (68.09%), Postives = 118/141 (83.69%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+EDP+E+AA+K DLNYI LDGEIGCMVNGAGLAMATMDIIKL+G PANFLDVGG A++ +V EAFKI+TSD V ILVNIFGGIM+CD+IA GI+ A K+V L+VP+VVRLEGTNV++G I+ SG+ +I ++L D Sbjct: 246 TEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDIIAEGIIAAVKEVGLQVPLVVRLEGTNVEKGKEIIANSGLNVIAGDNLSD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_RHOS1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=sucC PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.075e-50 Identity = 96/141 (68.09%), Postives = 118/141 (83.69%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+EDP+E+AA+K DLNYI LDGEIGCMVNGAGLAMATMDIIKL+G PANFLDVGG A++ +V EAFKI+TSD V ILVNIFGGIM+CD+IA GI+ A K+V L+VP+VVRLEGTNV++G I+ SG+ +I ++L D Sbjct: 246 TEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDIIAEGIIAAVKEVGLQVPLVVRLEGTNVEKGKEIIANSGLNVIAGDNLSD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCB1_MOUSE (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Mus musculus GN=Sucla2 PE=1 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 4.075e-50 Identity = 95/141 (67.38%), Postives = 117/141 (82.98%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 +QED R+ AA AD+NYIGLDG IGC+VNGAGLAMATMDIIKLHGGTPANFLDVGG A+ QV EAFK++TSD+KV AILVNIFGGIM+CDVIA GIV A K + +++PVVVRL+GT VD ++ +SG+ ++ +DLD+ Sbjct: 295 SQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALIADSGLKILACDDLDE 435
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCB1_DICDI (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Dictyostelium discoideum GN=scsC PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.075e-50 Identity = 95/141 (67.38%), Postives = 123/141 (87.23%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 +QEDPREV AA+ DLNYIGLDG IGC+VNGAGLAMA+MDIIKL+GG+PANFLDVGG A++ QV EA K+++SD+KV +ILVNIFGGIMKCDVIA GI+ A K++++ P+VVRL+GTNV+ +I+++SG+ LI A++LDD Sbjct: 277 SQEDPREVKAAEFDLNYIGLDGNIGCLVNGAGLAMASMDIIKLYGGSPANFLDVGGGATQKQVTEAIKLISSDKKVKSILVNIFGGIMKCDVIALGIIAALKELSIATPLVVRLQGTNVEAAKKIMEDSGLRLIAADNLDD 417
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_SINMW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sinorhizobium medicae (strain WSM419) GN=sucC PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.321e-50 Identity = 96/141 (68.09%), Postives = 118/141 (83.69%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+ED +E+ A+K DL Y+ LDG IGCMVNGAGLAMATMDIIKL+G PANFLDVGG AS+ +V +AFKI+T+D V ILVNIFGGIMKCDVIA G++ A K+V LKVP+VVRLEGTNV+ G +I+ ESG+ +I+A+DLDD Sbjct: 246 TEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTQAFKIITADPAVKGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_RHOPB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodopseudomonas palustris (strain BisB18) GN=sucC PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.321e-50 Identity = 95/141 (67.38%), Postives = 119/141 (84.40%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+ED +E+ A+K DLNY+ LDG IGCMVNGAGLAMATMDIIKL+G TPANFLDVGG A++ +V AFKI+T+D V IL+NIFGGIMKCD+IA G+V A K V LKVP+VVRLEGTNV+ G +I++ESG+ +++A+DLDD Sbjct: 246 TEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMTPANFLDVGGGANKEKVTAAFKIITADPNVKGILINIFGGIMKCDIIAEGVVAAVKDVGLKVPLVVRLEGTNVEAGKKIIQESGLNVLSADDLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_OLICO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=sucC PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.321e-50 Identity = 97/141 (68.79%), Postives = 119/141 (84.40%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+ED +E+ A+K DL YI LDG IGCMVNGAGLAMAT+DIIKL+G +PANFLDVGG ASE +V AFKI+T+D V ILVNIFGGIMKCDVIA+G+V A K V LKVP+VVRLEGTNV++G +I++ESG+ ++ A+DLDD Sbjct: 246 TEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVGGGASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIAAGVVAAVKAVGLKVPLVVRLEGTNVEEGKKIIRESGLNVLPADDLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_GEOTN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus thermodenitrificans (strain NG80-2) GN=sucC PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.321e-50 Identity = 100/140 (71.43%), Postives = 114/140 (81.43%), Query Frame = -2 Query: 268 QEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 687 +EDP+EV A+K DLNYI LDG IGCMVNGAGLAMATMDIIK +GG PANFLDVGG ASE +V EAFKI+ SD V I VNIFGGIMKCDVIASGIV A KQV L +P+VVRLEGTNV+ G +IL+ESG+ + AE + D Sbjct: 237 EEDPKEVEASKYDLNYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVGGGASEEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIASGIVAATKQVGLTLPLVVRLEGTNVELGKKILQESGLNITAAESMAD 376 The following BLAST results are available for this feature:
BLAST of CF832371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832371 ID=CF832371; Name=CF832371; organism=Citrus sinensis; type=EST; length=694bpback to top |