CF832442

Overview
NameCF832442
Unique NameCF832442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.013e-15
Identity = 45/138 (32.61%), Postives = 71/138 (51.45%), Query Frame = -1
Query:  269 EKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 679
            E DYPY   +G  C+ + +K    V   +  I+  E+++   L   GP+ V I+A  +  Y  G+   Y     L+H VL+VGY      P       +WI+KN+WG +WGE GY+++    N CG+ + + S A I+
Sbjct:  196 ESDYPYEANNG-DCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVNYKRGIM-KYCANHGLNHAVLLVGYAVENGVP-------FWILKNTWGADWGEQGYFRVQQNINACGIQNELPSSAEIY 324          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.013e-15
Identity = 44/138 (31.88%), Postives = 73/138 (52.90%), Query Frame = -1
Query:  269 EKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 679
            E DYPY   D  +C+ + +K    V + +  I+  E+++   L   GP+ + I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+G++++    N CG+ + ++S A I+
Sbjct:  195 ESDYPYEA-DNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVIY 323          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.013e-15
Identity = 49/135 (36.30%), Postives = 67/135 (49.63%), Query Frame = -1
Query:  287 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWM--QTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 679
            E+ YPY G D  +C +     AA  + F  +   E  +   +   GP++V I+A     Q Y  G+     C  K LDHGVL+VGYG  G          +WI+KNSWG  WG NGY K+   + N CG+ +  S
Sbjct:  199 EESYPYLGRDTETCNYKPECSAANDTGFVDLPQREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTD----SNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAAS 329          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.159e-15
Identity = 46/135 (34.07%), Postives = 69/135 (51.11%), Query Frame = -1
Query:  287 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 679
            E+ YPY       CKF +  +AA ++++  I + ++    N +   P++V I+A     Q Y  GV     C    LDHGVL VG G+          + Y+I+KNSWG +WG NGY  +   + N CG+ +M S
Sbjct:  206 EEQYPYEMKVNDECKFQEGSVAAKITSYKEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSEDLDHGVLAVGMGTDN-------GEDYYIVKNSWGPSWGLNGYIHMARNKDNNCGISTMAS 333          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.159e-15
Identity = 45/140 (32.14%), Postives = 75/140 (53.57%), Query Frame = -1
Query:  272 EKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 679
            E DYP+ G +   C  D+ +  + + V  +  +  +E+++   L   GP+ + I+A  +  Y  GV  SC       L+H VL+VGYG     P       YW+ KN+WG++WGENGY+++    N CG+ + ++S A +
Sbjct:  227 ELDYPFVGRNR-RCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYRGVISSCE---NNGLNHAVLLVGYGVENGVP-------YWVFKNTWGDDWGENGYFRVRQNVNACGMVNDLASTAVL 355          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.159e-15
Identity = 49/136 (36.03%), Postives = 69/136 (50.74%), Query Frame = -1
Query:  287 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAVW--MQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 679
            E+ YPY   D   CK+      A  + F+V++  +++     V   GP++V ++A     Q Y  G+     C  K LDHGVL+VGYG  G          YW++KNSWG  WG NGY KI   + N CG+ +  S
Sbjct:  199 EESYPYVAVDE-ICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEG---ANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAAS 330          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14
Identity = 47/138 (34.06%), Postives = 74/138 (53.62%), Query Frame = -1
Query:  272 REKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 682
            +E DY Y   +   C     K A  V N +  +  +E+++   L   GP+A+ ++AV +  Y GG+   +     L+H VL+VGYG            PYWIIKNSWG ++GE+GY ++  G N CG+ + ++S A +
Sbjct:  208 QEFDYSYKA-ERQPCALKPHKFATGVRNCYRYVILNEERLEDLLRYVGPIAIAVDAVDLTDYYGGI-VSFCENNGLNHAVLLVGYGVEN-------NVPYWIIKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQV 336          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14
Identity = 44/138 (31.88%), Postives = 72/138 (52.17%), Query Frame = -1
Query:  269 EKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 679
            E DYPY   D  +C+ + +K    V + +  I+  E+++   L   GP+ + I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE G++++    N CG+ + ++S A I+
Sbjct:  195 ESDYPYEA-DNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGEEGFFRVQQNINACGMRNELASTAVIY 323          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14
Identity = 46/138 (33.33%), Postives = 70/138 (50.72%), Query Frame = -1
Query:  269 EKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 679
            E DYPY   +G  C+ + +K    V   +  +   E+++   L   GPL V I+A  +  Y  GV   Y     L+H VL+VGY      P       +WI+KN+WG +WGE GY+++    N CG+ + + S A I+
Sbjct:  196 ENDYPYEANNG-DCRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAIDASDIVNYKRGV-IRYCANHGLNHAVLLVGYAVENGVP-------FWILKNTWGTDWGEQGYFRVQQNINACGIQNELPSSAEIY 324          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14
Identity = 46/135 (34.07%), Postives = 71/135 (52.59%), Query Frame = -1
Query:  287 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQTYI--GGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 679
            E  YPY   +G  C++D  K AA  S ++ +    ED +   +   GP++V I+A     ++   GV     C + ++HGVL+VGYG+          K YW++KNSWG N+G+ GY ++     N CG+ S  S
Sbjct:  201 EASYPYKAMNG-KCRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVLVVGYGN-------LNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPS 327          
The following BLAST results are available for this feature:
BLAST of CF832442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
CATV_NPVCF7.013e-1532.61Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATV_NPVAC7.013e-1531.88Viral cathepsin OS=Autographa californica nuclear ... [more]
CATL1_CANFA7.013e-1536.30Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CYSP3_DICDI9.159e-1534.07Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CATV_NPVLD9.159e-1532.14Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATL2_HUMAN9.159e-1536.03Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CATV_NPVSE1.196e-1434.06Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]
CATV_NPVRO1.196e-1431.88Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_NPVCD1.196e-1433.33Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CATS_CANFA1.196e-1434.07Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832442 ID=CF832442; Name=CF832442; organism=Citrus sinensis; type=EST; length=682bp
TTTTTTTTTTTTTTTTTAAAAAAAGAAAATATTAATACCATCTTCAATAA
CAATTCTGTAGCATGGTTAACTATAAAATAGATAAATATTACATTCTGAC
ATGACATATGCTTAAATATTACAAGAGCATAGAAAGTTCATGCCTCAGCC
CAGGCATGTAGGCATCGTTATAATTGCAGACGGATATTTAAAAGGATATC
CTATAATATCTAGGTACAGAAGCTCCACTTGCCTAGCACAACCTCCATAA
TGTCTAGCTTGAGGTTGTATGGATAGCAGCTACAGATGAGACCATGGAGT
CGACCCCACAGACATTGCGACCCATGCAGATCTTATAATATCCATTCTCT
CCCCAGTTCTCTCCCCAGGAGTTCTTTATGATCCAGTAAGGCTTCTCCTT
GAATCTGATCGGGGCGAAACCTGAGGATCCATAGCCCACGATAAGCACTC
CATGATCCAAATACTTCCCGCAAATGTATGGGCATGAAACTCCTCCAATA
TATGTTTGCATCCAAACGGCATTGATACCCACTGCCAGAGGGCCATGTTT
CACCAAATTTGCAGCCATTTGATCTTCATCAGAGGAAATAACACTGAAAT
TAGATACAGCTGCAGCAATTTTGCTTTTGTCAAATTTGCAGGAACCACCG
TCGGTCCCAGTGTAAGGGTAGTCCTTCTCTCG
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