CF832404

Overview
NameCF832404
Unique NameCF832404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP2DS_MESAU (Cytochrome P450 2D28 OS=Mesocricetus auratus GN=CYP2D28A PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.591e-12
Identity = 40/190 (21.05%), Postives = 84/190 (44.21%), Query Frame = -1
Query:  187 KGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANG---NDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPS 747
            +    + N+  +V ++ +A   +T  ++ W +  ++ +P++Q+++  E+D ++G G      D  ++PY  AVI E  R     P+ +P +  +D ++ G+ +P  + +I N   +  +   W+K               ++A G       ++PF  GRR+C                L+Q F    P+
Sbjct:  290 ESSFNDQNLRMVVNDLFIAGTVSTSTTLSWALLFMIQYPDVQRRVQQEIDDILGPGRSPEMADQARMPYTNAVIHEVQRFADIAPLNLPCITSRDIEVQGFLIPKGTTLITNLSSVLKDETVWEKPLHFHPEHF------LDAQGCFVKQEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPA 473          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP2CS_MESAU (Cytochrome P450 2C28 OS=Mesocricetus auratus GN=CYP2C28 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.591e-12
Identity = 46/185 (24.86%), Postives = 85/185 (45.95%), Query Frame = -1
Query:  199 EITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGN----DFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFEL 741
            E T ++++  V ++ VA  ETT  ++ +G+  ++ H E+  K+  E+D VIGR       D  ++PY  A++ E  R    IP  VPH    + K   Y +P  + +I +   + ++  ++                 ++ NGN    D+ ++PF +G+R C                ++QNF+L
Sbjct:  281 EFTTESLMATVADVFVAGSETTSTTLRYGLLLLLKHKEVTAKVQKEIDHVIGRDRSPCMQDRTRMPYTDAMVHEVQRYVNLIPNNVPHAATCNVKFRNYVIPKGTDLITSLTSVLHDDKEFPNPKIFDPAHF------LDENGNFKKSDY-FMPFSIGKRMCMGEALARMELFLLLTTILQNFDL 458          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71AS_ARATH (Putative cytochrome P450 71A28 OS=Arabidopsis thaliana GN=CYP71A28 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.591e-12
Identity = 43/165 (26.06%), Postives = 70/165 (42.42%), Query Frame = -1
Query:  268 LDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 762
            L+   + E+   ++  I+    +    TT  +I+W +  +V HPE  KKL  E+ +       + E +   + YL+AVIKE  RL    P+ +P    +D             + +NAW I  +  +W                 +   G DF ++PFG GRR C
Sbjct:  278 LEKTNEFELERSDIRLIILEFFLGGTTTTFTAIDWAMTLVVRHPESMKKLQEEIQTYSRNKLYVPEEEVENMKYLKAVIKEVFRLHPPGPLSIPRQLSED-------------VFINAWAIHRDTEKWGPYAEEFKPERHLDL-PLNFQGQDFNFIPFGSGRRLC 428          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C5083_DICDI (Probable cytochrome P450 508A3 OS=Dictyostelium discoideum GN=cyp508a3-1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.591e-12
Identity = 43/181 (23.76%), Postives = 87/181 (48.07%), Query Frame = -1
Query:  202 TEDNVLYIVENIN---VAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFE 735
            ++D++L I+  IN   +A  +T+  S+E+ +  +VN+PEIQ+K+ +E+   +   +++   D    PY  + IKET+R +    + VP    QD  +G   +P +++I +N + ++ N   ++              S+      +  +LPF +G R+C                ++ NF+
Sbjct:  273 SDDDILTIIATINDLFLAGTDTSSASLEYMVMMLVNYPEIQEKVYDEIKLTVNGRNKVLLSDRQFTPYTVSFIKETLRYKPPSSVGVPRTTSQDIIIGDKFIPKDAQIFINYYGLSRNQDYFEN-------PEQFEPSRFMNPDTNIAFLPFSIGTRNCVGQNFALDEMFLAFSNIILNFK 446          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP4V3_RAT (Cytochrome P450 4V3 OS=Rattus norvegicus GN=Cyp4v3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.996e-12
Identity = 40/159 (25.16%), Postives = 82/159 (51.57%), Query Frame = -1
Query:  268 EITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQ-ITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 741
            +++ +++   V+       +TT  +I W +  + ++PE+Q+K+  ELD V GR H+ +T  D  KL YL  VIKET+R+  ++P+    ++ +D ++ GY +   ++ ++  + +  +P  +               S+     + + Y+PF  G R+C
Sbjct:  313 KLSHEDIREEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQRKVDKELDDVFGRSHRPVTLEDLKKLKYLDCVIKETLRVFPSVPLFARSLS-EDCEVAGYKISKGTEAVIIPYALHRDPRYFPDPEEFQPERFFPENSQ---GRHPYAYVPFSAGPRNC 467          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP2CV_CAPAE (Cytochrome P450 2C31 (Fragment) OS=Capra aegagrus GN=CYP2C31 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.996e-12
Identity = 43/183 (23.50%), Postives = 80/183 (43.72%), Query Frame = -1
Query:  193 EITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLP 741
            E T DN++  V ++  A  ETT  ++ +G+  ++ HPE+  K+  E+D V+GR       D  ++PY  AV+ E  R    +P  +PH+  QD K   Y +P  + I+ +   + ++  ++                  +   +   ++ F  G+R C                ++Q+F L P
Sbjct:   75 EFTMDNLITTVWDVFSAGTETTSLTLRYGLLLLLKHPEVTAKVQEEIDRVVGRNRSPCMQDRSRMPYTDAVLHEIQRYIDLVPSNLPHVATQDVKFREYLIPKGTAILTSLTSVLHDGKEFPNPGQFDPAHFLDESGNFKKTDH---FMAFSAGKRVCVGEGLARMELFLLLVSILQHFTLKP 254          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP2C2_RABIT (Cytochrome P450 2C2 OS=Oryctolagus cuniculus GN=CYP2C2 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.996e-12
Identity = 47/189 (24.87%), Postives = 86/189 (45.50%), Query Frame = -1
Query:  193 KGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFR----YLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLP 747
            + E T +N+L  V ++ +A  ETT  ++ +G+  ++ HPE+  K+  E++ VIGR       D  ++PY  A + E  R    IP  VPH  + + K   Y +P  + ++ +   + ++  ++                 ++A+GN FR    ++PF  G+R C                ++QNF   P
Sbjct:  279 QSEFTIENLLTTVSDVFMAGTETTSTTLRYGLLLLMKHPEVIAKVQEEIERVIGRHRSPCMQDRSRMPYTDATVHEIQRYINLIPNNVPHTTICNLKFRNYLIPKGTDVLTSLSSVLHDDKEFPNPDRFDPGHF------LDASGN-FRKSDYFMPFSTGKRVCVGEALARMELFLFLTAILQNFTPKP 460          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP2CN_RAT (Cytochrome P450 2C23 OS=Rattus norvegicus GN=Cyp2c23 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.830e-12
Identity = 48/183 (26.23%), Postives = 79/183 (43.17%), Query Frame = -1
Query:  199 KGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFEL 747
            K E   +N+     N+  A  ETT  ++ +G+  ++ +PE+Q K+  ELD VIGR    +  D  KLPY  AV+ E  R    +P  +PH  +QD K   Y +P  + ++     +++     K+              K         ++PF +G+R+C                L+Q F L
Sbjct:  283 KSEFHLENLAVCGSNLFTAGTETTSTTLRFGLLLLMKYPEVQAKVHEELDRVIGRHQPPSMKDKMKLPYTDAVLHEIQRYITLLPSSLPHAVVQDTKFRDYVIPKGTTVLP---MLSSVMLDQKEFANPEKFDPGHFLDKNGCFKKTDYFVPFSLGKRACVGESLARMELFLFFTTLLQKFSL 462          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP2C3_RABIT (Cytochrome P450 2C3 OS=Oryctolagus cuniculus GN=CYP2C3 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.023e-11
Identity = 48/200 (24.00%), Postives = 88/200 (44.00%), Query Frame = -1
Query:  193 IDHILDAQTK------GEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLP 774
            +DH L    K       E T DN++  + ++  A  +TT  ++++ +  ++ HPEI  K+  E++ VIGR       D  ++PY  AV+ E  R    +P  +PH   QD +  GY +P  + II +   +  +  ++                  +   +D+ ++PF  G+R+C                ++Q+F L P
Sbjct:  263 VDHFLIKMEKEKHKKQSEFTMDNLITTIWDVFSAGTDTTSNTLKFALLLLLKHPEITAKVQEEIEHVIGRHRSPCMQDRTRMPYTDAVMHEIQRYVDLVPTSLPHAVTQDIEFNGYLIPKGTDIIPSLTSVLYDDKEFPNPEKFDPGHFLDESGNFKK--SDY-FMPFSAGKRACVGEGLARMELFLLLTTILQHFTLKP 459          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP2H2_CHICK (Cytochrome P450 2H2 OS=Gallus gallus GN=CYP2H2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.336e-11
Identity = 54/207 (26.09%), Postives = 90/207 (43.48%), Query Frame = -1
Query:  193 CAIDHILDAQTKGEITEDNVLYIVENIN-------VAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFR----YLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLP 780
            C  D I     K +  ++N  + VE++        +A   TT  ++ +G+  ++ HPEI++K+  E+D V+GR       D  +LPY  AVI E  R    +P+ +P   ++D KL  Y +P ++ I      I  +  ++                 + ANG  FR    ++PF  G+R C                ++QNF L P
Sbjct:  262 CPRDFIDAFINKMQQEKENSYFTVESLTRTTLDLFLAGTGTTSTTLRYGLLILLKHPEIEEKMHKEIDRVVGRDRSPCMADRSQLPYTDAVIHEIQRFIDFLPVNLPRAVIKDTKLRDYFIPKDTMIFPLLSPILQDCKEFPNPEKFDPGHF------LNANGT-FRKSNYFMPFSAGKRICAGEGLARMELFLFLTSILQNFSLKP 461          
The following BLAST results are available for this feature:
BLAST of CF832404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 313
Match NameE-valueIdentityDescription
CP2DS_MESAU4.591e-1221.05Cytochrome P450 2D28 OS=Mesocricetus auratus GN=CY... [more]
CP2CS_MESAU4.591e-1224.86Cytochrome P450 2C28 OS=Mesocricetus auratus GN=CY... [more]
C71AS_ARATH4.591e-1226.06Putative cytochrome P450 71A28 OS=Arabidopsis thal... [more]
C5083_DICDI4.591e-1223.76Probable cytochrome P450 508A3 OS=Dictyostelium di... [more]
CP4V3_RAT5.996e-1225.16Cytochrome P450 4V3 OS=Rattus norvegicus GN=Cyp4v3... [more]
CP2CV_CAPAE5.996e-1223.50Cytochrome P450 2C31 (Fragment) OS=Capra aegagrus ... [more]
CP2C2_RABIT5.996e-1224.87Cytochrome P450 2C2 OS=Oryctolagus cuniculus GN=CY... [more]
CP2CN_RAT7.830e-1226.23Cytochrome P450 2C23 OS=Rattus norvegicus GN=Cyp2c... [more]
CP2C3_RABIT1.023e-1124.00Cytochrome P450 2C3 OS=Oryctolagus cuniculus GN=CY... [more]
CP2H2_CHICK1.336e-1126.09Cytochrome P450 2H2 OS=Gallus gallus GN=CYP2H2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832404 ID=CF832404; Name=CF832404; organism=Citrus sinensis; type=EST; length=831bp
CCACTGCCACTTGATTTGATCCGACATTGAAGAAACCATTCAACCACTTT
GAAACAGACTTAACATTACAACCAAATGGAATTGTGAAACTAGAATGATC
TAGGCTTGGCAACAATGGTCGAGTGCTTCAAAATGTGCAAACTGAACTGC
CCACCTTTCTCTGCAATGTCAATCTTACATTGACCATGAAGGAGGCAAGA
GCTCAAAGTTCTGTACCAAACGCCCAATAATGATACCAAGAATTGGCAAA
GCAAGGATAATTCCAGGGCAGCTTCTTCTCCCAACACCGAAAGGAAGGTA
ACGGAAATCATTTCCATTAGCCTCAACCTTGGACTCCTCCTCCAAAAACC
TCTCAGGCCTGAATTCTTCAGGTTTCTTCCATTGGGCGGGATTGTTGGCG
ATCCACCACGCGTTCACTATGATTTTGCTCTCAGCAGGGACGTCATATCC
TCCAAGCTTGGCGTCCTGAAGGTTCATGTGCGGCACAAGAATAGGAATTG
CCATCCTAAGGCGAATAGTTTCCTTGATCACGGCCTGAAGGTAGGGTAGT
TTGTGGGTGTCAAGCTCAGTGATTTGATGACCACGACCAATCACGGAGTC
AAGTTCATTGCAGAGCTTCTTCTGGATTTCAGGATGATTCACTATCTCTG
CAATTCCCCACTCTATCGACCAAAGAGTTGTCTCTATCGCGGCAACATTG
ATGTTCTCAACGATGTATAGAACGTTGTCCTCGGTGATTTCTCCCTTTGT
CTGAGCGTCCAAAATATGATCGATTGCGCATTTCAAGCTTTAATTACTCA
TGCTCTTCGAGCATGCGCATGTCTTTCTCTC
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