CF832441

Overview
NameCF832441
Unique NameCF832441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATB_MOUSE (Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.025e-16
Identity = 71/251 (28.29%), Postives = 111/251 (44.22%), Query Frame = 3
Query:   69 VKDQGACGSCWSFSATGALEGAHFLSTGELVSL--SEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILK----AGGVEREKD--YPYT---------------GTDGGSCKFDKSKIAAAVSNFSV----------ISSDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTT 716
            ++DQG+CGSCW+F A  A+     + T   V++  S + L+ C   C  +    C  GCNGG  + A+ +  K    +GGV        PYT                 +G + + +KS  A    ++            +S+   ++ A + K+GP+  G   V+    TY  GV           H + I+G+G     P       YW+  NSW  +WG+NG++KI  G N CG++S +  VA I  T
Sbjct:   99 IRDQGSCGSCWAFGAVEAISDRTCIHTNGRVNVEVSAEDLLTC---CGIQ----CGDGCNGGYPSGAWSFWTKKGLVSGGVYNSHVGCLPYTIPPCEHHVNGSRPPCTGEGDTPRCNKSCEAGYSPSYKEDKHFGYTSYSVSNSVKEIMAEIYKNGPVE-GAFTVFSDFLTYKSGVYKHEAGDMMGGHAIRILGWGVENGVP-------YWLAANSWNLDWGDNGFFKILRGENHCGIESEI--VAGIPRT 332          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATB3_GIALA (Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.044e-15
Identity = 64/217 (29.49%), Postives = 91/217 (41.94%), Query Frame = 3
Query:   69 VKDQGACGSCWSFSATGALEGAHFLS--TGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG--GSCKF---DKSKIAAAVSNFSVISSDEDQMAAN--LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLD-HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 689
            V DQG CGSCW+FS+  ++      +    + V  S Q +V CD           D  C+GG + S + ++ K G    E     +G+ G  G+C     D S +         +    D  A    L   GPL           Y       +  G+    H V +VGYG+            YWIIKNSWG +WGE+GY++I    N CG++  V
Sbjct:   91 VVDQGGCGSCWAFSSVASVGDRRCFAGLDKKAVKYSPQYVVSCDRG---------DMACDGGWLPSVWRFLTKTGTTTDECVPYQSGSTGARGTCPTKCADGSDLPHLYKATKAVDYGLDAPAIMKALATGGPLQTAFTVYSDFMYYESGVYQHTYGRVEGGHAVDMVGYGTDDDGV------DYWIIKNSWGPDWGEDGYFRIIRMTNECGIEEQV 292          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATZ_HUMAN (Cathepsin Z OS=Homo sapiens GN=CTSZ PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.730e-14
Identity = 59/205 (28.78%), Postives = 97/205 (47.32%), Query Frame = 3
Query:   87 CGSCWSFSATGAL-EGAHFLSTGELVS--LSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKS------KIAAAVSNFSVIS-------SDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 650
            CGSCW+ ++T A+ +  +    G   S  LS Q ++DC +       GSC+ G +  + + A ++     G+  E    Y   D    KF++       K   A+ N+++         S  ++M A +  +GP++ GI A   +  Y GG+   Y    Y++H V + G+G S           YWI++NSWGE WGE G+ +I
Sbjct:   89 CGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGNA------GSCEGGNDLSVWDYAHQH-----GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATERLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTE-------YWIVRNSWGEPWGERGWLRI 275          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATZ_BOVIN (Cathepsin Z OS=Bos taurus GN=CTSZ PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.913e-13
Identity = 58/205 (28.29%), Postives = 90/205 (43.90%), Query Frame = 3
Query:   87 CGSCWSFSATGAL-EGAHFLSTGELVS--LSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-------------SDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 650
            CGSCW+  +T A+ +  +    G   S  LS Q ++DC       + GSC+ G +  +   A  +     G+  E    Y   D    KF++           VI              S  ++M A +  +GP++ GI A   M  Y GG+   Y    +++H V + G+G S           YWI++NSWGE WGE+G+ +I
Sbjct:   90 CGSCWAHGSTSAMADRINIKRKGAWPSTLLSVQHVIDCG------DAGSCEGGNDLPVWEYAHRH-----GIPDETCNNYQAKDQECDKFNQCGTCTEFKECHVIKNYTLWKVGDYGSLSGREKMMAEIYTNGPISCGIMATEKMSNYTGGIYSEYNDQAFINHIVSVAGWGVSD-------GMEYWIVRNSWGEPWGEHGWMRI 276          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATZ_RAT (Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.567e-13
Identity = 61/205 (29.76%), Postives = 93/205 (45.37%), Query Frame = 3
Query:   87 CGSCWSFSATGAL-EGAHFLSTGELVS--LSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKS------KIAAAVSNFSVIS-------SDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 650
            CGSCW+  +T AL +  +    G   S  LS Q ++DC +       GSC+    GG     +EY  K G +  E    Y   D    KF++       K    + N+++         S  ++M A +  +GP++ GI A   M  Y GG+   Y     ++H + + G+G S           YWI++NSWGE WGE G+ +I
Sbjct:   91 CGSCWAHGSTSALADRINIKRKGAWPSTLLSVQNVIDCGNA------GSCE----GGNDLPVWEYAHKHG-IPDETCNNYQAKDQECDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATERMSNYTGGIYTEYQNQAIINHIISVAGWGVSNDGI------EYWIVRNSWGEPWGERGWMRI 278          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATZ_MOUSE (Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.240e-12
Identity = 59/205 (28.78%), Postives = 93/205 (45.37%), Query Frame = 3
Query:   87 CGSCWSFSATGAL-EGAHFLSTGELVS--LSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKS------KIAAAVSNFSVIS-------SDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 650
            CGSCW+  +T A+ +  +    G   S  LS Q ++DC +       GSC+    GG     +EY  K G +  E    Y   D    KF++       K    + N+++         S  ++M A +  +GP++ GI A   M  Y GG+   +     ++H + + G+G S           YWI++NSWGE WGE G+ +I
Sbjct:   91 CGSCWAHGSTSAMADRINIKRKGAWPSILLSVQNVIDCGNA------GSCE----GGNDLPVWEYAHKHG-IPDETCNNYQAKDQDCDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATEMMSNYTGGIYAEHQDQAVINHIISVAGWGVSNDGI------EYWIVRNSWGEPWGEKGWMRI 278          
The following BLAST results are available for this feature:
BLAST of CF832441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
CATB_MOUSE7.025e-1628.29Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2[more]
CATB3_GIALA2.044e-1529.49Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=... [more]
CATZ_HUMAN1.730e-1428.78Cathepsin Z OS=Homo sapiens GN=CTSZ PE=1 SV=1[more]
CATZ_BOVIN1.913e-1328.29Cathepsin Z OS=Bos taurus GN=CTSZ PE=2 SV=2[more]
CATZ_RAT5.567e-1329.76Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2[more]
CATZ_MOUSE1.240e-1228.78Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832441 ID=CF832441; Name=CF832441; organism=Citrus sinensis; type=EST; length=853bp
CTCCTTCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGTTCGTGAT
CACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTG
GTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGG
GCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAG
TGTGATCCAGAGGAATATGGTTCATGTGACTCTGGGTGCAATGGTGGGCT
AATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAG
AGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGAC
AAAAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGA
TGAAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGG
GTATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCA
TACATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGG
ATCCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCA
TAAAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATC
TGCATGGGTCGCAATGTCTGTGGGGTCGACTCCATGGTCTCATCTGTAGC
TGCTATCCATACAACCTCAAGCTAGACATTATGGAGGTTGTGCTAGGCAA
GTGGAGCTTCTGTACCTAGATATTATAGGATATCCTTTTAAATATCCGTC
TGCAATTATAACGATGCCTACATGCCTGGGCTGAGGCATGAACTTTCTAT
GCT
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