CF832371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_XANCP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas campestris pv. campestris GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 89/141 (63.12%), Postives = 120/141 (85.11%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQED EV A++ D+NY+ +DG IGCMVNGAGLAMATMD+IKL+GG PANFLDVGG A++ +V+EAFK++ S +KV I VNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEGTNV++G ++L++SGM +I A++++D Sbjct: 236 TQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVGGGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLEGTNVEEGKQLLRDSGMAIIPADNIND 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_XANCB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas campestris pv. campestris (strain B100) GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 89/141 (63.12%), Postives = 120/141 (85.11%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQED EV A++ D+NY+ +DG IGCMVNGAGLAMATMD+IKL+GG PANFLDVGG A++ +V+EAFK++ S +KV I VNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEGTNV++G ++L++SGM +I A++++D Sbjct: 236 TQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVGGGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLEGTNVEEGKQLLRDSGMAIIPADNIND 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_XANC8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas campestris pv. campestris (strain 8004) GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 89/141 (63.12%), Postives = 120/141 (85.11%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQED EV A++ D+NY+ +DG IGCMVNGAGLAMATMD+IKL+GG PANFLDVGG A++ +V+EAFK++ S +KV I VNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEGTNV++G ++L++SGM +I A++++D Sbjct: 236 TQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVGGGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLEGTNVEEGKQLLRDSGMAIIPADNIND 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_XANC5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 89/141 (63.12%), Postives = 120/141 (85.11%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQED EV A++ D+NY+ +DG IGCMVNGAGLAMATMD+IKL+GG PANFLDVGG A++ +V+EAFK++ S +KV I VNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEGTNV++G ++L++SGM +I A++++D Sbjct: 236 TQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVGGGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLEGTNVEEGKQLLRDSGMAIIPADNIND 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_XANAC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas axonopodis pv. citri GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 89/141 (63.12%), Postives = 120/141 (85.11%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQED EV A++ D+NY+ +DG IGCMVNGAGLAMATMD+IKL+GG PANFLDVGG A++ +V+EAFK++ S +KV I VNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEGTNV++G ++L++SGM +I A++++D Sbjct: 236 TQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVGGGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLEGTNVEEGKQLLRDSGMAIIPADNIND 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_PSEU2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas syringae pv. syringae (strain B728a) GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 90/142 (63.38%), Postives = 113/142 (79.58%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+DPRE AAK +LNY+ L+G IGCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +K+PVVVRLEG N + G ++L ESG+ +I A L D Sbjct: 235 PSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTEAFKIILSDANVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLEGNNAELGAKVLAESGLNIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_PSESM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas syringae pv. tomato GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 90/142 (63.38%), Postives = 113/142 (79.58%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+DPRE AAK +LNY+ L+G IGCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +K+PVVVRLEG N + G ++L ESG+ +I A L D Sbjct: 235 PSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTEAFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLEGNNAELGAKVLAESGLNIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_PSEF5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 90/142 (63.38%), Postives = 113/142 (79.58%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+DPRE AAK +LNY+ L+G IGCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +K+PVVVRLEG N + G ++L ESG+ +I A L D Sbjct: 235 PSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTEAFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLEGNNAELGAKVLAESGLNIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_PSE14 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 90/142 (63.38%), Postives = 113/142 (79.58%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+DPRE AAK +LNY+ L+G IGCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +K+PVVVRLEG N + G ++L ESG+ +I A L D Sbjct: 235 PSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTEAFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLEGNNAELGAKVLAESGLNIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_EXIS2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 96/141 (68.09%), Postives = 113/141 (80.14%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+EDPREV A+K DLNYI LDG IGC+VNGAGLAMATMDIIK G PANFLDVGG A++ +V EAFK++ SDE V I VNIFGGIMKCDVIA GIV A K+V L++P+VVRLEGTNVD G +ILK+SG+ + A + D Sbjct: 236 TEEDPREVEASKNDLNYIALDGNIGCLVNGAGLAMATMDIIKHFSGDPANFLDVGGGATKEKVTEAFKLILSDENVKGIFVNIFGGIMKCDVIAEGIVAATKEVGLELPLVVRLEGTNVDAGKQILKDSGLAITAATSMAD 376 The following BLAST results are available for this feature:
BLAST of CF832371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832371 ID=CF832371; Name=CF832371; organism=Citrus sinensis; type=EST; length=694bpback to top |