CF832404

Overview
NameCF832404
Unique NameCF832404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.424e-21
Identity = 52/159 (32.70%), Postives = 90/159 (56.60%), Query Frame = -1
Query:  268 GEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 744
            G++T ++V  I+ N+ + AI T+  ++ W +AE++ +P + KK+ +E+ + +     IT  D   LPYL+ VIKET RL   +P+L+P   + + ++ GY +  ++ + VN W I  +P  WK             ++ ++A G +F  LPFG GRR C
Sbjct:  284 GKLTRNHVKAILMNVLLGAINTSAMTMTWAMAELIRNPRVMKKVQSEIRNQMINKSVITLDDIDHLPYLKMVIKETWRLHPPVPLLLPREVMSEFEINGYKIQPKTLLYVNVWAIGRDPDSWK--DADMFYPERFMDNNIDAKGQNFELLPFGSGRRIC 440          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 51/159 (32.08%), Postives = 88/159 (55.35%), Query Frame = -1
Query:  268 GEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 744
            G++T +++  ++ N+ +  I T+  ++ W + E++ +P + KK+ +E+ + IG    I   D  +L YL+ VI ET RL    P+LVP   + + ++ GY +PA++++ VN W I  +P  WK              S ++A G +F  LPFG GRR C
Sbjct:  284 GKLTRNHIKAVLMNVLLGGIGTSAITMTWAMTELMRNPRVMKKVQSEIRNQIGGKSMICLDDIDQLHYLKMVINETWRLHPPAPLLVPREVMSEFEINGYTIPAKTRLYVNVWGIGRDPDTWK--DPEEFLPERFVNSNIDAKGQNFELLPFGSGRRMC 440          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 59/179 (32.96%), Postives = 91/179 (50.84%), Query Frame = -1
Query:  268 KCAIDHILDAQTKG------EITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNEL-DSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 783
            K  +D +LD   K        +T D++   + NI +A I+T   ++ W + E+  +PE+ K +  E+ DS      +IT+ D +K+P+L  VIKET RL    P+L+P   +   K+ GYD+P + +I+VN W I  +P  W               + V+  G  F  LPFG GRR C
Sbjct:  268 KDIVDVMLDVMHKQGKDDSLRLTIDHIKGFLTNIIIAGIDTGALTMIWAMTELARNPELMKNVQGEIRDSFGNNKERITKEDLNKVPFLNMVIKETFRLHPVAPLLLPRETMTHIKVQGYDIPPKRRILVNTWAIGRDPTLW--INPEEFNPERFINNPVDYRGQHFELLPFGSGRRIC 444          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 58/191 (30.37%), Postives = 95/191 (49.74%), Query Frame = -1
Query:  172 EITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIG-RGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPSWSM*D 741
            ++  DN+  IV ++ +A I+T+  ++ W + E++ +P + KK    + + +G +  +ITE D  K+ YL  ++KET RL  A+P +VP   +   K+ GYD+P +++I +N W I  +P +W               S V+  G  F  LPFG GRR C                L+  F+     WSM D
Sbjct:  288 KLNMDNLKAIVMDVFLAGIDTSAVTMIWAMTELIRNPRVMKKAQESIRTTLGLKKERITEEDLGKVEYLNHILKETFRLHPALPFVVPRETMSHIKIQGYDIPPKTQIQLNVWTIGRDPKRWN--DPEEFNPERFANSSVDFRGQHFDLLPFGSGRRICPGMPMAIASVELALMNLLYYFD-----WSMPD 471          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 51/149 (34.23%), Postives = 84/149 (56.38%), Query Frame = -1
Query:  268 IVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 714
            IV ++ VA  +++   ++W + E++ HPE  + L  E+ ++      ++E D   + YL+AVIKET RL   +P+L PH ++QD  LG Y +PA +++++NAW I    A W              +S V+  G++F  +PFG GRR C
Sbjct:  285 IVLDVLVAGTDSSYALMDWAMTELLRHPECLRTLQEEVRTICKGNLSVSEEDIQNMSYLKAVIKETTRLHPPLPLLAPHESIQDVILGDYHIPAGTQVMINAWAIGREAATW-GPDAEKFRPERHLDSSVDFRGHNFELVPFGAGRRIC 432          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP17A_SQUAC (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalus acanthias GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.429e-21
Identity = 54/186 (29.03%), Postives = 96/186 (51.61%), Query Frame = -1
Query:  184 ITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFEL-LPPSW 738
            +T+D+++  V +I  A +ET+  +  W I  +++HPE+QKK+  E+DS IG        D   + +L A I E +R++   P+L+PH+ L D+ +G Y +P  +++I+N W I ++  +WK             + K   + ++  YLPFG G R C                ++Q F + +PP +
Sbjct:  290 LTDDHMVMTVADIFGAGVETSSTAFAWMIIYLIHHPEVQKKIQEEIDSNIGFERTPKMSDKGNMNFLNATIHEILRIQPVSPLLIPHVALADSSIGDYTIPKGTRVIINLWAIHHDEKEWKNPDAFDPGRFLDEDGKYVCSSSE-SYLPFGAGTRVCLGEMLARMELFLFTSWILQRFTVQVPPGY 474          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.172e-21
Identity = 51/133 (38.35%), Postives = 76/133 (57.14%), Query Frame = -1
Query:  268 IEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 666
            IEW +A+++ +P+   KL  ELD V+GR   + E    +LPYLQA +KET+RL   I I++PH  ++  ++ GY +P    + VNA  I  +P  WK             +S +E NG  F+++PFG GRR C
Sbjct:  299 IEWALAQLIKNPDKLAKLREELDRVVGRSSTVKESHFSELPYLQACVKETMRLYPPISIMIPHRCMETCQVMGYTIPKGMDVHVNAHAIGRDPKDWK--DPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRIC 429          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.172e-21
Identity = 53/158 (33.54%), Postives = 88/158 (55.70%), Query Frame = -1
Query:  268 EITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 741
            E+T ++   I+ NI  A I+T+  ++ W +  ++ +P + KKL  E+   I    +IT+ D  +L Y + V+KET R+   +P+LVP +  +D K+ GYDVP ++ I VN W +  +P+ WK             +++ +  G +F  LPFG GRR C
Sbjct:  281 ELTREHTKGILMNILTAGIDTSAQTMTWAMTHLLANPRVMKKLQAEIREKIKNIDEITDDDVEQLDYFKLVLKETFRISPIVPVLVPRVAAKDLKIAGYDVPEKTWIHVNMWAVHMSPSIWK--DPETFNPERFIDNQTDFKGLNFELLPFGSGRRMC 436          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: CP17A_ONCMY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oncorhynchus mykiss GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.142e-21
Identity = 54/160 (33.75%), Postives = 87/160 (54.37%), Query Frame = -1
Query:  268 ITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANG---NDFRYLPFGVGRRSC 738
            ++ED++L  V +I  A +ETT   ++W IA +++HP++Q+++  ELDSV+G        D   LPYL+A I+E +R+R   P+L+PH+   D  +G + V   ++II+N W + ++  +WK                 E  G       YLPFG G R C
Sbjct:  294 LSEDHLLMTVGDIFGAGVETTSTVLKWAIAYLIHHPQVQQRIQEELDSVVGGDRTPQLSDRGSLPYLEATIREVLRIRPVAPLLIPHVAQTDTSIGKFTVRKGARIIINLWSLHHDEKEWKNPEMFDPGRFL----NEEGTGLCIPSPSYLPFGAGVRVC 449          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.142e-21
Identity = 56/171 (32.75%), Postives = 95/171 (55.56%), Query Frame = -1
Query:  268 IDHILDA--QTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 774
            +D +LD   Q + E+T +++ +++ ++ VA  +T   ++EW + E+    E   K  +E+  VIG+   + E D   LPYLQA++KET+RL  A P L+P  +  D ++ G+ VP  ++++VN W I  + + W+             E+ V+  G DF  +PFG GRR C
Sbjct:  284 LDSLLDLTQQNEAELTMNDLKHLLLDVFVAGTDTNSSTMEWAMTELFRSTEKMVKAQSEIRQVIGQNGFVQESDIPSLPYLQAIVKETLRLHPAAP-LIPRKSESDVQIMGFLVPKNTQVVVNVWAIGRDASVWENPMKFEPERFLLRETDVK--GRDFELIPFGSGRRMC 451          
The following BLAST results are available for this feature:
BLAST of CF832404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 313
Match NameE-valueIdentityDescription
C71B9_ARATH1.424e-2132.70Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71BY_ARATH1.859e-2132.08Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71BG_ARATH1.859e-2132.96Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH1.859e-2130.37Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71AL_ARATH1.859e-2134.23Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
CP17A_SQUAC2.429e-2129.03Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalu... [more]
C80A1_BERST3.172e-2138.35Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71B1_THLAR3.172e-2133.54Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
CP17A_ONCMY4.142e-2133.75Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oncorh... [more]
C76C3_ARATH4.142e-2132.75Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832404 ID=CF832404; Name=CF832404; organism=Citrus sinensis; type=EST; length=831bp
CCACTGCCACTTGATTTGATCCGACATTGAAGAAACCATTCAACCACTTT
GAAACAGACTTAACATTACAACCAAATGGAATTGTGAAACTAGAATGATC
TAGGCTTGGCAACAATGGTCGAGTGCTTCAAAATGTGCAAACTGAACTGC
CCACCTTTCTCTGCAATGTCAATCTTACATTGACCATGAAGGAGGCAAGA
GCTCAAAGTTCTGTACCAAACGCCCAATAATGATACCAAGAATTGGCAAA
GCAAGGATAATTCCAGGGCAGCTTCTTCTCCCAACACCGAAAGGAAGGTA
ACGGAAATCATTTCCATTAGCCTCAACCTTGGACTCCTCCTCCAAAAACC
TCTCAGGCCTGAATTCTTCAGGTTTCTTCCATTGGGCGGGATTGTTGGCG
ATCCACCACGCGTTCACTATGATTTTGCTCTCAGCAGGGACGTCATATCC
TCCAAGCTTGGCGTCCTGAAGGTTCATGTGCGGCACAAGAATAGGAATTG
CCATCCTAAGGCGAATAGTTTCCTTGATCACGGCCTGAAGGTAGGGTAGT
TTGTGGGTGTCAAGCTCAGTGATTTGATGACCACGACCAATCACGGAGTC
AAGTTCATTGCAGAGCTTCTTCTGGATTTCAGGATGATTCACTATCTCTG
CAATTCCCCACTCTATCGACCAAAGAGTTGTCTCTATCGCGGCAACATTG
ATGTTCTCAACGATGTATAGAACGTTGTCCTCGGTGATTTCTCCCTTTGT
CTGAGCGTCCAAAATATGATCGATTGCGCATTTCAAGCTTTAATTACTCA
TGCTCTTCGAGCATGCGCATGTCTTTCTCTC
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