CF832441

Overview
NameCF832441
Unique NameCF832441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:500..1351. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.699e-41
Identity = 93/225 (41.33%), Postives = 131/225 (58.22%), Query Frame = 3
Query:   30 LTLTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            L +  R+  AVT VKDQG CGSC+SFS TG++EG   + TG+LVSLSEQ ++DC        +G  + GCNGGLM +AFEYI+K  G+  E+ YPY       CKF +  +AA ++++  I + ++    N +   P++V I+A     Q Y  GV     C  + LDHGVL VG G+          + Y+I+KNSWG +WG NGY  +   + N CG+ +M S
Sbjct:  123 LNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCS-----SSFG--NEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDECKFQEGSVAAKITSYKEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSEDLDHGVLAVGMGTD-------NGEDYYIVKNSWGPSWGLNGYIHMARNKDNNCGISTMAS 333          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.699e-41
Identity = 96/223 (43.05%), Postives = 131/223 (58.74%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 692
            R+ G V+ VK+QG CGSCW+FS TGALE A+  +TG+ +SLSEQQLVDC        +   + GCNGGL + AFEYI   GG++ E+ YPY G + G CKF    +   V    N ++ + DE + A  LV+  P++V    +   + Y  GV     CG     ++H VL VGYG            PYW+IKNSWG +WG+ GY+K+ MG+N+CGV +  S
Sbjct:  150 REDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCG-------FAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVN-GICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVR--PVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGV-------PYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCAS 355          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.699e-41
Identity = 97/225 (43.11%), Postives = 129/225 (57.33%), Query Frame = 3
Query:   45 RDHGAVTG-VKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGVDSMVS 692
            RD GAV   VK+QG CGSCW+FSA  A+EG + + TGELVSLSEQ+LV+C            +SGCNGG+M+ AF +I + GG++ E+DYPYT  DG      +S+   ++  F  +  +++      V H P++V I+A     Q Y  GV     CG  LDHGV+ VGYG+            YW ++NSWG +WGENGY  I M RNV      CG+  M S
Sbjct:  162 RDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQ-------NSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGR-CGTNLDHGVVAVGYGTDAAT-----GAAYWTVRNSWGPDWGENGY--IRMERNVTARTGKCGIAMMAS 371          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.699e-41
Identity = 97/220 (44.09%), Postives = 126/220 (57.27%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG-RNVCGVDSMVS 692
            R+ G VT VK+QG CGSCW+FSATGALEG  F  TG L+SLSEQ LVDC     P+     + GCNGGLM+ AF+Y+   GG++ E+ YPY  T+  SCK++     A  + F  I   E  +   +   GP++V I+A       Y  G+   P    + +DHGVL+VGY   GF         YW++KNSWGE WG  GY K+    RN CG+ S  S
Sbjct:  121 REKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCS---GPQG----NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATE-ESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGY---GFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAAS 329          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.832e-41
Identity = 98/225 (43.56%), Postives = 129/225 (57.33%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN------VCGVDSMVS 692
            R  GAV  VKDQG CGSCW+FS   A+EG + ++TG L SLSEQ+L+DCD         + +SGCNGGLM+ AF+YI+  GG+ +E DYPY   + G C+  K  +    +S +  +  ++D+     + H P++V I A     Q Y GGV     CG  LDHGV  VGYGSS       K   Y I+KNSWG  WGE G+  I M RN      +CG++ M S
Sbjct:  144 RKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCD--------TTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYL-MEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNGK-CGTDLDHGVAAVGYGSS-------KGSDYVIVKNSWGPRWGEKGF--IRMKRNTGKPEGLCGINKMAS 349          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 6.310e-41
Identity = 96/217 (44.24%), Postives = 123/217 (56.68%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGS-CDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 677
            R  GAVT VKDQG CGSCW+FS TG +EG HFL TG LVSLSEQQLVDC         GS  + GCNGG +  A  Y+   GGV+ E  YPY   D  +C+F+ + I A  + +  I+   +       +  GP++V I+A     Q+Y  GV   P      LDH VL VGYGS G        + +W++KNSW  +WGE+GY K+   R N CG+
Sbjct:  112 RTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDC-------AGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEARD-NTCRFNSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYYTGVYYEPSCSSSQLDHAVLAVGYGSEG-------GQDFWLVKNSWATSWGESGYIKMARNRNNNCGI 313          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 8.241e-41
Identity = 93/223 (41.70%), Postives = 132/223 (59.19%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNVCGVDSMVS 692
            R  GAV  VK+QG+CGSCW+FS   A+EG + + TG L +LSEQ+L+DCD         + ++GCNGGLM+ AFEYI+K GG+ +E+DYPY+  + G+C+  K +     ++    + +++++     + H PL+V I+A     Q Y GGV     CG  LDHGV  VGYGSS       K   Y I+KNSWG  WGE GY ++         +CG++ M S
Sbjct:  145 RKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCD--------TTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYS-MEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVAIDASGREFQFYSGGV-FDGRCGVDLDHGVAAVGYGSS-------KGSDYIIVKNSWGPKWGEKGYIRLKRNTGKPEGLCGINKMAS 350          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 8.241e-41
Identity = 91/223 (40.81%), Postives = 127/223 (56.95%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV----CGVDSMVS 692
            R+ GAV  VK+QG CGSCW+FSA   +E  + L TGE+++LSEQ+LV+C            +SGCNGGLM+ AF++I+K GG++ E DYPY   D G C  ++      ++  F  +  ++++     V H P++V I A     Q Y  GV     CG  LDHGV+ VGYG+          K YWI++NSWG  WGE+GY ++    NV    CG+  M S
Sbjct:  148 REKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVEC-------STNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVD-GKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGR-CGTSLDHGVVAVGYGTD-------NGKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMMAS 354          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 1.076e-40
Identity = 95/223 (42.60%), Postives = 132/223 (59.19%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 692
            R+ G V+ VKDQG CGSCW+FS TG+LE A+  +TG+ VSLSEQQLVDC    +       + GC+GGL + AFEYI   GG++ E+ YPYTG + G C +    +   V    N ++ + DE + A  LV+  P++V    +   + Y  GV     CG     ++H VL VGYG            PYW+IKNSWG +WG+NGY+K+ MG+N+CG+ +  S
Sbjct:  152 REDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYN-------NFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVN-GICHYKPENVGVKVLDSVNITLGAEDELKNAVGLVR--PVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGV-------PYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCAS 357          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.406e-40
Identity = 93/220 (42.27%), Postives = 126/220 (57.27%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            R+ G VT VK QG+CG+CW+FSA GALE    L TG+LVSLS Q LVDC      E+YG  + GCNGG M  AF+YI+   G++ E  YPY  TD   C++D    AA  S ++ +    ED +   +   GP+ VG++A       Y  GV     C + ++HGVL++GYG           K YW++KNSWG N+GE GY ++   + N CG+ S  S
Sbjct:  122 REKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCS-----EKYG--NKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATD-QKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGD-------LNGKEYWLVKNSWGSNFGEQGYIRMARNKGNHCGIASYPS 326          
The following BLAST results are available for this feature:
BLAST of CF832441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
CYSP3_DICDI3.699e-4141.33Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CYSP2_MAIZE3.699e-4143.05Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CYSP1_ORYSJ3.699e-4143.11Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CATL1_HUMAN3.699e-4144.09Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
XCP1_ARATH4.832e-4143.56Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CYSP1_HOMAM6.310e-4144.24Digestive cysteine proteinase 1 OS=Homarus america... [more]
XCP2_ARATH8.241e-4141.70Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
ORYB_ORYSJ8.241e-4140.81Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
ORYC_ORYSJ1.076e-4042.60Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CATS_SAIBB1.406e-4042.27Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832441 ID=CF832441; Name=CF832441; organism=Citrus sinensis; type=EST; length=853bp
CTCCTTCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGTTCGTGAT
CACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTG
GTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGG
GCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAG
TGTGATCCAGAGGAATATGGTTCATGTGACTCTGGGTGCAATGGTGGGCT
AATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAG
AGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGAC
AAAAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGA
TGAAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGG
GTATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCA
TACATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGG
ATCCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCA
TAAAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATC
TGCATGGGTCGCAATGTCTGTGGGGTCGACTCCATGGTCTCATCTGTAGC
TGCTATCCATACAACCTCAAGCTAGACATTATGGAGGTTGTGCTAGGCAA
GTGGAGCTTCTGTACCTAGATATTATAGGATATCCTTTTAAATATCCGTC
TGCAATTATAACGATGCCTACATGCCTGGGCTGAGGCATGAACTTTCTAT
GCT
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