CF832441

Overview
NameCF832441
Unique NameCF832441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.322e-22
Identity = 82/235 (34.89%), Postives = 111/235 (47.23%), Query Frame = 3
Query:   72 KDQGACGSCWSFSATGALEGAHFLSTGEL-VSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYG----SSGFAPI----------RFKEK----------PYWIIKNSWGENWGENGYYKICMGR----NVCGVDSMV 689
            KDQG CGSCW+F+A G  E  +  +  E+ +S SEQQ+VDC  E         + GC+GG    AF Y++   GV    +YPY G +   C   +  +   V     +  +E  MA N V    +AVG +  ++  Y GGV     C   L+H VL+VGYG    S  F             ++KE            YWI++NSWG NWGE GY +I   +      CGV S V
Sbjct:  279 KDQGNCGSCWAFAAIGNFEYLYVHTRHEMPISFSEQQMVDCSTE---------NYGCDGGNPFYAFLYMIN-NGVCLGDEYPYKGHEDFFCLNYRCSLLGRVHFIGDVKPNELIMALNYVGPVTIAVGASEDFV-LYSGGV-FDGECNPELNHSVLLVGYGQVKKSLAFEDSHSNVDSNLIKKYKENIKGDDDDDIIYYWIVRNSWGPNWGEGGYIRIKRNKAGDDGFCGVGSDV 501          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.322e-22
Identity = 71/233 (30.47%), Postives = 109/233 (46.78%), Query Frame = 3
Query:   60 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS--LSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-----DEDQMAANLVKHGPLAVGINA----------VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 707
            VT V++QG+CGSC+SF++ G +E    + T    +  LS Q++V C              GC GG          +  G+  E  +PYTGTD   C+  +       S +  +       +E  M   LV  GP+AV              V+  T   G+  P+   +  +H VL+VGYG+   + +      YWI+KNSWG +WGENGY++I  G + C ++S+  +   I
Sbjct:  246 VTPVRNQGSCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQ---------GCEGGFPYLIAGKYAQDFGLVEEDCFPYTGTDS-PCRLKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHQGPMAVAFEVYDDFLHYRKGVYHHT---GLRDPFNPFELTNHAVLLVGYGTDAASGL-----DYWIVKNSWGTSWGENGYFRIRRGTDECAIESIALAATPI 460          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.726e-22
Identity = 71/233 (30.47%), Postives = 108/233 (46.35%), Query Frame = 3
Query:   60 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS--LSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-----DEDQMAANLVKHGPLAVGINA----------VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 707
            V+ V++Q +CGSC+SF++ G LE    + T    +  LS Q++V C              GC GG          +  G+  E  +PYTGTD   CK  +       S +  +       +E  M   LV HGP+AV              ++  T   G+  P+   +  +H VL+VGYG+   + +      YWI+KNSWG  WGENGY++I  G + C ++S+  +   I
Sbjct:  246 VSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQYAQ---------GCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDS-PCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHT---GLRDPFNPFELTNHAVLLVGYGTDSASGM-----DYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATPI 460          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATC_SCHMA (Cathepsin C OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.023e-22
Identity = 72/231 (31.17%), Postives = 111/231 (48.05%), Query Frame = 3
Query:   60 VTGVKDQGACGSCWSFSATGALEGAHFLSTG--ELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYIL--KAG---GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-----SSDEDQMAANLVKHGPLAVGINA----------VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 686
            VT +++QG CGSC++  +  ALE    L +   E   LS Q +VDC    +         GCNGG     F +++  K G   G+ ++   PYTG D G C   K+      +++S I     +++E  M   L+ +GP  VG             ++  T +      +   +  +H VL+VGYG       +   +PYW +KNSWG  WGE GY++I  G + CGV+S+
Sbjct:  235 VTPIRNQGICGSCYASPSAAALEARIRLVSNFSEQPILSPQTVVDCSPYSE---------GCNGG-----FPFLIAGKYGEDFGLPQKIVIPYTGEDTGKCTVSKNCTRYYTTDYSYIGGYYGATNEKLMQLELISNGPFPVGFEVYEDFQFYKEGIYHHTTVQTDHYNFNPFELTNHAVLLVGYGVD-----KLSGEPYWKVKNSWGVEWGEQGYFRILRGTDECGVESL 446          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.023e-22
Identity = 70/233 (30.04%), Postives = 108/233 (46.35%), Query Frame = 3
Query:   60 VTGVKDQGACGSCWSFSATGALEGAHFL--STGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-----DEDQMAANLVKHGPLAVGINA----------VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 707
            V+ V++Q +CGSC+SF++ G LE    +  S  +   LS Q++V C              GC GG          +  G+  E  +PYTGTD   CK  +       S +  +       +E  M   LV HGP+AV              ++  T   G+  P+   +  +H VL+VGYG+   + +      YWI+KNSWG  WGE+GY++I  G + C ++S+  +   I
Sbjct:  246 VSPVRNQASCGSCYSFASMGMLEARIRILTSNSQTPILSPQEVVSCSQYAQ---------GCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDS-PCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHT---GLRDPFNPFELTNHAVLLVGYGTDSASGM-----DYWIVKNSWGTGWGEDGYFRIRRGTDECAIESIAVAATPI 460          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.568e-22
Identity = 78/245 (31.84%), Postives = 115/245 (46.94%), Query Frame = 3
Query:   36 LTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE-LVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKP--------------------------YWIIKNSWGENWGENGYYKICM---GRNV-CGV 677
            L  R+ G V   KDQG CGSCW+F++ G +E  +     + +++LSEQ++VDC            + GC+GG    +F Y ++  G+    DY Y   D   C   + K    +S+   +  +E   A N V  GP++V +      ++ GG      C + L+H VL+VGYG    + I F+EK                           YWIIKNSW + WGENG+ +I     G NV CG+
Sbjct:  343 LDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDC---------SKLNFGCDGGHPFYSFIYAIE-NGICMGDDYKYKAMDNLFCLNYRCKNKVTLSSVGGVKENELIRALNEV--GPVSVNVGVTDDFSFYGGGIFNGTCTEELNHSVLLVGYGQVQSSKI-FQEKNAYDDASGVTKKGALSYPSKADDGIQYYWIIKNSWSKFWGENGFMRISRNKEGDNVFCGI 574          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATL1_FELCA (Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.473e-21
Identity = 55/143 (38.46%), Postives = 81/143 (56.64%), Query Frame = 3
Query:  243 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR 662
            GGL++ AF+Y+   GG++ E+ YPY    G SCK+      A V+++  I S E+++   L   GP++  I+A     + Y  G+     C    +DHGVL+VGYG+ G      + K YWIIKNSWG +WG +GY K+   R
Sbjct:    1 GGLIDDAFQYVKDNGGLDSEESYPYHA-QGDSCKYRPENSVANVTDYWDIPSKENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSEDVDHGVLVVGYGADG---TETENKKYWIIKNSWGTDWGMDGYIKMAKDR 139          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: GMSA_DICDI (Gamete and mating-type specific protein A OS=Dictyostelium discoideum GN=gmsA PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-20
Identity = 69/211 (32.70%), Postives = 97/211 (45.97%), Query Frame = 3
Query:   33 TLTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG----ELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA-VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 650
            TLTV      T ++DQG CGSCW+F+++ ALE  + +  G      + LS Q  V+C             SGCNGG   + F +  K  G+  EKD PY    G SC    S      +N+      +  + A L K GP+ + +      Q Y  G+         ++H VL+VGY  +  A         + IKNSWG  WGE+GY +I
Sbjct:  241 TLTVDWTSYQTPIRDQGQCGSCWAFASSAALESRYLIKYGTAQKSTLQLSNQNAVNC-----------IASGCNGGWSGNYFNF-FKTPGIAYEKDDPYKAVTGTSCITTSSVARFKYTNYGYTEKTKAALLAEL-KKGPVTIAVYVDSAFQNYKSGIYNSATKYTGINHLVLLVGYDQATDA---------YKIKNSWGSWWGESGYMRI 429          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATC_CANFA (Dipeptidyl-peptidase 1 (Fragment) OS=Canis familiaris GN=CTSC PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-20
Identity = 70/238 (29.41%), Postives = 109/238 (45.80%), Query Frame = 3
Query:   42 VRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS--LSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG----GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA----------VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 707
            VR    V+ V++Q +CGSC++F++T  LE    + T    +  LS Q++V C              GC GG          +  G+  E  +PY G+D       C    S     V  F   + +E  M   LV+HGP+AV              ++  T   G+  P+   +  +H VL+VGYG+   + +      YWI+KNSWG  WGE+GY++I  G + C ++S+  +   I
Sbjct:  213 VRGTNFVSPVRNQASCGSCYAFASTAMLEARIRILTNNTQTPILSPQEIVSCSQYAQ---------GCEGGFPYLIAGKYAQDFGLVEEACFPYAGSDSPCKPNDCFRYYSSEYYYVGGFYG-ACNEALMKLELVRHGPMAVAFEVYDDFFHYQKGIYYHT---GLRDPFNPFELTNHAVLLVGYGTDSASGM-----DYWIVKNSWGSRWGEDGYFRIRRGTDECAIESIAVAATPI 432          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATL3_PARTE (Putative cathepsin L 3 OS=Paramecium tetraurelia GN=GSPATT00022199001 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.756e-20
Identity = 68/226 (30.09%), Postives = 113/226 (50.00%), Query Frame = 3
Query:    6 SSLPTIFLLTLTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 677
            +SLP + L  L   D    T VK+QG C S W+FS + +LE  + +   + ++ S QQ+VDCD+          ++GC+GG    A EY+L+ G V    +YPY   +  +CK  ++     ++ +S +   +  +   L  + P++VG+ A   Q Y  G+  +C        +H  L VG+ S+            WI++NSWG  WGE+G  ++   +N CG+
Sbjct:  102 ASLPEVQLEGLGAVDWRNYTTVKEQGQCASGWAFSVSNSLEAWYAIRGFQKINASTQQIVDCDYN---------NTGCSGGYNAYAMEYVLRVGLVS-STNYPYVAKN-QTCKQSRNG-TYFINGYSFVGGSQSNLQYYLNNY-PISVGVEASNWQFYRSGLFSNC---SSNGTNHYALAVGFDSAN----------NWIVQNSWGTQWGESGNIRL-YPQNTCGI 300          
The following BLAST results are available for this feature:
BLAST of CF832441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
CYSP_PLAVN1.322e-2234.89Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]
CATC_BOVIN1.322e-2230.47Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]
CATC_HUMAN1.726e-2230.47Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]
CATC_SCHMA5.023e-2231.17Cathepsin C OS=Schistosoma mansoni PE=2 SV=1[more]
CATC_PONAB5.023e-2230.04Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]
CYSP_PLAVS8.568e-2231.84Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
CATL1_FELCA9.473e-2138.46Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE... [more]
GMSA_DICDI2.110e-2032.70Gamete and mating-type specific protein A OS=Dicty... [more]
CATC_CANFA2.110e-2029.41Dipeptidyl-peptidase 1 (Fragment) OS=Canis familia... [more]
CATL3_PARTE2.756e-2030.09Putative cathepsin L 3 OS=Paramecium tetraurelia G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832441 ID=CF832441; Name=CF832441; organism=Citrus sinensis; type=EST; length=853bp
CTCCTTCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGTTCGTGAT
CACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTG
GTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGG
GCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAG
TGTGATCCAGAGGAATATGGTTCATGTGACTCTGGGTGCAATGGTGGGCT
AATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAG
AGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGAC
AAAAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGA
TGAAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGG
GTATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCA
TACATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGG
ATCCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCA
TAAAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATC
TGCATGGGTCGCAATGTCTGTGGGGTCGACTCCATGGTCTCATCTGTAGC
TGCTATCCATACAACCTCAAGCTAGACATTATGGAGGTTGTGCTAGGCAA
GTGGAGCTTCTGTACCTAGATATTATAGGATATCCTTTTAAATATCCGTC
TGCAATTATAACGATGCCTACATGCCTGGGCTGAGGCATGAACTTTCTAT
GCT
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