CF832404

Overview
NameCF832404
Unique NameCF832404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 4.729e-25
Identity = 64/177 (36.16%), Postives = 100/177 (56.50%), Query Frame = -1
Query:  268 IDHILDAQTKGE------ITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIG--RGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 774
            ID IL+   K E      +T D++  I++NI +A ++T+  ++ W +AE+V +P + KK   E+ + IG  +  +I E D  KL YL+ VIKET+RL    P+L+P   + D K+ GYD+P ++ ++VNAW I  NP  W+             +  ++  GN F  LPFG GR+ C
Sbjct:  271 IDSILETIYKQEQDESFKLTIDHLKGIIQNIYLAGVDTSAITMIWAMAELVKNPRVMKKAQEEIRTCIGIKQKERIEEEDVDKLQYLKLVIKETLRLHPPAPLLLPRETMADIKIQGYDIPRKTILLVNAWSIGRNPELWEN--PEEFNPERFIDCPMDYKGNSFEMLPFGSGRKIC 445          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.347e-24
Identity = 64/198 (32.32%), Postives = 102/198 (51.52%), Query Frame = -1
Query:  193 IDHILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILV-PHMNLQDAKLG-GYDVPAESKIIVNAWWIANNPAQWKK--XXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLP 774
            +D +L  Q + ++ E++++ ++  +     +TT    EW +AE+V HPE QKK   ELD+V+G    + + D  KLPY+QAV+KE +R+    P+L    ++ +D  +G G  VPA +  +VN W I ++P  W+                 +V+  GND R  PFG GRR C               +L+ +FE LP
Sbjct:  319 VDVLLSLQGEDKLDEEDMIAVLWEMIFRGTDTTALLTEWTMAELVLHPEAQKKAQAELDAVVGHDRSVKDSDIPKLPYIQAVVKEALRMHPPGPLLSWARLSTEDVNMGDGMCVPAGTTAMVNMWSITHDPNIWESPYEFRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEWLP 516          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.347e-24
Identity = 62/190 (32.63%), Postives = 100/190 (52.63%), Query Frame = -1
Query:  187 TKGE-ITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKK-XXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPS 750
            ++GE ++  N+  ++ N+  A  +T+  +IEW +AE++ +P I KK   E+D VIGR  ++ E D   LPYL+A+ KET R   + P+ +P ++ +   + GY +P  +++ VN W I  +P  W+               SK++  GNDF  +PFG GRR C              G LV +F+   PS
Sbjct:  281 SEGERLSTTNIKALLLNLFTAGTDTSSSAIEWALAEMMKNPAILKKAQAEMDQVIGRNRRLLESDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPCIVDGYYIPKNTRLSVNIWAIGRDPQVWENPLEFNPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPS 470          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.347e-24
Identity = 59/160 (36.88%), Postives = 93/160 (58.13%), Query Frame = -1
Query:  268 EITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIG--RGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 741
            ++T D++  ++ NI  A I+T+  ++ W +AE+V +P + KK  +E+ + IG  +  +I E D  KL YL+ V+KET+RL  A P+L+P   + D K+ GYD+P +  ++VNAW I  +P  WK             +  V+  G+ F  LPFG GRR C
Sbjct:  289 KLTVDHLKGVLSNIYHAGIDTSAITLIWAMAELVRNPRVMKKAQDEIRTCIGIKQEGRIMEEDLDKLQYLKLVVKETLRLHPAAPLLLPRETMADIKIQGYDIPQKRALLVNAWSIGRDPESWKN--PEEFNPERFIDCPVDYKGHSFELLPFGSGRRIC 446          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.065e-24
Identity = 60/180 (33.33%), Postives = 91/180 (50.56%), Query Frame = -1
Query:  202 EITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFE 741
            E    N+  +  ++ VA  +TT  +IEW + E++  P I  K   EL+ VIG+G  + E D  +LPYL  ++KE +RL    P+L+P   +   +L GY +PA + + VNAW I  +P  W              ES+++  G+DF  +PFG GRR C              G L+ NF+
Sbjct:  277 EFNHTNIKALFLDLFVAGTDTTSITIEWAMTELLRKPHIMSKAKEELEKVIGKGSIVKEDDVLRLPYLSCIVKEVLRLHPPSPLLLPRKVVTQVELSGYTIPAGTLVFVNAWAIGRDPTVW--DDSLEFKPQRFLESRLDVRGHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFD 454          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.065e-24
Identity = 59/186 (31.72%), Postives = 99/186 (53.23%), Query Frame = -1
Query:  268 CAIDHILDA--------QTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANG-------NDFRYLPFGVGRRSC 780
            C +  I+D          T  ++T + +  I   +  A +ET+   +EW ++E++ HP   KKL  E++SV+G+   + E D   + YL  V+KET+RL  ++P+ +PH +L+   +GGY +P ++ +I+N W I  +P+ W                ++E NG       +DFR LPFG GRR+C
Sbjct:  283 CHVKDIIDVLLEMAKNDNTGAKVTREIIKAITYELFSAGMETSANVLEWAMSELLRHPHAMKKLQQEIESVVGQQGTVKESDLASIVYLHCVVKETLRLYPSLPLALPHESLEAVTVGGYYIPKKTMVIMNLWAIGRDPSVW---GADASEFKPERFMQMEENGIDLSGGQSDFRMLPFGAGRRTC 465          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.228e-24
Identity = 64/194 (32.99%), Postives = 102/194 (52.58%), Query Frame = -1
Query:  202 IDHILDAQTKGEI---TEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFE 774
            IDH+L  Q K +I   T+  +  I+  + +A   T+  ++EW ++ ++NHP++  K  +E+D+ +G    I E D  +LPYL+ ++ ET+RL  A P+LVPHM  +D K+G YD+P  + ++VNAW I  +P  W                + E      + L FG+GRR+C              G L+Q FE
Sbjct:  277 IDHLLVLQ-KSDIEYYTDQIIKGIILIMVIAGTNTSAVTLEWALSNLLNHPDVISKARDEIDNRVGLDRLIEEADLSELPYLKNIVLETLRLHPATPLLVPHMASEDCKIGSYDMPRGTTLLVNAWAIHRDPNTW-------DDPDSFKPERFEKEEEAQKLLAFGLGRRACPGSGLAQRIVGLALGSLIQCFE 462          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.228e-24
Identity = 61/190 (32.11%), Postives = 99/190 (52.11%), Query Frame = -1
Query:  187 TKGE-ITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKK-XXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPS 750
            ++GE ++  N+  ++ N+  A  +T+  +IEW +AE++ +P I KK   E+D VIG   ++ E D   LPYL+A+ KET R   + P+ +P ++ +   + GY +P  +++ VN W I  +P  W+               SK++  GNDF  +PFG GRR C              G LV +F+   PS
Sbjct:  281 SEGERLSTTNIKALLLNLFTAGTDTSSSAIEWALAEMMKNPAILKKAQGEMDQVIGNNRRLLESDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPCIVDGYYIPKNTRLSVNIWAIGRDPEVWENPLEFYPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPS 470          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.828e-24
Identity = 52/165 (31.52%), Postives = 99/165 (60.00%), Query Frame = -1
Query:  268 DAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKK-XXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 759
            D  ++ ++T++N+   + +I VA  +T+  ++EW +AE++N+P + +K   E+D+V+G    I E D   LPYLQA+++ET+R+    P++V   + +   + GY++PA++++ VN W I  +P  W+              +S+++  G  + ++PFG GRRSC
Sbjct:  277 DDSSEIKLTKENIKAFIMDIFVAGTDTSAATMEWAMAELINNPCVLEKARQEIDAVVGNSRIIEESDIVNLPYLQAIVRETLRIHPGGPLIVRESS-KSVVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSC 440          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP17A_ICTPU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalurus punctatus GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.918e-24
Identity = 61/188 (32.45%), Postives = 95/188 (50.53%), Query Frame = -1
Query:  190 ITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGN-----DFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPP 738
            +T+D++L  V +I  A +ETT   ++W I  +++HP++Q+K+  ELD+ IGR       D   LPYL+A I+E +R+R   P+L+PH+ L DA +G Y V   +++IVN W + ++  +WK                +   GN        YLPFG G R C                ++Q F L  P
Sbjct:  290 LTDDHLLMTVGDIFGAGVETTTTVLKWSILYLIHHPQVQRKIQEELDAKIGRDRHPQVNDRGNLPYLEATIREVLRIRPVSPLLIPHVALSDANIGEYTVQKGTRVIVNLWSLHHDEKEWKNPELFNPERF------LNEEGNSLCCPSLSYLPFGAGVRVCLGEALAKLELFLFLSWILQRFTLEVP 471          
The following BLAST results are available for this feature:
BLAST of CF832404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 313
Match NameE-valueIdentityDescription
C71B3_ARATH4.729e-2536.16Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C78A4_PINRA2.347e-2432.32Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C75A1_PETHY2.347e-2432.63Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C71B4_ARATH2.347e-2436.88Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C76B1_HELTU3.065e-2433.337-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C75A1_PINTA3.065e-2431.72Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C81D1_ARATH5.228e-2432.99Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C75A3_PETHY5.228e-2432.11Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C93A2_SOYBN6.828e-2431.52Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
CP17A_ICTPU8.918e-2432.45Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832404 ID=CF832404; Name=CF832404; organism=Citrus sinensis; type=EST; length=831bp
CCACTGCCACTTGATTTGATCCGACATTGAAGAAACCATTCAACCACTTT
GAAACAGACTTAACATTACAACCAAATGGAATTGTGAAACTAGAATGATC
TAGGCTTGGCAACAATGGTCGAGTGCTTCAAAATGTGCAAACTGAACTGC
CCACCTTTCTCTGCAATGTCAATCTTACATTGACCATGAAGGAGGCAAGA
GCTCAAAGTTCTGTACCAAACGCCCAATAATGATACCAAGAATTGGCAAA
GCAAGGATAATTCCAGGGCAGCTTCTTCTCCCAACACCGAAAGGAAGGTA
ACGGAAATCATTTCCATTAGCCTCAACCTTGGACTCCTCCTCCAAAAACC
TCTCAGGCCTGAATTCTTCAGGTTTCTTCCATTGGGCGGGATTGTTGGCG
ATCCACCACGCGTTCACTATGATTTTGCTCTCAGCAGGGACGTCATATCC
TCCAAGCTTGGCGTCCTGAAGGTTCATGTGCGGCACAAGAATAGGAATTG
CCATCCTAAGGCGAATAGTTTCCTTGATCACGGCCTGAAGGTAGGGTAGT
TTGTGGGTGTCAAGCTCAGTGATTTGATGACCACGACCAATCACGGAGTC
AAGTTCATTGCAGAGCTTCTTCTGGATTTCAGGATGATTCACTATCTCTG
CAATTCCCCACTCTATCGACCAAAGAGTTGTCTCTATCGCGGCAACATTG
ATGTTCTCAACGATGTATAGAACGTTGTCCTCGGTGATTTCTCCCTTTGT
CTGAGCGTCCAAAATATGATCGATTGCGCATTTCAAGCTTTAATTACTCA
TGCTCTTCGAGCATGCGCATGTCTTTCTCTC
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