CF832404

Overview
NameCF832404
Unique NameCF832404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.682e-22
Identity = 52/169 (30.77%), Postives = 90/169 (53.25%), Query Frame = -1
Query:  268 IDHILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 774
            +    D Q   ++T DN+  I+ ++     ET   +IEW + E++  PE  K++  EL  V+G   ++ E D  KL YL+  +KET+R+   IP+L+ H   +D  + G+ +P +S++++NA+ I  +P  W                  +  G++F ++PFG GRRSC
Sbjct:  292 VSETADLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWALTELLRSPEDLKRVQQELAEVVGLDRRVEESDIEKLTYLKCTLKETLRMHPPIPLLL-HETAEDTSIDGFFIPKKSRVMINAFAIGRDPTSW-TDPDTFRPSRFLEPGVPDFKGSNFEFIPFGSGRRSC 458          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.682e-22
Identity = 58/169 (34.32%), Postives = 84/169 (49.70%), Query Frame = -1
Query:  187 AAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPS 693
            A  ET+  +IEW + E+  +P+I  KL +EL +V+G    + E D   LPYL+A +KET+RL    P+L+P   L+   +  Y +P + +I+VNAW I  +P  W               S V+  GNDF  +PFG GRR C                 VQN +   P+
Sbjct:  292 AGTETSASTIEWAMTELTKNPKITAKLRSELQTVVGE-RSVKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTW--IDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPN 457          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C79B2_ARATH (Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP79B2 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.682e-22
Identity = 54/187 (28.88%), Postives = 91/187 (48.66%), Query Frame = -1
Query:  205 ILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNF 765
            I D Q    +T D +   ++ + +AA +    ++EW +AE+VN PEI +K   E+D V+G+   + E D  KL Y++A+++E  RL       +PH+ L D  + GY +P  S+++++ + +  NP  W               S+V    ND R++ F  G+R C               RL+Q F
Sbjct:  312 IKDEQGNPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMVNKPEILRKAMEEIDRVVGKERLVQESDIPKLNYVKAILREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWADPLCFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTALTTMMLARLLQGF 498          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.682e-22
Identity = 52/154 (33.77%), Postives = 85/154 (55.19%), Query Frame = -1
Query:  268 NVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKK-XXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 726
            N+  ++ N+  A  +T+   IEW +AE++ +P I ++   E+D VIGR  +  E D  KLPYLQA+ KE  R   + P+ +P +  Q  ++ G+ +P  +++ VN W I  +P+ W+               +K++  GNDF  +PFG GRR C
Sbjct:  294 NIKALLLNMFTAGTDTSSSVIEWALAELLKNPIILRRAQEEMDGVIGRDRRFLEADISKLPYLQAICKEAFRKHPSTPLNLPRIASQACEVNGHYIPKGTRLSVNIWAIGRDPSVWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRIC 447          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.682e-22
Identity = 54/176 (30.68%), Postives = 91/176 (51.70%), Query Frame = -1
Query:  202 NVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKK-XXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFE 726
            NV  ++ ++  A  +T+   IEW +AE++NH +I  +   E+D VIGR  ++ + D   LPY QA+ KET R   + P+ +P ++ +  ++ G+ +P  +++IVN W I  +P  W+               +K++  GN F  +PFG GRR C              G LV +F+
Sbjct:  307 NVKALLLDLFTAGTDTSSSVIEWALAEMLNHRQILNRAHEEMDQVIGRNRRLEQSDIPNLPYFQAICKETFRKHPSTPLNLPRISTEACEVDGFHIPKNTRLIVNIWAIGRDPKVWENPLDFTPERFLSEKHAKIDPRGNHFELIPFGAGRRICAGARMGAASVEYILGTLVHSFD 482          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.682e-22
Identity = 55/159 (34.59%), Postives = 95/159 (59.75%), Query Frame = -1
Query:  268 EITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIG-RGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 741
            ++T D++  I+ +I +A + T+  +I W + E++ +P + KK+ +E+ +V+G +  +ITE D ++L Y + VIKET RL  A P+L+P   +   K+ GYD+P +++I+VN + I  +P  W+             +S V+  G +F  LPFG GRR C
Sbjct:  287 KLTTDHIKGIISDIFLAGVNTSATTILWAMTELIRNPRVMKKVQDEVRTVLGEKRDRITEQDLNQLNYFKLVIKETFRLHPAAPLLLPREAMAKIKIQGYDIPEKTQIMVNVYAIGRDPDLWEN--PEEFKPERFVDSSVDYRGLNFELLPFGSGRRIC 443          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.869e-22
Identity = 55/180 (30.56%), Postives = 91/180 (50.56%), Query Frame = -1
Query:  202 EITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFE 741
            EI   ++  IV N+ V   +T+   +EW + E++ HP+  K+L  E+ ++      ++E +   + YL+AVIKE +RL   +P++VPH + QD +LG + +PA +++++NAW I    A W              +S V+  G  F  +PFG GRR C                LV  F+
Sbjct:  275 EINRVSIKAIVMNVFVGGTDTSSTLMEWAMTELLRHPKCLKRLQEEVRTICKDKSSVSEEEIQNMSYLKAVIKEALRLHPPLPLMVPHESTQDVRLGDHHIPAGTQVLINAWAIGREAATW-GPDVEEFRPERHLDSSVDYRGQAFELIPFGSGRRICPAISFAVVLNEVVLANLVHRFD 453          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.869e-22
Identity = 51/159 (32.08%), Postives = 93/159 (58.49%), Query Frame = -1
Query:  268 EITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIG-RGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 741
            ++  +++ +++ ++ +  I T+   +EW + E++ +PE  KKL NE+ S I   G  I E +   + YL+AVIKE  R+   +P+++P +  +D K+ GYD+ A +++++NAW I  +PA W              +S ++ +G D +Y+PFG GRR C
Sbjct:  282 KVQRNDIKFMILDMFIGGISTSSTLLEWIMTELIRNPECMKKLQNEIRSTIRPHGSYIKEKEVENMRYLKAVIKEVFRVHPPLPLILPRLLTEDVKVKGYDIAAGTEVLINAWSIHRDPAIW-GPDAEEFKPERHLDSTLDYHGQDLKYIPFGSGRRIC 439          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.747e-22
Identity = 61/196 (31.12%), Postives = 102/196 (52.04%), Query Frame = -1
Query:  202 IDHILDAQTKGEITEDNVLY--IVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGND---FRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFE 774
            ++H++  Q +      +V+   ++ ++ +A  ET+  ++EW +A ++ +PE+ +K  +E+D  IG+   I E D   LPYLQ V+ ET RL    P L+P     D K+GGYDVP ++ ++VNAW I  +P  W++                +  G+D   ++ +PFG GRR+C              G L+Q FE
Sbjct:  271 VNHLISLQQQQPEYYTDVIIKGLMMSMMLAGTETSAVTLEWAMANLLRNPEVLEKARSEIDEKIGKDRLIDESDIAVLPYLQNVVSETFRLFPVAPFLIPRSPTDDMKIGGYDVPRDTIVMVNAWAIHRDPEIWEEPEKFNPDRYN------DGCGSDYYVYKLMPFGNGRRTCPGAGLGQRIVTLALGSLIQCFE 460          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C79B3_ARATH (Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP79B3 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.747e-22
Identity = 52/179 (29.05%), Postives = 88/179 (49.16%), Query Frame = -1
Query:  202 ITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFE 738
            +T D +   ++ + +AA +    ++EW IAE++N PEI  K   E+D V+G+   + E D  KL Y++A+I+E  RL       +PH+ L D  + GY +P  S+++++ + +  NP  W               S+V    ND R++ F  G+R C               RL+Q F+
Sbjct:  323 LTADEIKPTIKELVMAAPDNPSNAVEWAIAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFK 501          
The following BLAST results are available for this feature:
BLAST of CF832404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 313
Match NameE-valueIdentityDescription
C84A1_ARATH1.682e-2230.77Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C80B2_ESCCA1.682e-2234.32(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C79B2_ARATH1.682e-2228.88Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana... [more]
C75A7_EUSGR1.682e-2233.77Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C75A6_CAMME1.682e-2230.68Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71BN_ARATH1.682e-2234.59Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71AQ_ARATH2.869e-2230.56Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH2.869e-2232.08Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C81F1_ARATH3.747e-2231.12Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C79B3_ARATH3.747e-2229.05Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832404 ID=CF832404; Name=CF832404; organism=Citrus sinensis; type=EST; length=831bp
CCACTGCCACTTGATTTGATCCGACATTGAAGAAACCATTCAACCACTTT
GAAACAGACTTAACATTACAACCAAATGGAATTGTGAAACTAGAATGATC
TAGGCTTGGCAACAATGGTCGAGTGCTTCAAAATGTGCAAACTGAACTGC
CCACCTTTCTCTGCAATGTCAATCTTACATTGACCATGAAGGAGGCAAGA
GCTCAAAGTTCTGTACCAAACGCCCAATAATGATACCAAGAATTGGCAAA
GCAAGGATAATTCCAGGGCAGCTTCTTCTCCCAACACCGAAAGGAAGGTA
ACGGAAATCATTTCCATTAGCCTCAACCTTGGACTCCTCCTCCAAAAACC
TCTCAGGCCTGAATTCTTCAGGTTTCTTCCATTGGGCGGGATTGTTGGCG
ATCCACCACGCGTTCACTATGATTTTGCTCTCAGCAGGGACGTCATATCC
TCCAAGCTTGGCGTCCTGAAGGTTCATGTGCGGCACAAGAATAGGAATTG
CCATCCTAAGGCGAATAGTTTCCTTGATCACGGCCTGAAGGTAGGGTAGT
TTGTGGGTGTCAAGCTCAGTGATTTGATGACCACGACCAATCACGGAGTC
AAGTTCATTGCAGAGCTTCTTCTGGATTTCAGGATGATTCACTATCTCTG
CAATTCCCCACTCTATCGACCAAAGAGTTGTCTCTATCGCGGCAACATTG
ATGTTCTCAACGATGTATAGAACGTTGTCCTCGGTGATTTCTCCCTTTGT
CTGAGCGTCCAAAATATGATCGATTGCGCATTTCAAGCTTTAATTACTCA
TGCTCTTCGAGCATGCGCATGTCTTTCTCTC
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