CF832401

Overview
NameCF832401
Unique NameCF832401
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1013 contig Csv1_Contig1013:351..1134. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_DICDI (Dihydrolipoyl dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=lpd PE=3 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.218e-73
Identity = 128/212 (60.38%), Postives = 163/212 (76.89%), Query Frame = -3
Query:  136 AGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 771
            AGG    LEAD VLVS GR P T+GLGL+ +G+ TDK GR+ V + F T +P ++AIGD I GPMLAHKAEE+G+A +E +    GHV+Y  +P ++YTHPEVA VGKTEE++++ G++Y +G+FPF+ANSRAK  DD EG VK LA K++D++LG HIM  NAGELI E VLA+ Y AS EDIAR CH HPT+SEA+KEAAM  +DKPIH+
Sbjct:  277 AGGFTGTLEADAVLVSVGRRPNTSGLGLESVGIPTDKAGRVEVGDHFNTKVPSIFAIGDAIRGPMLAHKAEEEGIAIIEQIHNGGGHVNYGAIPSIIYTHPEVAWVGKTEEELQKEGIQYNIGRFPFVANSRAKTNDDVEGFVKFLAAKDSDRVLGAHIMGTNAGELIGECVLAMEYGASCEDIARTCHGHPTLSEAVKEAAMDAYDKPIHM 488          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_CANFA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Canis familiaris GN=DLD PE=1 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 4.203e-73
Identity = 128/208 (61.54%), Postives = 164/208 (78.85%), Query Frame = -3
Query:  160 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMA 783
            +E A+GG+  ++  DV+LV  GR PFT  LGL+++G+E D  GRIPVN RF T IP +YAIGDV+ GPMLAHKAE++G+ CVE +AG    +DY+ VP V+YTHPEVA VGK+EEQ+KE G+EY+VGKFPF ANSRAK   D +G+VKIL +K TD++LG HI+ P AGE+++EA LA+ Y AS EDIARVCHAHPT+SEA +EA +A
Sbjct:  293 IEGASGGKAEVITCDVLLVCIGRRPFTQNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVPIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLA 500          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_YEAST (Dihydrolipoyl dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=LPD1 PE=1 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.766e-71
Identity = 125/204 (61.27%), Postives = 162/204 (79.41%), Query Frame = -3
Query:  139 LEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 750
            LEA+V+LV+ GR P+ AGLG +KIG+E DK GR+ ++++F +  P +  +GDV  GPMLAHKAEE+G+A VE L   HGHV+Y+ +P V+Y+HPEVA VGKTEEQ+KE G++Y++GKFPF ANSRAK   D EG VKIL + +T++ILG HI+ PNAGE+I EA LA+ Y AS+ED+ARVCHAHPT+SEA KEA MA +DK IH
Sbjct:  295 LEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHPEVAWVGKTEEQLKEAGIDYKIGKFPFAANSRAKTNQDTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAFKEANMAAYDKAIH 498          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_TRYBB (Dihydrolipoyl dehydrogenase OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.144e-70
Identity = 131/212 (61.79%), Postives = 162/212 (76.42%), Query Frame = -3
Query:  139 AGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP-GPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 771
            AGG+   L  D +LVS GR P+TAGLGL+K  V  ++ G + +   F TN+ GVYAIGDV+  GPMLAHKAE++GVAC E LAG+ GHV+YD +PGV+YT PEVASVGKTEE++K+ GV Y+VGKFPF ANSRAKA+   +G VK+L +K TD+ILGVHI+   AGELI  A+LA+ Y ASSED+ R CHAHPTMSEA+KEA MA   K I+
Sbjct:  267 AGGQAETLHCDALLVSVGRRPYTAGLGLEKNNVSLNERGFVKIGSHFETNVAGVYAIGDVVDKGPMLAHKAEDEGVACAEILAGRPGHVNYDVIPGVIYTMPEVASVGKTEEELKKAGVAYKVGKFPFNANSRAKAVATEDGFVKVLTDKATDRILGVHIVCSAAGELIAGALLAMEYGASSEDVGRTCHAHPTMSEAVKEACMACFAKTIN 478          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_TRYCR (Dihydrolipoyl dehydrogenase OS=Trypanosoma cruzi GN=LPD PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.808e-69
Identity = 129/210 (61.43%), Postives = 160/210 (76.19%), Query Frame = -3
Query:  139 GEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP-GPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 765
            G++  +  + +LVS GR PFT GLGLDKI V  ++ G + + + F T+IP VYAIGDV+  GPMLAHKAE++GVAC E LAGK GHV+Y  +P V+YT PEVASVGK+EE++K+ GV Y+VGKFPF ANSRAKA+   +G VK+L +K TD+ILGVHI+   AGELI EA LA+ Y ASSED+ R CHAHPTMSEALKEA MA   K I+
Sbjct:  267 GKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAGKPGHVNYGVIPAVIYTMPEVASVGKSEEELKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHPTMSEALKEACMALVAKTIN 476          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_MANSE (Dihydrolipoyl dehydrogenase OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.280e-69
Identity = 125/216 (57.87%), Postives = 161/216 (74.54%), Query Frame = -3
Query:  139 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATH-DKPIH 783
            +E A GG K  ++ DVVL+S GR P+T  LGLDK+G+  D  GR+PVN +F T +PG+YAIGDVI GPMLAHKAE++G+ CVE + G   H +YD +P V+YT PEV  V KTEE +K+ G  Y+V KFPFLANSRAK   + +G VK+L++K TD ILG HI+ P  GELI+EAVLA  Y A++ED+ARVCHAHPT +EAL+EA +A +  KPI+
Sbjct:  281 IEGAKGGNKETMDCDVVLISIGRRPYTKDLGLDKVGIALDDRGRVPVNNKFQTTVPGIYAIGDVIHGPMLAHKAEDEGIVCVEGIKGMPVHFNYDAIPSVIYTSPEVGWVRKTEEDLKKEGKAYKVRKFPFLANSRAKTNGEPDGFVKVLSDKATDVILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEALREANLAAYCGKPIN 496          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_RHOCA (Dihydrolipoyl dehydrogenase OS=Rhodobacter capsulatus GN=lpd PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 4.071e-68
Identity = 120/204 (58.82%), Postives = 160/204 (78.43%), Query Frame = -3
Query:  139 LEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 750
            +EA+VVLV+ GR PFT GLGL+ +GVE    G++  +  +ATN+PG+YAIGD I GPMLAHKAE++G+A  E +AGKHGHV+YD +PGV+YT PEVA+VGKTE+ +K+ G  Y+VGKF F+ N RAKA+  AEG VKILA+  TD+ILG HI+ P+AG++IHE  +A+ + AS++D+A  CHAHPT SEA++EAA+A  D  IH
Sbjct:  250 IEAEVVLVATGRKPFTKGLGLEALGVEMLPRGQVKADSHWATNVPGLYAIGDAIVGPMLAHKAEDEGMAVAEVIAGKHGHVNYDVIPGVIYTTPEVAAVGKTEDALKQEGRAYKVGKFSFMGNGRAKAVFQAEGFVKILADAATDRILGAHIIGPSAGDMIHEICVAMEFGASAQDLALTCHAHPTYSEAVREAALACGDGAIH 453          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_SCHPO (Dihydrolipoyl dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=dld1 PE=2 SV=2)

HSP 1 Score: 250.366 bits (638), Expect = 8.488e-66
Identity = 119/216 (55.09%), Postives = 160/216 (74.07%), Query Frame = -3
Query:  139 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATH-DKPIH 783
            +E     ++   + DV+LV+ GR P+T GLGLDK+G+  DK  R+ ++  + TNIP +  IGD   GPMLAHKAE++G+A VE++A   GHV+Y+ +P V+YTHPEVA VG TE++ KE G++YR+G FPF ANSRAK   DA+G+VK++ + ETD++LGVH++ P AGELI EA LA+ Y AS+ED+ARVCHAHPT+SEA KEA MA    K IH
Sbjct:  295 IENMKNNKRETYQTDVLLVAIGRVPYTEGLGLDKLGISMDKSNRVIMDSEYRTNIPHIRVIGDATLGPMLAHKAEDEGIAAVEYIAKGQGHVNYNCIPAVMYTHPEVAWVGITEQKAKESGIKYRIGTFPFSANSRAKTNMDADGLVKVIVDAETDRLLGVHMIGPMAGELIGEATLALEYGASAEDVARVCHAHPTLSEATKEAMMAAWCGKSIH 510          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH3_PSEPU (Dihydrolipoyl dehydrogenase 3 OS=Pseudomonas putida GN=lpd3 PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 5.149e-63
Identity = 116/207 (56.04%), Postives = 154/207 (74.40%), Query Frame = -3
Query:  163 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAM 783
            LEPAAGG    L+AD VLV+ GR P+T GL L+ +G+ETDK G +       T++PGV+ IGDV  GPMLAHKAE++ VAC+E +AGK   V+Y+ +PGV+YT PE+A+VGKTEEQ+K  G  Y+VGKFPF ANSRAK   + EG  K++A+ ETD++LGVH++ P+  E+I E  +A+ + AS+EDIA  CH HPT SEAL++AAM
Sbjct:  252 LEPAAGGTAESLQADYVLVAIGRRPYTKGLNLESVGLETDKRGML-AQRTPPTSVPGVWVIGDVTSGPMLAHKAEDEAVACIERIAGKPHEVNYNLIPGVIYTRPELATVGKTEEQLKAEGRAYKVGKFPFTANSRAKINHETEGFAKVIADAETDEVLGVHLVGPSVSEMIGEFCVAMEFSASAEDIALTCHPHPTRSEALRQAAM 457          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_RALEH (Dihydrolipoyl dehydrogenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=odhL PE=3 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 2.826e-61
Identity = 113/210 (53.81%), Postives = 157/210 (74.76%), Query Frame = -3
Query:  136 GEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 765
            G+   LE D ++VS GR P T  LGLD +G+  D+ G I V++  AT +PG++AIGDV+ GPMLAHKAE++GVA  E +AG+  H+DY+ VP V+YT PE+A VGKTE Q+K  G EY+ G+FPF+AN RA  +  A+G VK+LA+ +TD+ILGVHI+A NA +LI EAV+A+ + A+SEDI RVCH HP+MSE ++EAA+A   + +++
Sbjct:  265 GKAQTLEVDRLIVSVGRVPNTDNLGLDAVGLAADQRGFIEVDDHCATKVPGLWAIGDVVRGPMLAHKAEDEGVAVAERIAGQKPHIDYNCVPWVIYTFPEIAWVGKTEAQLKAEGREYKAGQFPFMANGRALGMGHADGFVKMLADAKTDEILGVHIVAANASDLIAEAVVAMEFKAASEDIGRVCHPHPSMSEVMREAALAVDKRQLNM 474          
The following BLAST results are available for this feature:
BLAST of CF832401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 226
Match NameE-valueIdentityDescription
DLDH_DICDI3.218e-7360.38Dihydrolipoyl dehydrogenase, mitochondrial OS=Dict... [more]
DLDH_CANFA4.203e-7361.54Dihydrolipoyl dehydrogenase, mitochondrial OS=Cani... [more]
DLDH_YEAST1.766e-7161.27Dihydrolipoyl dehydrogenase, mitochondrial OS=Sacc... [more]
DLDH_TRYBB1.144e-7061.79Dihydrolipoyl dehydrogenase OS=Trypanosoma brucei ... [more]
DLDH_TRYCR4.808e-6961.43Dihydrolipoyl dehydrogenase OS=Trypanosoma cruzi G... [more]
DLDH_MANSE6.280e-6957.87Dihydrolipoyl dehydrogenase OS=Manduca sexta PE=2 ... [more]
DLDH_RHOCA4.071e-6858.82Dihydrolipoyl dehydrogenase OS=Rhodobacter capsula... [more]
DLDH_SCHPO8.488e-6655.09Dihydrolipoyl dehydrogenase, mitochondrial OS=Schi... [more]
DLDH3_PSEPU5.149e-6356.04Dihydrolipoyl dehydrogenase 3 OS=Pseudomonas putid... [more]
DLDH_RALEH2.826e-6153.81Dihydrolipoyl dehydrogenase OS=Ralstonia eutropha ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832401 ID=CF832401; Name=CF832401; organism=Citrus sinensis; type=EST; length=785bp
TTTTTTTTGAGCAATACAAATTTCTATTAAAGCATCTGCTTCAAAGCTGG
ACAATTGAGAAAACAGAAGAACGTCTTTTTCAAGATATCTGAAAAATCTC
AAACAAAAAATAACAAAGTAATAACCCGCTTCTCAGATGTGAATGGGTTT
GTCGTGAGTGGCCATAGCAGCCTCCTTCAATGCCTCACTCATTGTAGGAT
GTGCATGGCACACACGTGCAATGTCCTCACTTGATGCATCATAATTAATG
GCCAGGACAGCCTCGTGGATGAGCTCTCCAGCATTGGGTGCCATAATATG
AACCCCCAATATCTTGTCTGTCTCTTTCTCAGCCAAAATCTTGACTATTC
CTTCAGCATCATCAATAGCTTTTGCTCGGCTATTTGCCAAGAAAGGGAAT
TTCCCCACACGGTACTCAACACCAAGTTCCTTTACCTGCTCCTCAGTCTT
CCCAACTGAAGCAACCTCAGGGTGTGTGTAGACAACTCCAGGGACCTTAT
CATAGTCCACATGGCCATGTTTACCAGCTAAGAATTCAACACAAGCAACC
CCATCCTCTTCTGCCTTGTGAGCTAACATTGGTCCTGGAATTACGTCTCC
AATCGCATAAACACCAGGTATGTTTGTAGCAAATCTCTCATTAACTGGTA
TCCGTCCCATCTTATCGGTTTCCACTCCTATCTTATCCAGCCCGAGCCCA
GCGGTGAATGGAGTCCGGCCAGCAGACACAAGAACAACATCAGCTTCAAG
TATGGTCTTTTCACCACCAGCTGCTGGTTCAAGGG
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