CF832404

Overview
NameCF832404
Unique NameCF832404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP17A_PANTR (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Pan troglodytes GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.638e-19
Identity = 51/183 (27.87%), Postives = 94/183 (51.37%), Query Frame = -1
Query:  190 ITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPP 738
            ++++++L  + +I  A +ETT   ++W +A ++++P+++KKL  E+D  +G     T  D ++L  L+A I+E +RLR   P+L+PH    D+ +G + V   +++I+N W + +N  +W +             +  +       YLPFG G RSC                L+Q F+L  P
Sbjct:  287 LSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTQVIINLWALHHNEKEWHQ-PDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVP 468          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP17A_HUMAN (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Homo sapiens GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.638e-19
Identity = 51/183 (27.87%), Postives = 94/183 (51.37%), Query Frame = -1
Query:  190 ITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPP 738
            ++++++L  + +I  A +ETT   ++W +A ++++P+++KKL  E+D  +G     T  D ++L  L+A I+E +RLR   P+L+PH    D+ +G + V   +++I+N W + +N  +W +             +  +       YLPFG G RSC                L+Q F+L  P
Sbjct:  287 LSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQ-PDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVP 468          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP17A_MESAU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocricetus auratus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.128e-18
Identity = 57/220 (25.91%), Postives = 101/220 (45.91%), Query Frame = -1
Query:  190 CSKSMSN*SLKCAIDHILDAQTKGE------------ITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPP 813
            C +  ++ S+   +D ++ A+T  +             ++ ++L  + +I  A IETT   + W IA ++++PE++KK+  E+D  IG     T  D + L  L+A I+E +R+R   P+L+PH    D  +G + +P  + +I+N W + ++  +W +                        YLPFG G RSC                L+Q F+L  P
Sbjct:  250 CKEKFNSDSISSLMDLLIQAKTNADNNNTSEGQGSNAFSDMHILATIADIFGAGIETTASVLSWIIAFLLHNPEVKKKIQKEIDQNIGFSRTPTFNDRNHLLMLEATIREVLRIRPVAPMLIPHRANSDMSIGEFSIPKFTPVIINLWALHHSEKEWDQPDRFMPERFLDPTGS-HLITPSLSYLPFGAGARSCIGEVLARQELFLFMAHLLQRFDLDVP 468          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP1A2_CAVPO (Cytochrome P450 1A2 OS=Cavia porcellus GN=CYP1A2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.473e-18
Identity = 47/157 (29.94%), Postives = 77/157 (49.04%), Query Frame = -1
Query:  268 ITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 738
            I    ++ +V +I  A  +T   +I W +  +V  PEIQKK+  ELD+VIGR  +    D  +LPY++A I E  R    +P  +PH   +D  L G+ +P +  + +N W + ++P QW+              +         + L FG+G+R C
Sbjct:  302 IPRKKIVNLVNDIFGAGFDTVTTAISWSLLYLVTKPEIQKKIHKELDAVIGRDRKPRLADRPQLPYMEAFILEVFRYSSFLPFTIPHCTTRDTILNGFYIPKDRCVFINQWQVNHDPKQWEDPFEFRPERFLLANNTAVDKTLSDKILLFGLGKRRC 458          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP1A1_RABIT (Cytochrome P450 1A1 OS=Oryctolagus cuniculus GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.473e-18
Identity = 50/165 (30.30%), Postives = 82/165 (49.70%), Query Frame = -1
Query:  268 LDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 762
            LD     +++++  + IV ++  A  +T   +I W +  +V  P IQ+K+  ELD+V+GR  +    D  +LPYL+AVI ET R    +P  +PH   +D  LGG+ +P    + VN W   ++P  W                 V+    + + L FG+G+R C
Sbjct:  298 LDENANVQVSDEKTVGIVLDLFGAGFDTVTTAISWSLMYLVTKPRIQRKIQEELDAVVGRARRPRFSDRPQLPYLEAVIMETFRHTSFLPFTIPHSTTRDTSLGGFYIPKGRCVFVNQWQNNHDPELWGDPEAFRPERFLTPSGAVDKALTE-KVLLFGLGKRKC 461          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.473e-18
Identity = 61/193 (31.61%), Postives = 88/193 (45.60%), Query Frame = -1
Query:  187 LDAQTKGEITEDNVLY-IVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPS 762
            LD +T   I  D ++   V  I  A  E ++ +I W +  I+ +P I +    ELD  +G+   I E D   L YLQAV+KET+RL    P+  P    +D  LGGY V   +++I N W I  +P  W                 ++  G+ F+ LPFG GRR C                 + +FE+L PS
Sbjct:  298 LDGKTIDGIDADTLIKSTVLTIIQAGTEASISTIIWAMCLILKNPLILENKA-ELDIQVGKDRCICESDISNLVYLQAVVKETLRLYAPGPLSSPREFAEDCTLGGYHVKKGTRLITNIWKIHTDPNVWSDPFEFKPDRFLTTHKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSFEILNPS 489          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.924e-18
Identity = 56/206 (27.18%), Postives = 103/206 (50.00%), Query Frame = -1
Query:  172 IDHILDAQTKGEI----TEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVI-GRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPSWSM*D 774
            ++ +L  + +GE+    +  +V  I+ ++     ETT  + EW ++E++ +PE+  K+  E+  V   +  Q  E     L Y++ VIKET+RL   +P+L+PH+  +  ++GGY++   +++++N+W +A +P  W              +   +  G+ F YLPFG GRR C               RL+  F+     WS+ D
Sbjct:  267 VNVLLRIKDQGELDFPFSSTHVKAIILDMFTGGTETTSSTTEWLMSELMRNPEVMAKVQAEVRGVFDNKSPQDHEGLLENLSYMKLVIKETLRLNPVLPLLLPHLCRETCEIGGYEIVEGTRVLINSWAMARSPEYW--DDAEKFIPERFEDGTADFKGSRFEYLPFGTGRRRCPGDIFAMATLELIVARLLYYFD-----WSLPD 465          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.924e-18
Identity = 60/199 (30.15%), Postives = 94/199 (47.24%), Query Frame = -1
Query:  190 IDHILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILV-PHMNLQDAKL-GGYDVPAESKIIVNAWWIANNPAQW--KKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPP 774
            +D +L  +   ++ +D+++ I+  +     +TT    EW +AE+V HP +Q ++  E+D+ +G G   T+ D  ++PYLQAV+KET+R     P+L    +   D  L  G  VPA +  +VN W I ++ A W                 + V+  G D R  PFG GRR C               RLV  F+   P
Sbjct:  318 VDVLLSLEGDEKLGDDDMVAILWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVARMPYLQAVVKETLRAHPPGPLLSWARLATADVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALP 516          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP21A_BOVIN (Steroid 21-hydroxylase OS=Bos taurus GN=CYP21 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.513e-18
Identity = 56/188 (29.79%), Postives = 88/188 (46.81%), Query Frame = -1
Query:  190 GEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRG---HQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPP 744
            G++ E +V   V ++ +   ETT  ++ W +A +++HPEIQ++L  ELD  +G G    ++T  D  +LP L A I E +RLR  +P+ +PH   + + + GYD+P    +I N      +   W++             +   A       L FG G R C               RL+Q F LLPP
Sbjct:  273 GQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPGANPSA-------LAFGCGARVCLGESLARLELFVVLLRLLQAFTLLPP 453          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP1A1_PLEPL (Cytochrome P450 1A1 OS=Pleuronectes platessa GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.513e-18
Identity = 47/193 (24.35%), Postives = 88/193 (45.60%), Query Frame = -1
Query:  193 DHILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLP 771
            D  LD  +  +++++ ++ IV ++  A  +T   ++ W +  +V HPEIQ++L  E++  +G        D   LP+L+A I E +R    +P  +PH   +D  L GY +P ++ + +N W I ++P  WK             +       +  + + FG+G+R C                ++Q    LP
Sbjct:  296 DRKLDENSNVQMSDEKIVGIVNDLFGAGFDTVSTALSWSVMYLVAHPEIQERLYQEIEDKVGLDRMPLLSDKPNLPFLEAFILEILRHSSFLPFTIPHCTTKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLSADGSEVNKLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAIIIQKLHFLP 488          
The following BLAST results are available for this feature:
BLAST of CF832404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 313
Match NameE-valueIdentityDescription
CP17A_PANTR8.638e-1927.87Steroid 17-alpha-hydroxylase/17,20 lyase OS=Pan tr... [more]
CP17A_HUMAN8.638e-1927.87Steroid 17-alpha-hydroxylase/17,20 lyase OS=Homo s... [more]
CP17A_MESAU1.128e-1825.91Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocr... [more]
CP1A2_CAVPO1.473e-1829.94Cytochrome P450 1A2 OS=Cavia porcellus GN=CYP1A2 P... [more]
CP1A1_RABIT1.473e-1830.30Cytochrome P450 1A1 OS=Oryctolagus cuniculus GN=CY... [more]
C82A4_SOYBN1.473e-1831.61Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C99A3_ORYSJ1.924e-1827.18Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C78A1_MAIZE1.924e-1830.15Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
CP21A_BOVIN2.513e-1829.79Steroid 21-hydroxylase OS=Bos taurus GN=CYP21 PE=1... [more]
CP1A1_PLEPL2.513e-1824.35Cytochrome P450 1A1 OS=Pleuronectes platessa GN=cy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832404 ID=CF832404; Name=CF832404; organism=Citrus sinensis; type=EST; length=831bp
CCACTGCCACTTGATTTGATCCGACATTGAAGAAACCATTCAACCACTTT
GAAACAGACTTAACATTACAACCAAATGGAATTGTGAAACTAGAATGATC
TAGGCTTGGCAACAATGGTCGAGTGCTTCAAAATGTGCAAACTGAACTGC
CCACCTTTCTCTGCAATGTCAATCTTACATTGACCATGAAGGAGGCAAGA
GCTCAAAGTTCTGTACCAAACGCCCAATAATGATACCAAGAATTGGCAAA
GCAAGGATAATTCCAGGGCAGCTTCTTCTCCCAACACCGAAAGGAAGGTA
ACGGAAATCATTTCCATTAGCCTCAACCTTGGACTCCTCCTCCAAAAACC
TCTCAGGCCTGAATTCTTCAGGTTTCTTCCATTGGGCGGGATTGTTGGCG
ATCCACCACGCGTTCACTATGATTTTGCTCTCAGCAGGGACGTCATATCC
TCCAAGCTTGGCGTCCTGAAGGTTCATGTGCGGCACAAGAATAGGAATTG
CCATCCTAAGGCGAATAGTTTCCTTGATCACGGCCTGAAGGTAGGGTAGT
TTGTGGGTGTCAAGCTCAGTGATTTGATGACCACGACCAATCACGGAGTC
AAGTTCATTGCAGAGCTTCTTCTGGATTTCAGGATGATTCACTATCTCTG
CAATTCCCCACTCTATCGACCAAAGAGTTGTCTCTATCGCGGCAACATTG
ATGTTCTCAACGATGTATAGAACGTTGTCCTCGGTGATTTCTCCCTTTGT
CTGAGCGTCCAAAATATGATCGATTGCGCATTTCAAGCTTTAATTACTCA
TGCTCTTCGAGCATGCGCATGTCTTTCTCTC
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