CF832445

Overview
NameCF832445
Unique NameCF832445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL2_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibberella zeae GN=CYP8 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15
Identity = 56/153 (36.60%), Postives = 80/153 (52.29%), Query Frame = -3
Query:  202 GRIVMGLFGKAVPKTAENFRALC-TGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE-AEGRQNGTPKSKVVIAD 651
            G + + L+ +  PK   NF  L  TG           +YKG  FHR IP+FM+Q            +S++G+ F DE +  + H G G LSMAN G +TN SQFF     T  LD +H VFGKV+  ++V+ K+E      +  P +K++I D
Sbjct:  332 GDLTIELYPEFAPKAVWNFIKLSQTG-----------YYKGVAFHRNIPNFMIQGGDPSGSGRGG-QSVWGKYFDDEFDGPMTHNGRGTLSMANKGKNTNSSQFFFAYKPTPHLDRKHTVFGKVVENINVLSKMENVPTDGSNRPLNKILIKD 472          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: SDC10_DANRE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Danio rerio GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15
Identity = 49/124 (39.52%), Postives = 65/124 (52.42%), Query Frame = -3
Query:  286 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKV 654
            AG I + L+ K  PK   NF  LC             +Y G+ FHR++P F++Q            ESIYG  F DE + +L+    GL++MANAGP  NGSQFF T      L+ +H +FGKV
Sbjct:   21 AGDIDIELWSKETPKACRNFVQLCMEG----------YYDGTIFHRMVPEFIVQGGDPTGTGTGG-ESIYGRPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: SDC10_MOUSE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mus musculus GN=Sdccag10 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15
Identity = 48/124 (38.71%), Postives = 64/124 (51.61%), Query Frame = -3
Query:  286 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKV 654
            AG I + L+ K  PK   NF  LC             +Y  + FHR++P F++Q            ESIYG  F DE + +L+    GL++MANAGP  NGSQFF T      L+ +H +FGKV
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: SDC10_RAT (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Rattus norvegicus GN=Sdccag10 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 47/124 (37.90%), Postives = 64/124 (51.61%), Query Frame = -3
Query:  286 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKV 654
            AG I + L+ K  PK   NF  LC             +Y  + FHR++P F++Q            ES+YG  F DE + +L+    GL++MANAGP  NGSQFF T      L+ +H +FGKV
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESVYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: SDC10_BOVIN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bos taurus GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 48/124 (38.71%), Postives = 64/124 (51.61%), Query Frame = -3
Query:  286 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKV 654
            AG I + L+ K  PK   NF  LC             +Y  + FHR++P F++Q            ESIYG  F DE + +L+    GL++MANAGP  NGSQFF T      L+ +H +FGKV
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESIYGVPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: SDC10_XENLA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xenopus laevis GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 47/134 (35.07%), Postives = 69/134 (51.49%), Query Frame = -3
Query:  256 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKV 654
            AG I + L+ K  PK   NF  LC             +Y  + FHR++P F++Q            ES++G+ F DE + +L+    GL++MANAGP  NGSQFF T      L+ +H +FGKV    D ++ +
Sbjct:   21 AGEIDIELWSKEAPKACRNFVQLCLEG----------YYDNTIFHRVVPEFIIQGGDPTGTGTGG-ESVFGKPFRDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTG--DTIYNI 141          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPI1_STAS1 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1821 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 58/157 (36.94%), Postives = 68/157 (43.31%), Query Frame = -3
Query:  265 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFIT----------------------------TVTTSWLDGRHVVFGKVLSGMDVV 651
            G +   L     PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYGE F DE  K      G LSMANAGP TNGSQFFI                             T  T WLD +H VFG+++ G D +
Sbjct:   25 GDMTFKLLPDVAPKTVENFVTHA-------KNG---YYNGVTFHRVINDFMVQGGDPTATGMGG-ESIYGEPFEDEFSKEAFNIYGALSMANAGPHTNGSQFFIVQMNEVPESMLSQLADGGWPEPIVKAYAETGGTPWLDQKHTVFGQLIEGKDTL 170          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL2_USTMA (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Ustilago maydis GN=CYP8 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.887e-14
Identity = 61/149 (40.94%), Postives = 74/149 (49.66%), Query Frame = -3
Query:  202 GKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFK---LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMD--VVFKVEAEGRQNGT--PKSKVVIAD 627
            GKA PKT  NF  LC       K GK   Y  + FHR IP FM+Q             SI+   F DE  +    KH   G+LSMAN G DTN SQFFIT      LDG+H VFG+++ G     + K+E    + GT  P  K+ I D
Sbjct:  311 GKA-PKTCFNFLQLC-------KHGK---YDDTLFHRNIPGFMIQGGDPTGTGRGG-SSIWNSNFRDEFNEPGAFKHDTRGVLSMANKGKDTNASQFFITYRGVPHLDGKHTVFGRLVDGDKDATLTKMEQVPSEQGTDRPLKKIQIQD 447          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL2_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neurospora crassa GN=cyp-8 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 59/169 (34.91%), Postives = 80/169 (47.34%), Query Frame = -3
Query:  202 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGT--PKSKVVIAD 699
            I NK Y  +E      G + + L  +  PK   NF  L   EKG        +Y+   FHR I +FM+Q             SI+G+ F DE      H+  G++SMAN G +TN SQFFIT    S LD +H +F KV+ G D           +G+  P +K+VI D
Sbjct:  326 IKNKGYVRMETN---LGPLTLELLPEFAPKAVWNFLRL--SEKG--------YYRDVAFHRSIRNFMIQGGDPSGTGRGG-SSIWGKNFEDEFEGPNTHSARGIVSMANKGKNTNSSQFFITYRPASHLDRKHTIFAKVIEGQDTTLTAMENVATDGSDRPLNKIVIKD 480          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: SDC10_PONAB (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Pongo abelii GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.399e-14
Identity = 47/124 (37.90%), Postives = 63/124 (50.81%), Query Frame = -3
Query:  286 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKV 654
            AG I + L+ K  PK   NF  LC             +Y  + FHR++P F++Q            ESIYG  F DE + +L+    GL++MANAG   NGSQFF T      L+ +H +FGKV
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
The following BLAST results are available for this feature:
BLAST of CF832445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
PPIL2_GIBZE1.531e-1536.60Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibb... [more]
SDC10_DANRE4.453e-1539.52Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Da... [more]
SDC10_MOUSE9.921e-1538.71Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mu... [more]
SDC10_RAT1.296e-1437.90Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ra... [more]
SDC10_BOVIN1.296e-1438.71Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bo... [more]
SDC10_XENLA1.692e-1435.07Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xe... [more]
PPI1_STAS12.210e-1436.94Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIL2_USTMA2.887e-1440.94Peptidyl-prolyl cis-trans isomerase-like 2 OS=Usti... [more]
PPIL2_NEUCR3.770e-1434.91Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neur... [more]
SDC10_PONAB8.399e-1437.90Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Po... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832445 ID=CF832445; Name=CF832445; organism=Citrus sinensis; type=EST; length=716bp
TTTTTTTTTATTTTNAGAAAAGGATCCCCTTAAAATGACCCCTTTACTTG
GCAAACAACCTAGGACATTTTAAAATGTCTCCTTTTTGATAAATAGGAAA
ATTAAGAGTATCTTCATGAAGGTTGAAAAGACGAAAGGATTAAAAAGGGG
TATACCCTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCACCGC
TGTCTGCAATGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCCTTCA
GCTTCAACCTTGAAAACTACATCCATCCCCGATAGCACCTTTCCAAATAC
AACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAGAATT
GTGAACCATTGGTGTCTGGCCCAGCATTTGCCATTGACAAAAGCCCTGGG
CCGGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCATAAAT
TGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGAAGCA
TAAAGCTGGGAATAATCCTATGAAACGTACTTCCCTTGTAGTGGAGTGGC
TTCCCACTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGAAATT
TTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATACGTC
CGGCAGGTTTTCCGGCAATCTCAACGTCAAAGTAAACTTTGTTTGTGATT
TCTTTCAAATTCTGAT
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