CF832415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832415 vs. ExPASy Swiss-Prot
Match: ARNA_PSEF5 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=arnA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.759e-33 Identity = 80/206 (38.83%), Postives = 115/206 (55.83%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGHEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYA--KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 ED S I G I KQRW Y+ +KQL++R+I+A GA+ G FT+ RPFNW+GPR+D +D G R + NL+ P++L DGG+ +R F I D IEA+ +++N NG I N+GNP NE ++RQL E + + + G DV SK FYG GY D + R P + + L W P + + + +TL + Sbjct: 449 EDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIVDNENDCCNGQIINIGNPDNEASIRQLGEELLRQFEAHPLRGNFPPFAGFRDVESKAFYGAGYQDVEHRKPSIDNAKRLLNWEPTVEMSETIGNTLDF 650
BLAST of CF832415 vs. ExPASy Swiss-Prot
Match: ARNA_PSE14 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=arnA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.759e-33 Identity = 80/206 (38.83%), Postives = 115/206 (55.83%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGHEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYA--KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 ED S I G I KQRW Y+ +KQL++R+I+A G + G +FT+ RPFNW+GPR+D +D G R + +L+ P++LVDGG +R F + D IEA+ +IEN NG I N+GNP NE ++RQL E + + + G +V S+ FYG+GY D R P + Q +GW P L + + TL + Sbjct: 449 EDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVADGIEALARIIENRDGCCNGQIINIGNPDNEASIRQLGEELLRQFEAHPLRGNFPPFAGFREVESQSFYGKGYQDVSHRKPSIDNARQLIGWTPGIELSETIGKTLDF 650
BLAST of CF832415 vs. ExPASy Swiss-Prot
Match: ARNA_SHIFL (Bifunctional polymyxin resistance protein arnA OS=Shigella flexneri GN=arnA PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 2.297e-33 Identity = 78/217 (35.94%), Postives = 121/217 (55.76%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGHEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK---------VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 667 ED S I G + K RW Y+ +KQL++R+I+A G + G +FT+ PFNW+GPR+D ++ G R + NL+ P+KL+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K +G +E S +YG+GY D + R P + ++ L W PK + + ++ TL + RT Sbjct: 446 EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFLPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYHIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVE-------SSCYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 652
BLAST of CF832415 vs. ExPASy Swiss-Prot
Match: ARNA_ESCF3 (Bifunctional polymyxin resistance protein arnA OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=arnA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.297e-33 Identity = 78/211 (36.97%), Postives = 118/211 (55.92%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGHEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 667 ED S I G I K RW Y+ +KQL++R+I+A G + G +FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L +M+ + K P V S +YG+GY D + R P + + L W P + + ++ TL + RT Sbjct: 446 EDHSNLIVGPINKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENTGNRCDGEIINIGNPDNEASIEELGKMLLASFDKHPLRQHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPTIDMQETIDETLDFFLRT 652
BLAST of CF832415 vs. ExPASy Swiss-Prot
Match: ARNA_SALTI (Bifunctional polymyxin resistance protein arnA OS=Salmonella typhi GN=arnA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.000e-33 Identity = 77/207 (37.20%), Postives = 117/207 (56.52%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGHEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 ED S I G + K RW Y+ +KQL++R+I+A G + G FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K P V S+ +YG+GY D R P + + L W P ++ D +E TL + Sbjct: 446 EDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETLDF 648
BLAST of CF832415 vs. ExPASy Swiss-Prot
Match: ARNA_SALSV (Bifunctional polymyxin resistance protein arnA OS=Salmonella schwarzengrund (strain CVM19633) GN=arnA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.000e-33 Identity = 77/207 (37.20%), Postives = 117/207 (56.52%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGHEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 ED S I G + K RW Y+ +KQL++R+I+A G + G FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K P V S+ +YG+GY D R P + + L W P ++ D +E TL + Sbjct: 446 EDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETLDF 648
BLAST of CF832415 vs. ExPASy Swiss-Prot
Match: ARNA_SALPK (Bifunctional polymyxin resistance protein arnA OS=Salmonella paratyphi A (strain AKU_12601) GN=arnA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.000e-33 Identity = 77/207 (37.20%), Postives = 117/207 (56.52%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGHEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 ED S I G + K RW Y+ +KQL++R+I+A G + G FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K P V S+ +YG+GY D R P + + L W P ++ D +E TL + Sbjct: 446 EDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETLDF 648
BLAST of CF832415 vs. ExPASy Swiss-Prot
Match: ARNA_SALPA (Bifunctional polymyxin resistance protein arnA OS=Salmonella paratyphi A GN=arnA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.000e-33 Identity = 77/207 (37.20%), Postives = 117/207 (56.52%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGHEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 ED S I G + K RW Y+ +KQL++R+I+A G + G FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K P V S+ +YG+GY D R P + + L W P ++ D +E TL + Sbjct: 446 EDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETLDF 648
BLAST of CF832415 vs. ExPASy Swiss-Prot
Match: ARNA_PSEPF (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas fluorescens (strain Pf0-1) GN=arnA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.140e-32 Identity = 79/206 (38.35%), Postives = 114/206 (55.34%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGHEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYA--KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 ED S I G I KQRW Y+ +KQL++R+I+A GA+ G FT+ RPFNW+GPR+D +D G R + NL+ P++L DGG+ +R F I D +EA+ +I+N NG I N+GNP NE ++RQL E + + + DV SK FYG GY D + R P + + L W P + + + +TL + Sbjct: 449 EDRSNLIVGPINKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDVCNGQIINIGNPDNEASIRQLGEELLRQFEAHPLRSNFPPFAGFRDVESKAFYGAGYQDVEHRKPSIANAKRLLDWTPTVEMRETIGNTLDF 650
BLAST of CF832415 vs. ExPASy Swiss-Prot
Match: ARNA_AERS4 (Bifunctional polymyxin resistance protein arnA OS=Aeromonas salmonicida (strain A449) GN=arnA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.140e-32 Identity = 78/206 (37.86%), Postives = 114/206 (55.34%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGHEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA--KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 ED S I G I KQRW Y+ +KQL++R+I+A G + G FT+ RPFNW+GPR+D +D G R + NL+ P++LVDGG +R F I+D IEA+ +IEN R +G I N+G+P NE ++ Q+AE++ + + V SK FYG+GY D R P + + L W P + + + TL + Sbjct: 448 EDESRLIVGPIHKQRWIYSVSKQLLDRVIWAYGKKEGLNFTLFRPFNWMGPRLD---SLDSARIGSSRAITQLILNLVDGTPIQLVDGGAQKRCFTDIEDGIEALFRIIENKGNRCDGQIINIGSPDNEASILQMAEVLLGKFEAHPLRHHFPPFAGFKRVESKSFYGDGYQDVSHRRPSIKNARRLLDWEPTIEMEETIGKTLDF 650 The following BLAST results are available for this feature:
BLAST of CF832415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832415 ID=CF832415; Name=CF832415; organism=Citrus sinensis; type=EST; length=747bpback to top |