CF832371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_ANASK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Anaeromyxobacter sp. (strain K) GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 97/142 (68.31%), Postives = 113/142 (79.58%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P +EDP+E A + DL+YI LDG+IGCMVNGAGLAMATMD+IKL GG PANFLDVGG A E +V AFKI+ SD V A+LVNIFGGIMKCDVIA+GIV AAKQV L +P+VVRLEGTNV+ G IL S + +I A+DL D Sbjct: 235 PDEEDPKETQAKEYDLSYIALDGDIGCMVNGAGLAMATMDVIKLSGGQPANFLDVGGGADEDKVTAAFKIILSDPHVKAVLVNIFGGIMKCDVIANGIVAAAKQVGLSIPLVVRLEGTNVELGKDILAHSELKIIPADDLGD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_ANAD2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 97/142 (68.31%), Postives = 113/142 (79.58%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P +EDP+E A + DL+YI LDG+IGCMVNGAGLAMATMD+IKL GG PANFLDVGG A E +V AFKI+ SD V A+LVNIFGGIMKCDVIA+GIV AAKQV L +P+VVRLEGTNV+ G IL S + +I A+DL D Sbjct: 235 PDEEDPKETQAKEYDLSYIALDGDIGCMVNGAGLAMATMDVIKLSGGQPANFLDVGGGADEDKVTAAFKIILSDPHVKAVLVNIFGGIMKCDVIANGIVAAAKQVGLSIPLVVRLEGTNVELGKDILAHSELKIIPADDLGD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_AERS4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Aeromonas salmonicida (strain A449) GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 92/142 (64.79%), Postives = 114/142 (80.28%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+DPRE AA+ +LNY+ LDG IGCMVNGAGLAM TMDI+ LHGG+PANFLDVGG A++ +V EAFKI+ SD KV A+LVNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEG N + G R L +SG+ +I A L D Sbjct: 235 PSQDDPREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVGGGATKERVTEAFKIILSDSKVQAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGNNAELGARKLADSGLNIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_AERHH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=sucC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48 Identity = 92/142 (64.79%), Postives = 114/142 (80.28%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+DPRE AA+ +LNY+ LDG IGCMVNGAGLAM TMDI+ LHGG+PANFLDVGG A++ +V EAFKI+ SD KV A+LVNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEG N + G R L +SG+ +I A L D Sbjct: 235 PSQDDPREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVGGGATKERVTEAFKIILSDSKVQAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGNNAELGARKLADSGLNIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_SHEAM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sucC PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.814e-48 Identity = 91/142 (64.08%), Postives = 114/142 (80.28%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+D RE AAK +LNY+ LDG +GCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEGTN + G ++L ESG+ +I A+ L D Sbjct: 235 PSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVSEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGTNAELGAKVLAESGLDIIAAKSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_EXISA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=sucC PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.814e-48 Identity = 94/141 (66.67%), Postives = 114/141 (80.85%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+EDPREV A+K DL+YI LDG IGC+VNGAGLAMATMDIIK +G PANFLDVGG A++ +V EAFK++ SD++V I VNIFGGIMKCD+IA GIV A K++ L +P+VVRLEGTNVD G RIL ESG+ + TA + D Sbjct: 236 TEEDPREVEASKHDLSYIALDGNIGCLVNGAGLAMATMDIIKHYGAEPANFLDVGGGATKEKVTEAFKLILSDDQVKGIFVNIFGGIMKCDIIAEGIVAATKEIGLDLPLVVRLEGTNVDAGKRILDESGLAITTANSMAD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_AGRVS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=sucC PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.814e-48 Identity = 94/141 (66.67%), Postives = 115/141 (81.56%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+ED +E+ A+K DL Y+ LDG IGCMVNGAGLAMATMDIIKL+G PANFLDVGG A++ +V AFKI+T+D V ILVNIFGGIMKCDVIA G++ A K V L VP+VVRLEGTNV+ G +I+ ESG+ +I+A+DLDD Sbjct: 246 TEEDAKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTAAFKIITADPAVKGILVNIFGGIMKCDVIAEGVLAAVKDVGLTVPLVVRLEGTNVELGKKIINESGLNVISADDLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_TERTT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=sucC PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.981e-48 Identity = 89/142 (62.68%), Postives = 114/142 (80.28%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+QED RE AAK +LNY+ LDG IGCMVNGAGLAM TMDI+KLHGG PANFLDVGG A++ +VVEAFKI+ SDE V A+L+NIFGGI++CD+IA G++ A ++V +K+PVV RLEG N + G ++L +SG+ +I A L D Sbjct: 235 PSQEDEREAHAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVGGGATKERVVEAFKIILSDESVSAVLINIFGGIVRCDLIAEGVIGAVEEVGVKIPVVCRLEGNNAELGAKVLADSGLNIIAATSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_PROMH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Proteus mirabilis (strain HI4320) GN=sucC PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.981e-48 Identity = 91/142 (64.08%), Postives = 114/142 (80.28%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+QEDPRE AA+ +LNY+ LDG IGCMVNGAGLAM TMDI+KLHGG PANFLDVGG A++ +V EAFKI+ SDE V A+LVNIFGGI++CD+IA GI+ A ++V + VPVVVRLEG N + G + L +SG+ +I A+ L D Sbjct: 235 PSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDENVSAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLEGNNAELGTKKLADSGLNIIAAKSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_ANADE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=sucC PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.981e-48 Identity = 96/142 (67.61%), Postives = 113/142 (79.58%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P +EDP+E A + DL+YI LDG+IGCMVNGAGLAMATMD+IKL GG PANFLDVGG A E +V AFKI+ SD V A+LVNIFGGIMKCDVIA+GIV AAKQV L +P+VVRLEGTNV+ G IL S + +I A+DL + Sbjct: 235 PDEEDPKETQAKEYDLSYIALDGDIGCMVNGAGLAMATMDVIKLSGGQPANFLDVGGGADEDKVTAAFKIILSDPHVKAVLVNIFGGIMKCDVIANGIVAAAKQVGLSIPLVVRLEGTNVELGKEILAHSELKIIPADDLGE 376 The following BLAST results are available for this feature:
BLAST of CF832371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832371 ID=CF832371; Name=CF832371; organism=Citrus sinensis; type=EST; length=694bpback to top |