CF832404

Overview
NameCF832404
Unique NameCF832404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP1A1_ORYLA (Cytochrome P450 1A1 OS=Oryzias latipes GN=cyp1a1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.436e-15
Identity = 43/168 (25.60%), Postives = 78/168 (46.43%), Query Frame = -1
Query:  268 DHILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 771
            D  LD  +  +++++ V+ IV ++  A  +T   ++ W +  +V +P+I+K L  E+   IG     T  D   LP   A I E  R    +P  +PH   +D  L GY +P ++ + +N W I ++P  W+             +       +  + + FG+G+R C
Sbjct:  296 DRKLDENSNIQMSDEKVVGIVNDLFGAGFDTISTALSWAVGYLVAYPDIEKGLFEEIKENIGLNRNPTISDRSNLPLTDAFILEIFRHSSFLPFTIPHCTTRDTSLNGYYIPKDTCVFINQWQINHDPKLWQDPSSFNPDRFLSEDGSEVNRLDGEKVMVFGLGKRRC 463          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP2DQ_RAT (Cytochrome P450 2D26 OS=Rattus norvegicus GN=Cyp2d26 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.794e-15
Identity = 42/163 (25.77%), Postives = 83/163 (50.92%), Query Frame = -1
Query:  268 KGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFR---YLPFGVGRRSC 747
            +    ++N+  +V ++ +A + TT  ++ W +  ++ HP++Q+++  E+D VIG+  +    D  ++P+  AVI E  R    +P  +PHM  +D K  G+ +P  + +I N   +  +   W+K               ++A GN  +   ++PF  GRR+C
Sbjct:  290 ESSFNDENLRLVVIDLFMAGMVTTSTTLSWALLLMILHPDVQRRVHEEIDEVIGQVRRPEMADQARMPFTNAVIHEVQRFADIVPTNIPHMTSRDIKFQGFLIPKGTTLIPNLSSVLKDETVWEKPLRFHPEHF------LDAQGNFVKHEAFMPFSAGRRAC 446          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP2DF_CANFA (Cytochrome P450 2D15 OS=Canis familiaris GN=CYP2D15 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 5.794e-15
Identity = 49/191 (25.65%), Postives = 92/191 (48.17%), Query Frame = -1
Query:  187 KGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITEL-DTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFR---YLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPS 747
            K    E+N+  +  ++ +A + +T  ++ W +  ++ HP++Q+++  E+D VIGR  Q+ E+ D  ++P+  AVI E  R    +P+ VPHM  +D ++ G+ +P  + +I N   +  +   WKK               ++A G+  +   ++PF  GRR C                L+Q F    P+
Sbjct:  290 KTSFNEENLCMVTSDLFIAGMVSTSITLTWALLLMILHPDVQRRVQQEIDEVIGR-EQLPEMGDQTRMPFTVAVIHEVQRFGDIVPLGVPHMTSRDTEVQGFLIPKGTTLITNLSSVLKDEKVWKKPFRFYPEHF------LDAQGHFVKHEAFMPFSAGRRVCLGEPLARMELFLFFTCLLQRFSFSVPA 473          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP2DK_MESAU (Cytochrome P450 2D20 OS=Mesocricetus auratus GN=CYP2D20 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.567e-15
Identity = 46/190 (24.21%), Postives = 88/190 (46.32%), Query Frame = -1
Query:  187 KGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFR---YLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPS 747
            +    ++N+  +V ++ +A + TT  ++ W +  ++ HP++Q ++  E+D VIG+  +    D  ++PY  AVI E  R     P+ VPHM  +D ++ G+ +P  + +I N   +  +   W+K               ++A G   +   ++PF  GRR+C                L+Q F    P+
Sbjct:  290 ESSFNDENLHVVVADLFIAGMVTTSTTLSWALLLMILHPDVQSRVQQEIDDVIGQVRRPEMADQARMPYTNAVIHEVQRFGDIAPVNVPHMTSRDVEVQGFLIPKGTTLIPNLSSVLKDETVWEKPLHFHPEHF------LDAQGRFVKQEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPA 473          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP2DR_MESAU (Cytochrome P450 2D27 OS=Mesocricetus auratus GN=CYP2D27 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.291e-14
Identity = 45/190 (23.68%), Postives = 87/190 (45.79%), Query Frame = -1
Query:  187 KGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFR---YLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPS 747
            +    ++N+  +V ++ +A + TT  ++ W +  ++ HP++Q ++  E+D VIG+  +    D  ++PY  AVI E  R     P+ +PHM   D ++ G+ +P  + +I N   +  +   W+K               ++A G   +   ++PF  GRR+C                L+Q F    P+
Sbjct:  290 ESSFNDENLRMVVADMFIAGMVTTSTTLSWALLLMILHPDVQSRVQQEIDDVIGQVRRPEMADQARMPYTNAVIHEVQRFGDIAPVNIPHMTSHDVEVQGFLIPKGTTLIPNLSSVLKDETVWEKPLHFHPEHF------LDAQGRFVKHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPA 473          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP2DJ_CALJA (Cytochrome P450 2D19 OS=Callithrix jacchus GN=CYP2D19 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.291e-14
Identity = 51/196 (26.02%), Postives = 91/196 (46.43%), Query Frame = -1
Query:  187 QTKGE----ITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFR---YLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPS 753
            +TKG       ++N+  +V ++  A + TT  ++ WG+  ++ HP++Q+++  E+D VIGR  +    D   +PY  AVI E  R    +P+ V HM  +D ++ G+ +P  + +  N   +  + A W+K               ++A G   +   +LPF  GRR+C                L+Q F    P+
Sbjct:  281 KTKGNPESSFNDENLHLVVADLFSAGMVTTSITLAWGLLLMILHPDVQRRVQQEIDDVIGRVRRPEMGDQTYMPYTTAVIHEVQRFADIVPLGVTHMTSRDIEVQGFLIPKGTTLFTNLSSVLKDEANWEKPFRFHPEHF------LDAQGRFVKPEAFLPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPA 470          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C513F_DICDI (Probable cytochrome P450 513F1 OS=Dictyostelium discoideum GN=cyp513f1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.291e-14
Identity = 53/199 (26.63%), Postives = 95/199 (47.74%), Query Frame = -1
Query:  187 KCAIDHILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPS 783
            K  ++  L+    GEI  ++VL    N+ +A  +++  ++ + +  ++N+PEIQ+K+ NE+ + + +  +I+  D  K PY  AVIKET RL    P+  PH    D ++ G+ +   ++II N +  + +   W K             +  E N N    + FG+G R C               RL++N++   PS
Sbjct:  282 KSIVEAYLENYLNGEIKFESVLSSCTNLLLAGTDSSANTLSFLLVSLINNPEIQEKVYNEIITNL-KNDEISINDRFKCPYTCAVIKETHRLYSIAPLSEPHYCSNDVEIKGFKIAKGTQIIQNIYSSSRSEQYWDKPLSFIPERFIDNANIKEKNKN---IVSFGLGLRGCIGKSFAEYMIFLTVVRLIKNYKFSNPS 476          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP1A4_CHICK (Cytochrome P450 1A4 OS=Gallus gallus GN=CYP1A4 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.202e-14
Identity = 45/173 (26.01%), Postives = 79/173 (45.66%), Query Frame = -1
Query:  268 IDHILDAQTKGEI----TEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 774
            I H  + +T  ++    ++++++ IV ++  A  +T   ++ W +     +P IQKK+  ELD  IGR  +    D   LPY +A I E  R    +P  +PH   +D  L GY +P ++ + +N W   ++   WK                  +     + L FG+G+R C
Sbjct:  297 IGHCQEKRTGEDVRVQPSDESIISIVNDLFGAGFDTVTTALSWCMMYAALYPHIQKKIQAELDQTIGRERRPRLSDRGMLPYTEAFILEAFRHSSLLPFTIPHCTTKDTVLNGYYIPKDTCVFINQWQANHDEKIWKDPPSFKPERFLNAAGTELSRTEADKVLIFGLGKRRC 469          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C508B_DICDI (Probable cytochrome P450 508B1 OS=Dictyostelium discoideum GN=cyp508b1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.202e-14
Identity = 51/168 (30.36%), Postives = 75/168 (44.64%), Query Frame = -1
Query:  199 VAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGG--YDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFEL 696
            +A  +TT  SI W +  +  HPEIQ K  NE+   +G   ++   D  K PYL A+IKE +RL    P  +PH +  D  +G   Y +P +S+I+VN   +  N   ++                   N N+  Y+PFGVG R C                ++ NF L
Sbjct:  295 LAGNDTTAASIIWFVLRMQEHPEIQLKAYNEIKDAVGDRDRVLLSDRPKTPYLNAIIKEILRLNPVGPFGLPHRSSNDIVIGNGKYFIPKDSQILVNYRGLGFNEKYFENPSQFDPSRF--------LNKNNDAYMPFGVGDRKCVGLQLAGDEQYLSFSNILLNFNL 454          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP2J6_MOUSE (Cytochrome P450 2J6 OS=Mus musculus GN=Cyp2j6 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.875e-14
Identity = 51/200 (25.50%), Postives = 83/200 (41.50%), Query Frame = -1
Query:  190 IDHILDAQTK-----GEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPP 774
            ID  L   TK         E+N++    ++  A  ETT  ++ W +  +  +PE+Q+K+  E+D VIG+       D   +PY  AVI E  R+   IP+ VP     D  L G+ +P  + ++ N   +  +P +W                  +       +LPF +G+R+C                L+Q F   PP
Sbjct:  278 IDAFLKEMTKYPEKTTSFNEENLICSTLDLFFAGTETTSTTLRWALLYMALYPEVQEKVQAEIDRVIGQKRAARLADRESMPYTNAVIHEVRRMGNIIPLNVPREVAMDTNLNGFHLPKGTMVLTNLTALHRDPKEWATPDVFNPEHFLENGQFKKRES----FLPFSMGKRACLGEQLARSELFIFFTSLMQKFTFNPP 473          
The following BLAST results are available for this feature:
BLAST of CF832404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 313
Match NameE-valueIdentityDescription
CP1A1_ORYLA4.436e-1525.60Cytochrome P450 1A1 OS=Oryzias latipes GN=cyp1a1 P... [more]
CP2DQ_RAT5.794e-1525.77Cytochrome P450 2D26 OS=Rattus norvegicus GN=Cyp2d... [more]
CP2DF_CANFA5.794e-1525.65Cytochrome P450 2D15 OS=Canis familiaris GN=CYP2D1... [more]
CP2DK_MESAU7.567e-1524.21Cytochrome P450 2D20 OS=Mesocricetus auratus GN=CY... [more]
CP2DR_MESAU1.291e-1423.68Cytochrome P450 2D27 OS=Mesocricetus auratus GN=CY... [more]
CP2DJ_CALJA1.291e-1426.02Cytochrome P450 2D19 OS=Callithrix jacchus GN=CYP2... [more]
C513F_DICDI1.291e-1426.63Probable cytochrome P450 513F1 OS=Dictyostelium di... [more]
CP1A4_CHICK2.202e-1426.01Cytochrome P450 1A4 OS=Gallus gallus GN=CYP1A4 PE=... [more]
C508B_DICDI2.202e-1430.36Probable cytochrome P450 508B1 OS=Dictyostelium di... [more]
CP2J6_MOUSE2.875e-1425.50Cytochrome P450 2J6 OS=Mus musculus GN=Cyp2j6 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832404 ID=CF832404; Name=CF832404; organism=Citrus sinensis; type=EST; length=831bp
CCACTGCCACTTGATTTGATCCGACATTGAAGAAACCATTCAACCACTTT
GAAACAGACTTAACATTACAACCAAATGGAATTGTGAAACTAGAATGATC
TAGGCTTGGCAACAATGGTCGAGTGCTTCAAAATGTGCAAACTGAACTGC
CCACCTTTCTCTGCAATGTCAATCTTACATTGACCATGAAGGAGGCAAGA
GCTCAAAGTTCTGTACCAAACGCCCAATAATGATACCAAGAATTGGCAAA
GCAAGGATAATTCCAGGGCAGCTTCTTCTCCCAACACCGAAAGGAAGGTA
ACGGAAATCATTTCCATTAGCCTCAACCTTGGACTCCTCCTCCAAAAACC
TCTCAGGCCTGAATTCTTCAGGTTTCTTCCATTGGGCGGGATTGTTGGCG
ATCCACCACGCGTTCACTATGATTTTGCTCTCAGCAGGGACGTCATATCC
TCCAAGCTTGGCGTCCTGAAGGTTCATGTGCGGCACAAGAATAGGAATTG
CCATCCTAAGGCGAATAGTTTCCTTGATCACGGCCTGAAGGTAGGGTAGT
TTGTGGGTGTCAAGCTCAGTGATTTGATGACCACGACCAATCACGGAGTC
AAGTTCATTGCAGAGCTTCTTCTGGATTTCAGGATGATTCACTATCTCTG
CAATTCCCCACTCTATCGACCAAAGAGTTGTCTCTATCGCGGCAACATTG
ATGTTCTCAACGATGTATAGAACGTTGTCCTCGGTGATTTCTCCCTTTGT
CTGAGCGTCCAAAATATGATCGATTGCGCATTTCAAGCTTTAATTACTCA
TGCTCTTCGAGCATGCGCATGTCTTTCTCTC
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