CF832371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_CAUCR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Caulobacter crescentus GN=sucC PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.684e-49 Identity = 94/141 (66.67%), Postives = 116/141 (82.27%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 ++EDP+E+ A+K DL YI LDGEIGCMVNGAGLAMATMDIIKL+G PANFLDVGG AS+ +V AFKI+T+D V ILVNIFGGIM+CD+IA G++ A K+V L+VP+VVRLEGTNV+ G +I+ ESG+ +I A DL D Sbjct: 246 SEEDPKEIEASKYDLAYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTAAFKIITADPAVKGILVNIFGGIMRCDIIAEGVIAAVKEVGLQVPLVVRLEGTNVELGKKIISESGLNVIAANDLSD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_CAUCN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=sucC PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.684e-49 Identity = 94/141 (66.67%), Postives = 116/141 (82.27%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 ++EDP+E+ A+K DL YI LDGEIGCMVNGAGLAMATMDIIKL+G PANFLDVGG AS+ +V AFKI+T+D V ILVNIFGGIM+CD+IA G++ A K+V L+VP+VVRLEGTNV+ G +I+ ESG+ +I A DL D Sbjct: 246 SEEDPKEIEASKYDLAYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTAAFKIITADPAVKGILVNIFGGIMRCDIIAEGVIAAVKEVGLQVPLVVRLEGTNVELGKKIISESGLNVIAANDLSD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_BARQU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella quintana GN=sucC PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.684e-49 Identity = 93/141 (65.96%), Postives = 117/141 (82.98%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 ++EDP+E+ A+K DL Y+ L+G IGCMVNGAGLAMATMDIIKL+G PANFLDVGG AS+ +V AFKI+T+D V ILVNIFGGIM+CDVIA G+V A ++V LKVP+VVRLEGTN++QG I+ +SG+ +I+A DLDD Sbjct: 246 SEEDPKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLEGTNIEQGKAIISDSGLNVISASDLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_VIBVY (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio vulnificus (strain YJ016) GN=sucC PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.004e-48 Identity = 92/142 (64.79%), Postives = 114/142 (80.28%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+QED RE AA+ +LNY+ LDG +GCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD+ V A+LVNIFGGI++CD+IA GI+ A K+V + VPVVVRLEGTN D G ++L ESG+ +I AE L D Sbjct: 235 PSQEDKREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLEGTNADLGRKVLAESGLDIIAAESLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_VIBVU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio vulnificus GN=sucC PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.004e-48 Identity = 92/142 (64.79%), Postives = 114/142 (80.28%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+QED RE AA+ +LNY+ LDG +GCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD+ V A+LVNIFGGI++CD+IA GI+ A K+V + VPVVVRLEGTN D G ++L ESG+ +I AE L D Sbjct: 235 PSQEDKREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLEGTNADLGRKVLAESGLDIIAAESLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_RHOPT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodopseudomonas palustris (strain TIE-1) GN=sucC PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.311e-48 Identity = 94/141 (66.67%), Postives = 117/141 (82.98%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+ED +E+ A+K DLNY+ LDG IGCMVNGAGLAMATMDIIKL+G +PANFLDVGG AS+ +V AFKI+T+D V IL+NIFGGIMKCDVIA G+V A K+V L VP+VVRLEGTNV+ G +I+K SG+ ++ A++LDD Sbjct: 246 TEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMSPANFLDVGGGASKEKVTAAFKIITADPNVKGILINIFGGIMKCDVIAEGVVAAVKEVGLDVPLVVRLEGTNVEAGKKIIKHSGLNVLPADNLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_RHOPA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodopseudomonas palustris GN=sucC PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.311e-48 Identity = 94/141 (66.67%), Postives = 117/141 (82.98%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+ED +E+ A+K DLNY+ LDG IGCMVNGAGLAMATMDIIKL+G +PANFLDVGG AS+ +V AFKI+T+D V IL+NIFGGIMKCDVIA G+V A K+V L VP+VVRLEGTNV+ G +I+K SG+ ++ A++LDD Sbjct: 246 TEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMSPANFLDVGGGASKEKVTAAFKIITADPNVKGILINIFGGIMKCDVIAEGVVAAVKEVGLDVPLVVRLEGTNVEAGKKIIKHSGLNVLPADNLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_RHILW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=sucC PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.311e-48 Identity = 95/141 (67.38%), Postives = 114/141 (80.85%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+ED +E+ A+K DL Y+ LDG IGCMVNGAGLAMATMDIIKL+G PANF DVGG A + +V AFKI+T+D KV ILVNIFGGIMKCDVIA G++ A K+V LKVP+VVRLEGTNV+ G +IL ESG+ + A+DLDD Sbjct: 246 TEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVGGGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKKILNESGLAITAADDLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_RHIL3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=sucC PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.311e-48 Identity = 95/141 (67.38%), Postives = 114/141 (80.85%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+ED +E+ A+K DL Y+ LDG IGCMVNGAGLAMATMDIIKL+G PANF DVGG A + +V AFKI+T+D KV ILVNIFGGIMKCDVIA G++ A K+V LKVP+VVRLEGTNV+ G +IL ESG+ + A+DLDD Sbjct: 246 TEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVGGGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKKILNESGLAITAADDLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_RHIEC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=sucC PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.311e-48 Identity = 95/141 (67.38%), Postives = 114/141 (80.85%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+ED +E+ A+K DL Y+ LDG IGCMVNGAGLAMATMDIIKL+G PANF DVGG A + +V AFKI+T+D KV ILVNIFGGIMKCDVIA G++ A K+V LKVP+VVRLEGTNV+ G +IL ESG+ + A+DLDD Sbjct: 246 TEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVGGGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKKILNESGLAITAADDLDD 386 The following BLAST results are available for this feature:
BLAST of CF832371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832371 ID=CF832371; Name=CF832371; organism=Citrus sinensis; type=EST; length=694bpback to top |