CF832393

Overview
NameCF832393
Unique NameCF832393
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6949 contig Csv1_Contig6949:55..757. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832393 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.607e-36
Identity = 75/148 (50.68%), Postives = 102/148 (68.92%), Query Frame = 3
Query:  261 FKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTXQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADA 701
            F VESP+V Y    I + Y+Y TT +  E   G  +  V P + ++ F+T   VP+LGVMLVGWGGNNGSTLT  V+ANR  +SW T+   ++ANY+GSLTQA  + +G    G+E++ PF ++LPMV P+D+VF GWDIS +NLA+A
Sbjct:    7 FFVESPDVVYGPEAIEAQYEYRTTRVSREG--GVLK--VHPTSTRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLSWPTRSGRKEANYYGSLTQAGTVSLGLDAEGQEVFVPFSAVLPMVAPNDLVFDGWDISSLNLAEA 150          
BLAST of CF832393 vs. ExPASy Swiss-Prot
Match: INO1_MACFA (Inositol-3-phosphate synthase 1 OS=Macaca fascicularis GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.405e-36
Identity = 75/148 (50.68%), Postives = 102/148 (68.92%), Query Frame = 3
Query:  261 FKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTXQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADA 701
            F VESP+V Y    I + Y+Y TT +  E   G  +  V P + ++ F+T   VP+LGVMLVGWGGNNGSTLT  V+ANR  +SW T+   ++ANY+GSLTQA  + +G    G+E++ PF ++LPMV P+D+VF GWDIS +NLA+A
Sbjct:    7 FFVESPDVVYGPEAIEAQYEYRTTRVSREG--GVLK--VHPTSTRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLSWPTRSGRKEANYYGSLTQAGTVSLGLDAEGQEVFVPFSALLPMVAPNDLVFDGWDISSLNLAEA 150          
BLAST of CF832393 vs. ExPASy Swiss-Prot
Match: INO1_RAT (Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34
Identity = 71/146 (48.63%), Postives = 101/146 (69.18%), Query Frame = 3
Query:  267 VESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTXQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADA 701
            V+SP+V +    I + Y+Y TT +  E   G  +  V+P   ++ F+T   VP+LGVMLVGWGGNNGSTLT  V+ANR  ++W T+   ++ANY+GSLTQA  + +G   +G E++ PF ++LPMV P+D+VF GWDIS +NLA+A
Sbjct:    9 VDSPDVIFGPEAIEARYEYRTTRVSREG--GVLR--VRPTATRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLTWPTRTGRKEANYYGSLTQAGTVNLGLDGDGREVFVPFSALLPMVAPNDLVFDGWDISSLNLAEA 150          
BLAST of CF832393 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.437e-34
Identity = 72/147 (48.98%), Postives = 97/147 (65.99%), Query Frame = 3
Query:  264 KVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTXQQANYFGSLTQASAIRVGS-YNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADA 701
            +V SP V+  D  I + YDY+T+   H  R    Q  V P+T   + +T  HVPKLGVMLVGWGGNNGSTLT  + ANR  + W  +   Q+AN++GS+TQAS + +GS  +G ++Y P K +LPMV PD+I+  GWDIS ++L DA
Sbjct:   10 EVISPKVQVDDEFITTDYDYQTS---HVKRTADGQLQVHPQTTSLKIRTGRHVPKLGVMLVGWGGNNGSTLTAALEANRRQLKWRKRTGVQEANWYGSITQASTVFIGSDEDGGDVYVPMKELLPMVEPDNIIVDGWDISGLHLGDA 153          
BLAST of CF832393 vs. ExPASy Swiss-Prot
Match: INO1_CANAL (Inositol-3-phosphate synthase OS=Candida albicans GN=INO1 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.637e-30
Identity = 66/146 (45.21%), Postives = 98/146 (67.12%), Query Frame = 3
Query:  270 ESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTXQQANYFGSLTQASAIRVG--SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADA 701
            +S N    D+ +++ + YE + +V ++ NG +  IV P    YEFK D+ VPK+G++LVG GGNNG+TL G  +AN+  IS+  K+   + NY+GS+TQAS +++G     GE++Y PF SI+PMVNP+D+V  GWDIS + L  A
Sbjct:    8 KSSNSVTKDDHLYTKFTYENS-VVEKDANGKF--IVTPTASDYEFKVDLKVPKVGLLLVGIGGNNGTTLLGATLANKHNISFENKEGVVKPNYYGSVTQASTVKIGVDKETGEDVYVPFNSIVPMVNPNDLVVDGWDISGLPLDQA 150          
BLAST of CF832393 vs. ExPASy Swiss-Prot
Match: INO1_YEAST (Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae GN=INO1 PE=1 SV=3)

HSP 1 Score: 129.798 bits (325), Expect = 1.386e-29
Identity = 67/152 (44.08%), Postives = 97/152 (63.82%), Query Frame = 3
Query:  252 IENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVP-KLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTXQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADA 701
            I + KV +    Y DNE+ + Y YE   +V +  +G +   V P    Y FK D+  P KLG+ML+G GGNNGSTL   V+AN+  + + TK+  +Q NYFGS+TQ S +++G    G ++YAPF S+LPMV+P+D V  GWDI++ +L +A
Sbjct:    9 ITSVKVVTDKCTYKDNELLTKYSYENA-VVTKTASGRFD--VTPTVQDYVFKLDLKKPEKLGIMLIGLGGNNGSTLVASVLANKHNVEFQTKEGVKQPNYFGSMTQCSTLKLGIDAEGNDVYAPFNSLLPMVSPNDFVVSGWDINNADLYEA 157          
BLAST of CF832393 vs. ExPASy Swiss-Prot
Match: INO1_CANGA (Inositol-3-phosphate synthase OS=Candida glabrata GN=INO1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.694e-27
Identity = 65/144 (45.14%), Postives = 94/144 (65.28%), Query Frame = 3
Query:  282 VKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVP-KLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTX--QQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADA 701
            V Y +NE+ + Y Y T  +VH N + T Q+ V P    Y+FK D++ P +LGVMLVG GGNNGST+   V+AN+  + + T+D     + NY+GSLTQ+S I++G    G+++Y PF S++PMVNP+D V  GWDI+   +  A
Sbjct:   18 VSYKENELLTNYTYHTN-VVHTNSDKT-QFEVTPLDKNYQFKVDLNKPERLGVMLVGLGGNNGSTMMAAVLANKHNVCFRTRDKEGLTEPNYYGSLTQSSTIKLGVDSKGKDVYVPFNSLVPMVNPNDFVVSGWDINGATMDQA 159          
The following BLAST results are available for this feature:
BLAST of CF832393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_HUMAN2.607e-3650.68Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]
INO1_MACFA3.405e-3650.68Inositol-3-phosphate synthase 1 OS=Macaca fascicul... [more]
INO1_RAT1.869e-3448.63Inositol-3-phosphate synthase 1 OS=Rattus norvegic... [more]
INO1_DROME5.437e-3448.98Inositol-3-phosphate synthase OS=Drosophila melano... [more]
INO1_CANAL1.637e-3045.21Inositol-3-phosphate synthase OS=Candida albicans ... [more]
INO1_YEAST1.386e-2944.08Inositol-3-phosphate synthase OS=Saccharomyces cer... [more]
INO1_CANGA1.694e-2745.14Inositol-3-phosphate synthase OS=Candida glabrata ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832393 ID=CF832393; Name=CF832393; organism=Citrus sinensis; type=EST; length=702bp
TCGAAAGTTAAACGATTGTTGAGTCGAGTGGGAAGTGAGAATTGAGAAGG
AGAGTCGAGTTCGGAGACAGCAAGACGAAACAGCTCTTCTTCCAATAAAT
CTCAAAGCATTTGTTTGGTTTTATTTAAAGCAATTTTCTCAGCAAACTCT
TCTTCTAATAAATTTTAAAGCATTTGTTTGGTTTTTATTTAAAGCAATTT
TCTCAGCGAAGTTTTCAATTTTTTCTCTAAAATTTTCCTGGGAAAATGTT
TATCGAAAATTTCAAGGTTGAGAGCCCAAATGTGAAGTACACAGATAATG
AGATTCACTCTGTGTACGATTATGAAACCACTGAGCTTGTTCATGAGAAC
AGAAATGGCACTTATCAGTGGATTGTCAAGCCCAAAACTGTCAAATATGA
GTTCAAAACCGATGTTCATGTCCCTAAACTTGGGGTTATGCTTGTGGGTT
GGGGTGGAAACAACGGCTCAACTCTCACGGGTGGTGTTATCGCGAATCGA
GAGGGAATCTCCTGGGCCACAAAGGACACAGNGCAACAAGCCAATTATTT
TGGTTCACTTACCCAAGCATCAGCAATTAGAGTTGGGTCTTACAATGGAG
AGGAGATTTATGCTCCATTCAAGAGCATTCTCCCTATGGTGAACCCAGAT
GACATTGTGTTTGGAGGATGGGACATTAGTGACATGAACTTGGCTGATGC
CA
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