CF832441

Overview
NameCF832441
Unique NameCF832441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: PEPT1_DERFA (Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.787e-19
Identity = 71/220 (32.27%), Postives = 103/220 (46.82%), Query Frame = 3
Query:   36 LTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVK-HGPLAV--GINAV-WMQTYIGGVSCPYICGKYLD-HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 680
            L +R    VT ++ QG CGSCW+FS   A E A+       + LSEQ+LVDC          +   GC+G  +    EYI + G VE E+ YPY   +   C+   S+     +   +   D  Q+   L + H  +AV  GI  +   Q Y G     +  G   + H V IVGYGS+       +   YWI++NSW   WG++GY     G N+  ++
Sbjct:  113 LDLRSLRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNTSLDLSEQELVDC----------ASQHGCHGDTIPRGIEYIQQNGVVE-ERSYPYVARE-QRCRRPNSQHYGISNYCQIYPPDVKQIREALTQTHTAIAVIIGIKDLRAFQHYDGRTIIQHDNGYQPNYHAVNIVGYGST-------QGDDYWIVRNSWDTTWGDSGYGYFQAGNNLMMIE 313          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.158e-18
Identity = 69/220 (31.36%), Postives = 101/220 (45.91%), Query Frame = 3
Query:   36 LTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANL-VKHGPLAV--GINAVWMQTYIGG--VSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 680
            + +R  G VT +K+Q ACGSCW+FS    +E  +       + LSEQ+LVDC          +   GC G  + +   YI K G VE E+ YPY   + G C+   +K         +   + D++   L  K   L+V  GI  +    +  G  +      GK   H + IVGYGS        +   YWII+NSW   WG+ GY      +N+ G++
Sbjct:  114 IDLRALGYVTKIKNQVACGSCWAFSGVATVESNYLSYDNVSLDLSEQELVDC----------ASQHGCGGDTVLNGLRYIQKNGVVE-EQSYPYKARE-GRCQRPNAKRYGIKDLCQIYPPNGDKIRTYLATKQAALSVIIGIRDLDSFRHYDGRTILQSDNGGKRNFHAINIVGYGSK-------QGVRYWIIRNSWDTTWGDKGYGYFVADKNLMGIE 314          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CPR4_CAEEL (Cathepsin B-like cysteine proteinase 4 OS=Caenorhabditis elegans GN=cpr-4 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.369e-18
Identity = 66/248 (26.61%), Postives = 107/248 (43.15%), Query Frame = 3
Query:   57 AVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS--LSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAG---GVEREKDY---PYTGTDGG---------SCKFDKSKIAAAVS-----NFSV--------------ISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 689
            ++  ++DQ  CGSCW+F+A  A      +++   V+  LS + ++ C          +C  GC GG   +A++Y++K+G   G   E  +   PY+    G         SC  D     A V+     N++V              +     Q+ A ++ HGP+            Y  GV       +   H + I+G+G+    P       YW++ NSW  NWGENGY++I  G N CG++  V
Sbjct:   96 SINNIRDQSDCGSCWAFAAAEAASDRFCIASNGAVNTLLSAEDVLSC--------CSNCGYGCEGGYPINAWKYLVKSGFCTGGSYEAQFGCKPYSLAPCGETVGNVTWPSCPDDGYDTPACVNKCTNKNYNVAYTADKHFGSTAYAVGKKVSQIQAEIIAHGPVEAAFTVYEDFYQYKTGVYVHTTGQELGGHAIRILGWGTDNGTP-------YWLVANSWNVNWGENGYFRIIRGTNECGIEHAV 328          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATB1_GIALA (Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=2 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 3.369e-18
Identity = 72/227 (31.72%), Postives = 102/227 (44.93%), Query Frame = 3
Query:   75 DQGACGSCWSFSATGALEGAHFLSTG---ELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVERE--KDYPYTGTDGGSCKF---DKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGI----------NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSV 698
            DQG+CGSCW+FSA G   G    + G   E VS S+Q L+ C  E         + GC+GG     + ++   G    E  K   Y  T    C     D S I    ++ +  +S     +   LV  GPL   I          + V+  TY G ++  +       H + IVGYG++           YWIIKNSWG +WGENGY++I  G N C ++  + +V
Sbjct:   98 DQGSCGSCWAFSAIGVF-GDRRCAMGIDKEAVSYSQQHLISCSLE---------NFGCDGGDFQPTWSFLTFTGATTAECVKYVDYGHTVASPCPAVCDDGSPIQLYKAHGYGQVSKSVPAIMGMLVAGGPLQTMIVVYADLSYYESGVYKHTY-GTINLGF-------HALEIVGYGTTDDGT------DYWIIKNSWGPDWGENGYFRIVRGVNECRIEDEIYAV 300          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATB2_GIALA (Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 67/218 (30.73%), Postives = 100/218 (45.87%), Query Frame = 3
Query:   69 VKDQGACGSCWSFSATGALEGAHFLS--TGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT-------GTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVG--INAVWMQTYIGGVSCPYICGKYLD--HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 680
            V DQG CGSCW+FS+         ++    + V  S Q +V CDH          D  CNGG + + ++++ K G    ++  PY        GT    C    SK+  A  +++     D   M   L   GPL V   +++ +M    G     Y    Y++  H V +VGYG+            YWIIKNSWG +WGE+GY+++  G N C ++
Sbjct:   92 VVDQGGCGSCWAFSSVATFGDRRCVAGLDKKPVKYSPQYVVSCDHG---------DMACNGGWLPNVWKFLTKTG-TTTDECVPYKSGSTTLRGTCPTKCADGSSKVHLATATSYKDYGLDIPAMMKALSTSGPLQVAFLVHSDFMYYESGVYQHTY---GYMEGGHAVEMVGYGTDDDGV------DYWIIKNSWGPDWGEDGYFRMIRGINDCSIE 290          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CPR1_CAEEL (Gut-specific cysteine proteinase OS=Caenorhabditis elegans GN=cpr-1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.725e-17
Identity = 69/255 (27.06%), Postives = 107/255 (41.96%), Query Frame = 3
Query:    6 SSLPTIFLLTLTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST--GELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVERE-------KDYPYTGTDGGSCKFDK------------SKIAAAVSNFSV----ISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLD-HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 689
            +S+P  F       +  ++  ++DQ  CGSCW+F A   +     + T   +   +S   L+ C   C      SC +GC GG    A  +    G V          K YP      G+C   K            S   A   +F V    +  +   + A +  +GP+    +       Y  GV   +  GKYL  H + I+G+G+   +P       YW++ NSWG NWGE+G++KI  G + CG++S V
Sbjct:   83 ASVPATFDSRTQWSECKSIKLIRDQATCGSCWAFGAAEMISDRTCIETKGAQQPIISPDDLLSC---CG----SSCGNGCEGGYPIQALRWWDSKGVVTGGDYHGAGCKPYPIAPCTSGNCPESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKNAASIQAEIYANGPVEAAFSVYEDFYKYKSGVY-KHTAGKYLGGHAIKIIGWGTESGSP-------YWLVANSWGVNWGESGFFKIYRGDDQCGIESAV 322          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: PEPT1_EURMA (Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.865e-17
Identity = 63/207 (30.43%), Postives = 97/207 (46.86%), Query Frame = 3
Query:   36 LTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVK-HGPLAV--GINAVWMQTYIGGVSCPYICGKYLD--HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 641
            L +R    VT ++ QG CGSCW+FS   + E A+       + L+EQ+LVDC          +  +GC+G  +    EYI +  GV +E  YPY   +  SC    ++     +   +   D +++   L + H  +AV  GI  +    +  G +       Y    H V IVGYG++       +   YWI++NSW   WG+NGY
Sbjct:  113 LDLRSLRTVTPIRMQGGCGSCWAFSGVASTESAYLAYRNMSLDLAEQELVDC----------ASQNGCHGDTIPRGIEYI-QQNGVVQEHYYPYVARE-QSCHRPNAQRYGLKNYCQISPPDSNKIRQALTQTHTAVAVIIGIKDLNAFRHYDGRTIMQHDNGYQPNYHAVNIVGYGNT-------QGVDYWIVRNSWDTTWGDNGY 300          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATB_RAT (Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.299e-17
Identity = 72/254 (28.35%), Postives = 113/254 (44.49%), Query Frame = 3
Query:   60 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSL--SEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYI----LKAGGVEREKD--YPYT---------------GTDGGSCKFDKSKIAAAVSNFSV----------ISSDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTT 716
            +  ++DQG+CGSCW+F A  A+     + T   V++  S + L+ C   C  +    C  GCNGG  + A+ +     L +GGV        PYT                 +G + K +K   A   +++            +S  E ++ A + K+GP+  G   V+    TY  GV           H + I+G+G     P       YW++ NSW  +WG+NG++KI  G N CG++S +  VA I  T
Sbjct:   96 IAQIRDQGSCGSCWAFGAVEAMSDRICIHTNGRVNVEVSAEDLLTC---CGIQ----CGDGCNGGYPSGAWNFWTRKGLVSGGVYNSHIGCLPYTIPPCEHHVNGSRPPCTGEGDTPKCNKMCEAGYSTSYKEDKHYGYTSYSVSDSEKEIMAEIYKNGPVE-GAFTVFSDFLTYKSGVYKHEAGDVMGGHAIRILGWGIENGVP-------YWLVANSWNVDWGDNGFFKILRGENHCGIESEI--VAGIPRT 332          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.415e-16
Identity = 61/207 (29.47%), Postives = 97/207 (46.86%), Query Frame = 3
Query:   36 LTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVK-HGPLAV--GINAVWMQTYIGGVSCPYICGKYLD--HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 641
            + +R    VT ++ QG CGSCW+FS   A E A+     + + L+EQ+LVDC          +   GC+G  +    EYI +  GV +E  Y Y   +  SC+   ++     +   +   + +++   L + H  +AV  GI  +    +  G +       Y    H V IVGY ++       +   YWI++NSW  NWG+NGY
Sbjct:  112 IDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNQSLDLAEQELVDC----------ASQHGCHGDTIPRGIEYI-QHNGVVQESYYRYVARE-QSCRRPNAQRFGISNYCQIYPPNVNKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPNYHAVNIVGYSNA-------QGVDYWIVRNSWDTNWGDNGY 299          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: YCF2E_CAEEL (Uncharacterized peptidase C1-like protein F26E4.3 OS=Caenorhabditis elegans GN=F26E4.3 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 7.025e-16
Identity = 74/242 (30.58%), Postives = 106/242 (43.80%), Query Frame = 3
Query:   69 VKDQGACGSCWSFSATG-ALEGAHFLSTGELVS-LSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG---TDGGSCKFDK----------------SKIAAAVSNFSVISSDEDQMAANLVKHGPL-AVGINAVWMQTYIGGV----------SCPYICGKYLDHGVLIVGYG---SSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 689
            V DQG CGS WS S T  + +    +S G + S LS QQL+ C+             GC GG ++ A+ YI K G V  +  YPY      + G C   K                   A  ++    +SS E+ +   L+ +GP+ A  +       Y GGV              +   Y  H V ++G+G   S+G  PI+     YW+  NSWG  WGE+GY+K+  G N C ++S V
Sbjct:  201 VADQGDCGSSWSVSTTAISSDRLAIISEGRINSTLSSQQLLSCNQHRQ--------KGCEGGYLDRAWWYIRKLG-VVGDHCYPYVSGQSREPGHCLIPKRDYTNRQGLRCPSGSQDSTAFKMTPPYKVSSREEDIQTELMTNGPVQATFVVHEDFFMYAGGVYQHSDLAAQKGASSVAEGY--HSVRVLGWGVDHSTG-KPIK-----YWLCANSWGTQWGEDGYFKVLRGENHCEIESFV 425          
The following BLAST results are available for this feature:
BLAST of CF832441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
PEPT1_DERFA1.787e-1932.27Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 P... [more]
PEPT1_PSOOV1.158e-1831.36Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]
CPR4_CAEEL3.369e-1826.61Cathepsin B-like cysteine proteinase 4 OS=Caenorha... [more]
CATB1_GIALA3.369e-1831.72Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=... [more]
CATB2_GIALA4.400e-1830.73Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=... [more]
CPR1_CAEEL3.725e-1727.06Gut-specific cysteine proteinase OS=Caenorhabditis... [more]
PEPT1_EURMA4.865e-1730.43Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV... [more]
CATB_RAT8.299e-1728.35Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2[more]
PEPT1_DERPT2.415e-1629.47Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]
YCF2E_CAEEL7.025e-1630.58Uncharacterized peptidase C1-like protein F26E4.3 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832441 ID=CF832441; Name=CF832441; organism=Citrus sinensis; type=EST; length=853bp
CTCCTTCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGTTCGTGAT
CACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTG
GTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGG
GCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAG
TGTGATCCAGAGGAATATGGTTCATGTGACTCTGGGTGCAATGGTGGGCT
AATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAG
AGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGAC
AAAAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGA
TGAAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGG
GTATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCA
TACATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGG
ATCCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCA
TAAAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATC
TGCATGGGTCGCAATGTCTGTGGGGTCGACTCCATGGTCTCATCTGTAGC
TGCTATCCATACAACCTCAAGCTAGACATTATGGAGGTTGTGCTAGGCAA
GTGGAGCTTCTGTACCTAGATATTATAGGATATCCTTTTAAATATCCGTC
TGCAATTATAACGATGCCTACATGCCTGGGCTGAGGCATGAACTTTCTAT
GCT
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