CF832405

Overview
NameCF832405
Unique NameCF832405
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length552
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 261.151 bits (666), Expect = 2.455e-69
Identity = 125/161 (77.64%), Postives = 143/161 (88.82%), Query Frame = 3
Query:   69 ITVSKLRGKRYKLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWEDEAARVGEDVRKDPEAATNGIVWRRRLLLM 551
            IT+SKLRGK +KLPPGP PVPVF NWLQVGDDLNHRNL+DLAK++ ++LLL M QRNL V+SSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQ++VFTVYGEHWR MRRIM+VP FTNKVVQQ+RF WE EAA V +DV+K+ +A+ NGIV RRRL LM
Sbjct:   21 ITISKLRGKPFKLPPGPFPVPVFGNWLQVGDDLNHRNLTDLAKRFAEILLLRMEQRNLVVISSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDIVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVKKNSKASVNGIVIRRRLQLM 181          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 6.047e-68
Identity = 124/159 (77.99%), Postives = 139/159 (87.42%), Query Frame = 3
Query:   75 VSKLRGKRYKLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWEDEAARVGEDVRKDPEAATNGIVWRRRLLLM 551
            +SKLRGK+ KLPPGP+P+P+F NWLQVGDDLNHRNL D AKK+GD+ LL MGQRNL VVSSPD  KEVL TQGVEFGSRTRNVVFDIFTGKGQ+MVFTVYGEHWR MRRIM+VP FTNKVVQQ+R  WE EAA V EDV+K+P++AT GIV R+RL LM
Sbjct:   23 ISKLRGKKLKLPPGPIPIPIFGNWLQVGDDLNHRNLVDYAKKFGDLFLLRMGQRNLVVVSSPDLTKEVLLTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQNREGWEFEAASVVEDVKKNPDSATKGIVLRKRLQLM 181          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 2.298e-67
Identity = 126/161 (78.26%), Postives = 142/161 (88.20%), Query Frame = 3
Query:   69 ITVSKLRGKRYKLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWEDEAARVGEDVRKDPEAATNGIVWRRRLLLM 551
            IT+SKLRGKR+KLPPGP+PVPVF NWLQVGDDLNHRNL+DLAK++GD+ LL MGQRNL VVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQ+MVFTVYG     MRRIM+VP FTNKVVQQ+RF WE EA  V +DV+K+PEA ++GIV RRRL LM
Sbjct:   21 ITISKLRGKRFKLPPGPIPVPVFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGT-LAEMRRIMTVPFFTNKVVQQYRFGWEFEAQSVVDDVKKNPEACSSGIVLRRRLQLM 180          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 5.119e-67
Identity = 120/161 (74.53%), Postives = 139/161 (86.34%), Query Frame = 3
Query:   69 ITVSKLRGKRYKLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWEDEAARVGEDVRKDPEAATNGIVWRRRLLLM 551
            +T+SKLRGKR+KLPPGP+PVP+F  WLQVGDDLNHRNL+D AK++G++ LL MGQRNL VVSSP+ AKEVLHTQ VEFGSRTRNVVFDIFTGKGQ+MVFTVYGEHWR MRRIM+VP FTNKVVQQ+R+ WE EA  V  DV+ + EA+  GIV R+RL LM
Sbjct:   21 VTISKLRGKRFKLPPGPIPVPIFGYWLQVGDDLNHRNLTDYAKRFGEIFLLRMGQRNLVVVSSPELAKEVLHTQCVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWESEAESVVNDVKNNAEASVGGIVIRKRLQLM 181          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 5.191e-19
Identity = 51/136 (37.50%), Postives = 80/136 (58.82%), Query Frame = 3
Query:   87 RGKRYKLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWEDEAARVGEDVR 494
            RGK+   PP P  +P+  N  Q+G    HR+L  L+ +YG ++LLH G   + VVSS D AK+VL T    F SR R+ +FD     G+++    YGE+WR M+ +  + +F+NK+V+  R   ++E + + E +R
Sbjct:   27 RGKKSNAPPSPPRLPLIRNLHQLGRH-PHRSLCSLSHRYGPLMLLHFGSVPVLVVSSADAAKDVLKTHDRVFASRPRSKIFDKIFYNGRDVALAPYGEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEISLMIEKIR 161          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.779e-19
Identity = 57/157 (36.31%), Postives = 90/157 (57.32%), Query Frame = 3
Query:   69 ITVSKLRGKRYKLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWEDEAARVGEDVRKDP-EAATNGIVWRR 536
            I + KL   + KLPPGP  +P+  N  Q G  L H++L  ++++YG V+LLH G   + +VSS + A+EVL T  +E  SR + V   +FT   +++ F  YGE+WR MR+I    +F+ K ++  R+  EDE+  +   V K   E  T+ +  R+
Sbjct:   16 IFLKKLLPSKGKLPPGPKGLPIIGNLHQFGRFL-HKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSRPKTVGSGLFTYNFKDIGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETPTSSVNLRK 171          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.739e-18
Identity = 46/131 (35.11%), Postives = 75/131 (57.25%), Query Frame = 3
Query:  102 KLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWEDEAARVGEDVR 494
            KLPPGP  +P       +   L HR L DLA+KYG ++ L +G+ +  VV+SP+ AK+VL T  + F SR + +  DI     +++ F+ YG++WR MR+I  + + + K V+       DE  R+ + ++
Sbjct:   30 KLPPGPWKLPFIGGMHHLAGGLPHRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSIQ 160          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 9.789e-18
Identity = 55/157 (35.03%), Postives = 79/157 (50.32%), Query Frame = 3
Query:  102 KLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQ-------------HRFNWEDEAARVGEDVRKDPEAATNGIVWR 533
            +LPPGP P P+  N+ QV   L HR L +LA+KYG +L L  G     VVSS + AK  L T  + F SR    V   F    +++ F+ YG+HWR MR+I  + + T+K ++              H    E E+ R+  +V K    +   I+WR
Sbjct:   41 RLPPGPYPWPIIGNFHQVRLPL-HRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSKAISTSLANILWR 196          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 9.789e-18
Identity = 48/146 (32.88%), Postives = 82/146 (56.16%), Query Frame = 3
Query:   81 KLRGKRYKLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWEDEAARVGEDVRKDPEAATN 518
            +L GK+ K PP P  +P+  N  Q+G    HR+L DL+++YG ++LLH+G+  + +VSS D A+E+L T    F +R R+ +        +++    YGE+WR M+ +  + + +NK+V+  R   E+E   +   +RK      N
Sbjct:   22 QLSGKKGKTPPSPPGLPLIGNLHQLGRH-THRSLCDLSRRYGPLMLLHLGRVPVLIVSSADMAQEILKTHDQAFANRPRSKLSQKLLYNNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEITLMMAKIRKSSSLPFN 166          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.670e-17
Identity = 48/131 (36.64%), Postives = 73/131 (55.73%), Query Frame = 3
Query:  102 KLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWEDEAARVGEDVR 494
            KLPPGP  +P   +   +     HR L DLAKKYG ++ L +G+ +  VV+SPD AKEVL T  + F SR + +  DI      ++ F+ YGE+W+ MR+I    + + K V+       DE  R+ + ++
Sbjct:   30 KLPPGPWKLPFIGSMHHLAGGRPHRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQ 160          
The following BLAST results are available for this feature:
BLAST of CF832405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
TCMO_PEA2.455e-6977.64Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_ARATH6.047e-6877.99Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
TCMO_CICAR2.298e-6778.26Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_MEDSA5.119e-6774.53Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
C71AO_ARATH5.191e-1937.50Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71B5_ARATH6.779e-1936.31Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71D7_SOLCH5.739e-1835.11Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C75A1_PINTA9.789e-1835.03Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71AP_ARATH9.789e-1832.88Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71D6_SOLCH1.670e-1736.64Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832405 ID=CF832405; Name=CF832405; organism=Citrus sinensis; type=EST; length=552bp
AGGTAAAGATGGATCTCCTCTTGCTGGAAAAGACGCTTTTAGCCCTCTTC
GCCGCAGTTGTTGTCGCCATTACCGTCTCTAAACTCCGCGGAAAGCGCTA
CAAGCTCCCCCCCGGACCCCTCCCCGTCCCCGTATTCTGTAACTGGCTCC
AGGTCGGCGATGACTTGAACCATCGGAACCTCTCCGACTTAGCCAAGAAA
TATGGAGATGTCCTCCTCCTCCACATGGGCCAGCGCAACCTCGACGTCGT
CTCGTCTCCGGATCACGCCAAGGAGGTTCTGCACACGCAGGGAGTGGAGT
TCGGATCACGAACGAGGAACGTCGTGTTCGATATCTTCACTGGGAAGGGC
CAGGAAATGGTGTTCACAGTGTACGGCGAGCACTGGCGGAATATGCGGAG
GATCATGAGCGTCCCTATCTTCACAAACAAAGTGGTTCAGCAGCATCGGT
TTAATTGGGAAGACGAGGCCGCTAGAGTCGGTGAGGATGTTAGGAAGGAC
CCCGAAGCGGCGACCAATGGGATCGTCTGGAGGAGGCGGCTGCTGCTTAT
GA
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