CF832441

Overview
NameCF832441
Unique NameCF832441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 147.132 bits (370), Expect = 1.153e-34
Identity = 80/222 (36.04%), Postives = 117/222 (52.70%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD-KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM---GRNVCGVDSMVS 692
            R  GAV  +K QG CG CW+FSA   +EG + + TG L+SLSEQ+L+DC    +         GCNGG +   F++I+  GG+  E++YPYT  D G C  D +++    +  +  +  + +      V + P++V ++A     + Y  G+     CG  +DH V IVGYG+ G          YWI+KNSW   WGE GY +I     G   CG+ +M S
Sbjct:  134 RSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR-------GCNGGYITDGFQFIINNGGINTEENYPYTAQD-GECNVDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTG-PCGTAVDHAVTIVGYGTEGGI-------DYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPS 339          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.966e-34
Identity = 83/220 (37.73%), Postives = 123/220 (55.91%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG---GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK----ICMGRNVCGV 677
            R+ GAVT VKDQG C SCW+FS  GA+EG + + TGELV+LSEQ L++C+ E         ++GC GG + +A+E+I+K GG+  + DYPY   +G   G  K +   +   +  +  + ++++      V H P+   I++     Q Y  GV     CG  L+HGV++VGYG+          + YW++KNS G  WGE GY K    I   R +CG+
Sbjct:  144 RNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKLETAYEFIMKNGGLGTDNDYPYKAVNGVCDGRLKENNKNV--MIDGYENLPANDESALMKAVAHQPVTAVIDSSSREFQLYESGV-FDGSCGTNLNHGVVVVGYGTE-------NGRDYWLVKNSRGITWGEAGYMKMARNIANPRGLCGI 344          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.966e-34
Identity = 88/229 (38.43%), Postives = 127/229 (55.46%), Query Frame = 3
Query:   33 TLTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGK---YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY-YKICMGRNVCGVDSMVS 692
            T+  R+   VT VKDQG CGSCW+F +TG+LEG + ++ GELVSLSEQQLVDC          +   GC GG  +SAF+Y+++ G +  E +YPY     G C+ D++   + VS     +V S  E  +   +   GP+A+ I+A     + Y+ GV     C      LDH VL +GYG+       ++ + Y+++KNSW  NWG +GY Y      N+CGV S  +
Sbjct:  312 TVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDC-------AILTGSQGCGGGFASSAFQYVMEIGSLATESNYPYL-MQNGLCR-DRTVTPSGVSITGYVNVTSGSESALQNAIATTGPVAIAIDASVDDFRYYMSGVYNNPACKNGLDDLDHEVLAIGYGT-------YQGQDYFLVKNSWSTNWGMDGYVYMARNDNNLCGVSSQAT 524          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.380e-34
Identity = 87/225 (38.67%), Postives = 122/225 (54.22%), Query Frame = 3
Query:   33 TLTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            ++  R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E         + GC GG M +AF+Y+ +  G++ E  YPY G D  SC ++ +  AA    +  I   +E  +   + + GP++V I+A     Q Y  GV     C    ++H VL VGYG         K   +WIIKNSWGE+WG  GY  +   + N CG+ ++ S
Sbjct:  118 SIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE---------NYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQD-ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSDNVNHAVLAVGYGIQ-------KGNKHWIIKNSWGESWGNKGYILMARNKNNACGIANLAS 325          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.758e-34
Identity = 77/220 (35.00%), Postives = 118/220 (53.64%), Query Frame = 3
Query:   60 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGT-DGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICG-KYLDHGVLIVGYGSS----------GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 677
            ++ VK+QG+C  CW+ +A   ++    +   + V +S Q+L+DC+          C +GCNGG +  A+  +L   G+  EKDYP+ G      C   K K  A + +F+++S++E  +A  L  HGP+ V IN   +Q Y  GV  + P  C  + +DH VL+VG+G              +  R    PYWI+KNSWG +WGE GY+++  G N CGV
Sbjct:  139 ISSVKNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCER---------CGNGCNGGFVWDAYLTVLNNSGLASEKDYPFQGDRKPHRCLAKKYKKVAWIQDFTMLSNNEQAIAHYLAVHGPITVTINMKLLQHYQKGVIKATPSSCDPRQVDHSVLLVGFGKKKEGMQTGTVLSHSRKRRHSSPYWILKNSWGAHWGEKGYFRLYRGNNTCGV 349          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.758e-34
Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 3
Query:   33 TLTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 707
            TL  RD   VT VK+Q  CGSCW+FS    +E  + +   + ++LSEQ LV+CD         + ++GC GGLM+ A E IL+ GGV   ++ PY G D G CK    +++ + S   V+  +E+++   LV +GP++V I+   +  Y  G++      + L+H VL+VGYG          + PYWI+KNSWG  WGE GY+++   +N CG+ +  +S A +
Sbjct:  127 TLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCD---------NINNGCAGGLMHWALESILQEGGVVSAENEPYYGFD-GVCKKSPFELSISGSRRYVL-QNENKLRELLVVNGPISVAIDVSDLINYKAGIADICENNEGLNHAVLLVGYGVK-------NDVPYWILKNSWGAEWGEEGYFRVQRDKNSCGMMNEYASSAIL 333          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.664e-33
Identity = 91/223 (40.81%), Postives = 121/223 (54.26%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLV-KHGPLAVGINAVW--MQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV---CGVDSMVS 692
            R  G VT VKDQG CGSCW+FS+ GALEG     TG+L+SLS Q LV C          S ++GC GG M +AFEY+    G++ E  YPY G D  SC +  +  AA    +  I  D ++     V + GP++VGI+A     Q Y  GV     C  + ++H VL VGYG+        K   +WIIKNSWG  WG  GY  + + RN+   CG+ ++ S
Sbjct:  127 RRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYC---------VSNNNGCGGGYMTNAFEYVRLNRGIDSEDAYPYIGQD-ESCMYSPTGKAAKCRGYREIPEDNEKALKRAVARIGPVSVGIDASLPSFQFYSRGVYYDTGCNPENINHAVLAVGYGAQ-------KGTKHWIIKNSWGTEWGNKGY--VLLARNMKQTCGIANLAS 330          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.174e-33
Identity = 80/218 (36.70%), Postives = 117/218 (53.67%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            R  G V  V++QG CGSCW+ S   A+E    + +G  V LS QQLVDC        YG  + GCNGG   + FEY+ K  G+E + DYPY+G +      DKS+    ++ +  +++ E  +   +   GP++  +    M++Y GG+     C G  L HGV +VGYG           + YWIIKN+WG +WGE+GY ++     + CGV+ M S
Sbjct:  117 RSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCS-----TSYG--NHGCNGGFAVNGFEYV-KDNGLESDADYPYSGKEDKCKANDKSRSVVELTGYKKVTASETSLKEAVGTIGPISAVVFGKPMKSYGGGIFDDSSCLGDNLHHGVNVVGYGIE-------NGQKYWIIKNTWGADWGESGYIRLIRDTDHSCGVEKMAS 319          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.839e-33
Identity = 90/233 (38.63%), Postives = 128/233 (54.94%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDE------DQMAANLVKHGPLAVGINAVWMQTYIGGV----SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN------VCGVDSMVS 692
            R  G +T VK QG CG  W+FSATGA+E AH ++TG+LVSLSEQ+LVDC  E +         G   G    +FE++L+ GG+  + DYPY   + G CK +K +    +  + ++I SDE      +Q   + +   P++V I+A     Y GG+    +C    G  ++H VL+VGYGS+           YWI KNSWG +WGE+GY  I + RN      VCG++   S
Sbjct:  142 RKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDCVEESE---------GSYNGWQYQSFEWVLEHGGIATDDDYPYRAKE-GRCKANKIQDKVTIDGYETLIMSDESTESETEQAFLSAILEQPISVSIDAKDFHLYTGGIYDGENCTSPYG--INHFVLLVGYGSADGV-------DYWIAKNSWGFDWGEDGY--IWIQRNTGNLLGVCGMNYFAS 353          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.843e-33
Identity = 75/204 (36.76%), Postives = 117/204 (57.35%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 650
            R+ GAV  VK+QG CGSCW+F A  A+EG + + TG+L+SLSEQQLVDC          + + GC GG    AF+YI+  GG+  E+ YPYTGT+ G+C   ++    ++ ++  + S++++     V + P++V ++A     Q Y  G+     C    +H   + G  +         +K YW +KNSWG+NWGE+GY ++
Sbjct:   10 REKGAVVPVKNQGGCGSCWAFDAIAAVEGINQIVTGDLISLSEQQLVDC---------STRNHGCEGGWPYRAFQYIINNGGINSEEHYPYTGTN-GTCDTKENAHVVSIDSYRNVPSNDEKSLQKAVANQPVSVTMDAAGRDFQLYRNGIFTG-SCNISANHYRTVGGRETE-------NDKDYWTVKNSWGKNWGESGYIRV 195          
The following BLAST results are available for this feature:
BLAST of CF832441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
ACTN_ACTCH1.153e-3436.04Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CPR3_ARATH1.966e-3437.73Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CFAD_DICDI1.966e-3438.43Counting factor associated protein D OS=Dictyostel... [more]
CATK_RABIT4.380e-3438.67Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATW_MOUSE9.758e-3435.00Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CATV_GVCP9.758e-3436.89Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CATK_CHICK1.664e-3340.81Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
CATLL_PHACE2.174e-3336.70Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
P34_SOYBN2.839e-3338.63P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CPGP1_ZINOF4.843e-3336.76Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832441 ID=CF832441; Name=CF832441; organism=Citrus sinensis; type=EST; length=853bp
CTCCTTCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGTTCGTGAT
CACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTG
GTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGG
GCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAG
TGTGATCCAGAGGAATATGGTTCATGTGACTCTGGGTGCAATGGTGGGCT
AATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAG
AGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGAC
AAAAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGA
TGAAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGG
GTATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCA
TACATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGG
ATCCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCA
TAAAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATC
TGCATGGGTCGCAATGTCTGTGGGGTCGACTCCATGGTCTCATCTGTAGC
TGCTATCCATACAACCTCAAGCTAGACATTATGGAGGTTGTGCTAGGCAA
GTGGAGCTTCTGTACCTAGATATTATAGGATATCCTTTTAAATATCCGTC
TGCAATTATAACGATGCCTACATGCCTGGGCTGAGGCATGAACTTTCTAT
GCT
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