CF832371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_RHIE6 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhizobium etli (strain CIAT 652) GN=sucC PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.311e-48 Identity = 95/141 (67.38%), Postives = 114/141 (80.85%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+ED +E+ A+K DL Y+ LDG IGCMVNGAGLAMATMDIIKL+G PANF DVGG A + +V AFKI+T+D KV ILVNIFGGIMKCDVIA G++ A K+V LKVP+VVRLEGTNV+ G +IL ESG+ + A+DLDD Sbjct: 246 TEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVGGGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKKILNESGLAITAADDLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_RHOP2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodopseudomonas palustris (strain HaA2) GN=sucC PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.712e-48 Identity = 93/141 (65.96%), Postives = 117/141 (82.98%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 ++ED +E+ A+K DLNY+ LDG IGCMVNGAGLAMATMDIIKL+G TPANFLDVGG AS+ +V AFKI+T+D V IL+NIFGGIMKCD+IA G+V A K+V L VP+VVRLEGTNV+ G +I+K SG+ ++ A++LDD Sbjct: 246 SEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMTPANFLDVGGGASKEKVTAAFKIITADPNVKGILINIFGGIMKCDIIAEGVVAAVKEVGLDVPLVVRLEGTNVEAGKKIIKHSGLNVLPADNLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_TOLAT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=sucC PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.236e-48 Identity = 94/141 (66.67%), Postives = 112/141 (79.43%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQEDPREV AA+ DLNY+ LDG IGCMVNGAGLAM TMDIIK HGG PANFLDVGG A++ +V EAFK++ SD KV A+LVNIFGGI++CD+IA G++ A +V +KVPVVVRLEG N D G + L ESG+ +I A L D Sbjct: 236 TQEDPREVEAARWDLNYVALDGNIGCMVNGAGLAMGTMDIIKHHGGFPANFLDVGGGATKERVTEAFKLILSDSKVKAVLVNIFGGIVRCDLIADGVIGAVAEVGVKVPVVVRLEGNNADLGSKKLAESGLNIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_PSEPF (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas fluorescens (strain Pf0-1) GN=sucC PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.236e-48 Identity = 90/142 (63.38%), Postives = 113/142 (79.58%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+DPRE AAK +LNY+ L+G IGCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +K+PVVVRLEG N + G ++L ESG+ +I A L D Sbjct: 235 PSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLEGNNAELGAKVLAESGLNIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_PSEFS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas fluorescens (strain SBW25) GN=sucC PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.236e-48 Identity = 90/142 (63.38%), Postives = 113/142 (79.58%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+DPRE AAK +LNY+ L+G IGCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +K+PVVVRLEG N + G ++L ESG+ +I A L D Sbjct: 235 PSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLEGNNAELGAKVLAESGLNIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_MARMM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Maricaulis maris (strain MCS10) GN=sucC PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.236e-48 Identity = 94/141 (66.67%), Postives = 115/141 (81.56%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+ED +E+ A+K DL Y+ LDG+IGCMVNGAGLAMATMDIIKL+G PANFLDVGG A+ +V AFKI+T+D V ILVNIFGGIM+CDVIA G+V A K V L+VP+VVRLEGTNV +G +I+ ESG+ +I A+DLDD Sbjct: 246 TEEDEKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATTEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVTAVKDVGLQVPLVVRLEGTNVAKGKQIINESGLNVIAADDLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_COLP3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=sucC PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.236e-48 Identity = 92/142 (64.79%), Postives = 114/142 (80.28%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+QED RE AA+ +LNY+ LDG +GCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD+ V A+LVNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEGTN + G +LK SG+ +I AE L D Sbjct: 235 PSQEDEREAHAAQWELNYVALDGTVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGANKERVSEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGTNAELGREVLKNSGLDIIAAESLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_XANOR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas oryzae pv. oryzae GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 89/141 (63.12%), Postives = 120/141 (85.11%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQED EV A++ D+NY+ +DG IGCMVNGAGLAMATMD+IKL+GG PANFLDVGG A++ +V+EAFK++ S +KV I VNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEGTNV++G ++L++SGM +I A++++D Sbjct: 236 TQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVGGGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLEGTNVEEGKQLLRDSGMAIIPADNIND 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_XANOP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 89/141 (63.12%), Postives = 120/141 (85.11%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQED EV A++ D+NY+ +DG IGCMVNGAGLAMATMD+IKL+GG PANFLDVGG A++ +V+EAFK++ S +KV I VNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEGTNV++G ++L++SGM +I A++++D Sbjct: 236 TQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVGGGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLEGTNVEEGKQLLRDSGMAIIPADNIND 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_XANOM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 89/141 (63.12%), Postives = 120/141 (85.11%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQED EV A++ D+NY+ +DG IGCMVNGAGLAMATMD+IKL+GG PANFLDVGG A++ +V+EAFK++ S +KV I VNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEGTNV++G ++L++SGM +I A++++D Sbjct: 236 TQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVGGGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLEGTNVEEGKQLLRDSGMAIIPADNIND 376 The following BLAST results are available for this feature:
BLAST of CF832371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832371 ID=CF832371; Name=CF832371; organism=Citrus sinensis; type=EST; length=694bpback to top |