CF832404

Overview
NameCF832404
Unique NameCF832404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 8.918e-24
Identity = 59/173 (34.10%), Postives = 100/173 (57.80%), Query Frame = -1
Query:  268 IDHILDAQT----KGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 774
            +D +L  Q+    + E+ +  +  I+ ++ +A   TTL  +EW + E++ +P++ KKL  E+ S   +   +TE +  K+ YLQAVIKE +RLR   P+LVP +  +D KL GY++PA +++IVNAW I  +   W              ++ ++  G DF+++PFG G+R C
Sbjct:  269 VDKLLTIQSDKTGQFELEKSALKLIIWDMFLAGTATTLSFLEWAMTELMRNPKVMKKLQEEIRSSSPQDLFVTEKEAEKMNYLQAVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRDTTTW-GTDAEEFKPERHLDTNLDFQGQDFKFIPFGSGKRIC 440          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.165e-23
Identity = 52/165 (31.52%), Postives = 98/165 (59.39%), Query Frame = -1
Query:  268 DAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKK-XXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 759
            D  ++ ++ ++N+   + +I +A  +T+  ++EW +AE++N+P + +K   E+D+V+G+   + E D   LPYLQ +++ET+RL  A P+L    + + A + GYD+PA++++ VN W I  +P  W+              +S+++  G  +  LPFG GRR+C
Sbjct:  285 DESSEIKLNKENIKAFILDILIAGTDTSAVTMEWAMAELINNPGVLEKARQEMDAVVGKSRIVEESDIANLPYLQGIVRETLRLHPAGPLLFRESS-RRAVVCGYDIPAKTRLFVNVWAIGRDPNHWENPLEFRPERFVENGKSQLDVRGQHYHLLPFGSGRRAC 448          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.165e-23
Identity = 64/173 (36.99%), Postives = 92/173 (53.18%), Query Frame = -1
Query:  268 IDHILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGH--QITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKK--XXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 774
            ID  L    +   T DNV  ++ N+  AAIET+   +E  +AE++NH  + KKL  E+ +         I E D   LPYL+A +KE +RL    P+L+PH +  D ++ GY +PA  +++VN W I  +PA W+K              +     +G DFRYLPFG GRR C
Sbjct:  303 IDIFLSRYEEYGFTMDNVKSLLMNVFEAAIETSYLVLESAMAELMNHRRVMKKLQAEVRAYGAEKKLDMIREDDLSSLPYLKASMKEALRLHPPGPLLLPHYSTADCQIDGYHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRIC 475          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.521e-23
Identity = 57/173 (32.95%), Postives = 99/173 (57.23%), Query Frame = -1
Query:  268 ILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIG-----RGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEAN--GNDFRYLPFGVGRRSC 765
            +L  Q +  +T DN+  I+ ++  A IET+  ++E+G+AE++N+  + +KL  E+ + +G     +   + E D   +PYL+A IKET+RL    P L+PH +  D+++ GY VPA ++++V+AW +  +   W+K               V+ +  G D R++PFG GRR C
Sbjct:  308 LLSIQQEYGLTTDNLKAILVDMFEAGIETSYLTLEYGMAELINNRHVMEKLQTEVRTTMGSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRIC 480          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 2.595e-23
Identity = 64/192 (33.33%), Postives = 92/192 (47.92%), Query Frame = -1
Query:  187 DAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQW-KKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPS 759
            DAQ    +T + V    ++I  AA++    ++EW +AE+VN+PE+  K   ELD V+GR   + E D  KL Y++A I+E  RL    P  VPH+ L D  + GY VP  S +I++   +  NP  W +              S V    ND R++ F  GRR C              GRL+Q F    P+
Sbjct:  329 DAQGNPLLTIEEVKAQSQDITFAAVDNPSNAVEWALAEMVNNPEVMAKAMEELDRVVGRERLVQESDIPKLNYVKACIREAFRLHPVAPFNVPHVALADTTIAGYRVPKGSHVILSRTGLGRNPRVWDEPLRFYPDRHLATAASDVALTENDLRFISFSTGRRGCIAASLGTAMSVMLFGRLLQGFTWSKPA 520          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.595e-23
Identity = 59/181 (32.60%), Postives = 93/181 (51.38%), Query Frame = -1
Query:  187 NVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKK-XXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPS 726
            N+  ++ N+  A  +T+   IEW +AE++ +P I K+   E+D VIGR  +  E D  KLPYLQA+ KE  R   + P+ +P +  Q  ++ G+ +P  +++ VN W I  +P+ W+               +K++  GNDF  +PFG GRR C              G LV +F+   PS
Sbjct:  294 NIKALLLNMFTAGTDTSSSVIEWALAELLKNPIILKRAQEEMDGVIGRDRRFLEADISKLPYLQAICKEAFRKHPSTPLNLPRIASQACEVNGHYIPKGTRLSVNIWAIGRDPSLWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFDWELPS 474          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.595e-23
Identity = 54/158 (34.18%), Postives = 88/158 (55.70%), Query Frame = -1
Query:  268 EITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 741
            ++T ++   I+ N+ +A ++T+  ++ W +  ++ +P + KK   E+  VI     ITE D  +L YL+ VIKET+R+   +P+L+P    +  K+GGYD+P ++ I VN W +  NP  WK              S+++  G DF  LPFG GRR C
Sbjct:  281 QLTRNHTKGILLNVLIAGVDTSGHTVTWVMTHLIKNPRVMKKAQAEVREVIKNKDDITEEDIERLEYLKMVIKETLRINPLVPLLIPREASKYIKIGGYDIPKKTWIYVNIWAVQRNPNVWK--DPEVFIPERFMHSEIDYKGVDFELLPFGSGRRMC 436          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.389e-23
Identity = 54/160 (33.75%), Postives = 90/160 (56.25%), Query Frame = -1
Query:  268 EITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQ--ITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 741
            E T DNV  ++ +I VA  +T   ++ WG+  ++ +P++ KK   E+   +       +TE D   LPY +A++KET+R+   IP+L+P   +QD K+ GYD+PA + + VNAW ++ +  +W              E +V+  G D+ ++PFG GRR C
Sbjct:  284 EFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEW-GPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMC 442          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.426e-23
Identity = 53/166 (31.93%), Postives = 93/166 (56.02%), Query Frame = -1
Query:  268 ILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 765
            IL+   + E+  +++ +++ ++  A  +T+  ++EW +AE++ +P+   K   E+D V+G+   + E D   LPYLQAV+KET RL  A P+LVP     D ++ G+ VP +++++VN W I  +P+ W+                ++  G D+   PFG GRR C
Sbjct:  287 ILNEGDEAELDNNDIEHLLLDMFTAGTDTSSSTLEWAMAELLRNPKTMVKAQAEMDRVLGQNSVVQESDISGLPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWEN--PSQFEPERFMGKDIDVKGRDYELTPFGGGRRIC 450          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.426e-23
Identity = 56/171 (32.75%), Postives = 93/171 (54.39%), Query Frame = -1
Query:  268 IDHILDAQT--KGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 774
            +D +LD     + E+  +++++++ ++  A  +T   ++EW +AE++ +PE   K   E+D VIG+   + E D   LPYLQAV+KET RL  A P+LVP     D ++ G+ VP ++++ VN W I  +P  W+                ++  G D+   PFG GRR C
Sbjct:  283 VDVLLDLTEGDEAELNTNDIVHLLLDLFGAGTDTNSSTVEWAMAELLRNPETMVKAQAEIDCVIGQKGVVEESDISALPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVFVNVWAIGRDPNVWEN--SSRFKPERFLGKDIDLRGRDYELTPFGAGRRIC 451          
The following BLAST results are available for this feature:
BLAST of CF832404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 313
Match NameE-valueIdentityDescription
C71AK_ARATH8.918e-2434.10Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C93A3_SOYBN1.165e-2331.52Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71C3_MAIZE1.165e-2336.99Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C71C2_MAIZE1.521e-2332.95Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C79A1_SORBI2.595e-2333.33Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
C75A5_EUSGR2.595e-2332.60Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71BE_ARATH2.595e-2334.18Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C83A1_ARATH3.389e-2333.75Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C76C4_ARATH4.426e-2331.93Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH4.426e-2332.75Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01M23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832404 ID=CF832404; Name=CF832404; organism=Citrus sinensis; type=EST; length=831bp
CCACTGCCACTTGATTTGATCCGACATTGAAGAAACCATTCAACCACTTT
GAAACAGACTTAACATTACAACCAAATGGAATTGTGAAACTAGAATGATC
TAGGCTTGGCAACAATGGTCGAGTGCTTCAAAATGTGCAAACTGAACTGC
CCACCTTTCTCTGCAATGTCAATCTTACATTGACCATGAAGGAGGCAAGA
GCTCAAAGTTCTGTACCAAACGCCCAATAATGATACCAAGAATTGGCAAA
GCAAGGATAATTCCAGGGCAGCTTCTTCTCCCAACACCGAAAGGAAGGTA
ACGGAAATCATTTCCATTAGCCTCAACCTTGGACTCCTCCTCCAAAAACC
TCTCAGGCCTGAATTCTTCAGGTTTCTTCCATTGGGCGGGATTGTTGGCG
ATCCACCACGCGTTCACTATGATTTTGCTCTCAGCAGGGACGTCATATCC
TCCAAGCTTGGCGTCCTGAAGGTTCATGTGCGGCACAAGAATAGGAATTG
CCATCCTAAGGCGAATAGTTTCCTTGATCACGGCCTGAAGGTAGGGTAGT
TTGTGGGTGTCAAGCTCAGTGATTTGATGACCACGACCAATCACGGAGTC
AAGTTCATTGCAGAGCTTCTTCTGGATTTCAGGATGATTCACTATCTCTG
CAATTCCCCACTCTATCGACCAAAGAGTTGTCTCTATCGCGGCAACATTG
ATGTTCTCAACGATGTATAGAACGTTGTCCTCGGTGATTTCTCCCTTTGT
CTGAGCGTCCAAAATATGATCGATTGCGCATTTCAAGCTTTAATTACTCA
TGCTCTTCGAGCATGCGCATGTCTTTCTCTC
back to top