CF832405

Overview
NameCF832405
Unique NameCF832405
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length552
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.759e-12
Identity = 39/121 (32.23%), Postives = 63/121 (52.07%), Query Frame = 3
Query:  102 KLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWED 464
            +LPPGP   P+    L +  ++ H   +++AKKYG V+ L +G   L + S+PD AK  L T  + F +R  N          Q+MVF  YG  W+ +R++ ++ +   K ++    NW D
Sbjct:   40 RLPPGPTGWPIL-GALPLLGNMPHVTFANMAKKYGSVMYLKVGSHGLAIASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYNAQDMVFAHYGPKWKLLRKLSNLHMLGGKALE----NWAD 155          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.759e-12
Identity = 49/133 (36.84%), Postives = 71/133 (53.38%), Query Frame = 3
Query:   69 ITVSKLRGKRYKLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWEDE 467
            I + KL+  ++KLPPGP  +P   N  Q+  +L  RNL+    KYG V+LL  G   L V+SS + A+EVL    +E  SR         +   +++ F  YGE W+ MR++  V +FT K  Q  R   E+E
Sbjct:   16 IFLKKLKHSKWKLPPGPPKLPFIGNLHQL-QELPPRNLNH---KYGPVILLRFGFVPLVVISSKEAAEEVLKIHDLECCSRPETAGTRKISYNFKDIGFAPYGEEWKAMRKLSVVELFTAKKHQYFRSIREEE 144          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.759e-12
Identity = 49/150 (32.67%), Postives = 82/150 (54.67%), Query Frame = 3
Query:   69 ITVSKLRGKRYKLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWEDEAARVGEDVRKDPEAATN 518
            I  SK + K+  LPPGP  +P+  N  Q+G+   HR + +L+K YG ++ L +G     V +S +  ++VL T  +E  SR         T   +++VF+ Y ++WR +R++  V ++T K VQ  R   E+E A     VR + +AA++
Sbjct:   18 IAKSKRKPKK-NLPPGPPRLPIIGNLHQLGEK-PHRAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASF---VRFNKQAASS 162          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.603e-12
Identity = 43/130 (33.08%), Postives = 72/130 (55.38%), Query Frame = 3
Query:  102 KLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWEDEAARVGEDV 491
            +LPPGP  +P+  N   +G  L H+NL +LA++YG V+ L +G     VVSS + A+EVL    V+  SR  +      +   + + F  YGE+WR MR++ ++ + + + V+   +  E E  R+  D+
Sbjct:   54 RLPPGPAQLPILGNLHLLGP-LPHKNLRELARRYGPVMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRPASPGPKRLSYDLKNVGFAPYGEYWREMRKLFALELLSMRRVKAACYAREQEMDRLVADL 182          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: CP241_CANFA (Cytochrome P450 2C41 OS=Canis familiaris GN=CYP2C41 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.706e-12
Identity = 42/111 (37.84%), Postives = 64/111 (57.66%), Query Frame = 3
Query:   69 ITVSKLRGKRYKLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRR 401
            +++ K   ++ KLPPGP P+P   N LQ+  D+N ++LS+L+K YG V  L+ G +   V+   D  KE L   G EF +R R  + +  +G G  ++FT  G  W+ MRR
Sbjct:   17 LSLWKQSSRKGKLPPGPTPLPFIGNILQLDKDIN-KSLSNLSKAYGPVFTLYFGMKPTVVLHGYDAVKETLIDLGEEFSARGRFPIAEKVSG-GHGIIFT-SGNRWKEMRR 124          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.706e-12
Identity = 43/133 (32.33%), Postives = 70/133 (52.63%), Query Frame = 3
Query:   69 ITVSKLRGKRYKLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWEDE 467
            I   K +  + KLPPGP  +P+  N L   + L H+ L +L K +G V+ L +G   L V+SS   A+EVL T  ++  SR   +     +   +++ F  YGE WR +R++  + +F+ K     R+  E+E
Sbjct:   19 IFTRKSQSSKLKLPPGPPKLPIIGN-LHYLNGLPHKCLLNLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEE 150          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.146e-12
Identity = 40/133 (30.08%), Postives = 70/133 (52.63%), Query Frame = 3
Query:   99 YKLPPGPLPVPVFCNW--LQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWEDEAARVGEDV 491
            +KLPPGP  +P+  N   L +   L  + L  L +KYG ++ L +G+ +  VVSSP  A E++ T  V F  R + +          ++ F  YG++WR +R+I ++ + + K VQ      +DE  ++ + +
Sbjct:   31 HKLPPGPWRLPIIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSI 163          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: CP2AD_HUMAN (Cytochrome P450 2A13 OS=Homo sapiens GN=CYP2A13 PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.048e-11
Identity = 40/112 (35.71%), Postives = 60/112 (53.57%), Query Frame = 3
Query:   69 ITVSKLRGKRYKLPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFD-IFTGKGQEMVFTVYGEHWRNMRR 401
            ++V + R  R KLPPGP P+P   N+LQ+  +  + +L  ++++YG V  +H+G R + V+   D  KE L  Q  EF  R     FD +F G G   V    GE  + +RR
Sbjct:   21 MSVWRQRKSRGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEEFSGRGEQATFDWLFKGYG---VAFSNGERAKQLRR 129          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.048e-11
Identity = 43/134 (32.09%), Postives = 68/134 (50.75%), Query Frame = 3
Query:  105 LPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKG---QEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWEDEAARVGEDVRK 497
            LPPGP P P+  N LQ+G+   H   ++LA+ YGD+  L MG   + V S+   A E+L T      +R    VF  F  KG     +V++   E W+N+R++    +FT K+++      E +   + E + K
Sbjct:   29 LPPGPKPWPIVGNLLQLGEK-PHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSAR---YVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMK 158          
BLAST of CF832405 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.048e-11
Identity = 43/134 (32.09%), Postives = 68/134 (50.75%), Query Frame = 3
Query:  105 LPPGPLPVPVFCNWLQVGDDLNHRNLSDLAKKYGDVLLLHMGQRNLDVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKG---QEMVFTVYGEHWRNMRRIMSVPIFTNKVVQQHRFNWEDEAARVGEDVRK 497
            LPPGP P P+  N LQ+G+   H   ++LA+ YGD+  L MG   + V S+   A E+L T      +R    VF  F  KG     +V++   E W+N+R++    +FT K+++      E +   + E + K
Sbjct:   28 LPPGPKPWPIVGNLLQLGEK-PHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSAR---YVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMK 157          
The following BLAST results are available for this feature:
BLAST of CF832405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
C75A4_GENTR2.759e-1232.23Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71BT_ARATH2.759e-1236.84Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR2.759e-1232.67Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71E1_SORBI3.603e-1233.084-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
CP241_CANFA4.706e-1237.84Cytochrome P450 2C41 OS=Canis familiaris GN=CYP2C4... [more]
C71BN_ARATH4.706e-1232.33Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71D8_SOYBN6.146e-1230.08Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
CP2AD_HUMAN1.048e-1135.71Cytochrome P450 2A13 OS=Homo sapiens GN=CYP2A13 PE... [more]
C80B2_ESCCA1.048e-1132.09(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C80B1_ESCCA1.048e-1132.09(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832405 ID=CF832405; Name=CF832405; organism=Citrus sinensis; type=EST; length=552bp
AGGTAAAGATGGATCTCCTCTTGCTGGAAAAGACGCTTTTAGCCCTCTTC
GCCGCAGTTGTTGTCGCCATTACCGTCTCTAAACTCCGCGGAAAGCGCTA
CAAGCTCCCCCCCGGACCCCTCCCCGTCCCCGTATTCTGTAACTGGCTCC
AGGTCGGCGATGACTTGAACCATCGGAACCTCTCCGACTTAGCCAAGAAA
TATGGAGATGTCCTCCTCCTCCACATGGGCCAGCGCAACCTCGACGTCGT
CTCGTCTCCGGATCACGCCAAGGAGGTTCTGCACACGCAGGGAGTGGAGT
TCGGATCACGAACGAGGAACGTCGTGTTCGATATCTTCACTGGGAAGGGC
CAGGAAATGGTGTTCACAGTGTACGGCGAGCACTGGCGGAATATGCGGAG
GATCATGAGCGTCCCTATCTTCACAAACAAAGTGGTTCAGCAGCATCGGT
TTAATTGGGAAGACGAGGCCGCTAGAGTCGGTGAGGATGTTAGGAAGGAC
CCCGAAGCGGCGACCAATGGGATCGTCTGGAGGAGGCGGCTGCTGCTTAT
GA
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