CF832446

Overview
NameCF832446
Unique NameCF832446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.071e-42
Identity = 91/162 (56.17%), Postives = 108/162 (66.67%), Query Frame = 2
Query:  113 AKKSDQNLKEITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            AKK+  N      +V  D++I  KPAGRI M L    VP TAENFR LCT EKG G       +KGS+FHRIIP FM Q            +SIYG+KF DENF LKHTGPGLLSMAN+GP+TNGSQFF+T   T WLDG+HVVFG+V   +DV+ ++EA G
Sbjct:  133 AKKARSN-----PQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEARG 282          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.071e-42
Identity = 86/149 (57.72%), Postives = 104/149 (69.80%), Query Frame = 2
Query:  152 KVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            +V  D++I  KPAGRI M L    VP TAENFR LCT EKG G       +KGS+FHRIIP FM Q            +SIYG+KF DENF LKHTGPGLLSMAN+GP+TNGSQFF+T   T WLDG+HVVFG++   +DV+ ++EA+G
Sbjct:  141 QVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEITDGLDVLRQIEAQG 282          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.239e-42
Identity = 87/148 (58.78%), Postives = 100/148 (67.57%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            V FDV   G+  G+I   L+   VPKTAENFRALCTGEKG G       YKGS FHR+IP FMLQ            +SIYG KF DENF  +H  PGLLSMANAGP+TNGSQFFITTV   WLDG+HVVFG+V   +D+V K+E+ G
Sbjct:    4 VYFDVSADGQKLGKITFKLYDDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDIVKKIESFG 144          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 6.842e-42
Identity = 91/152 (59.87%), Postives = 103/152 (67.76%), Query Frame = 2
Query:  143 ITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGK-SGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAE 595
            I  +V FD+++ G   GRIV+ LF   VPKTAENFRALCTGEKGIGK S  PLHYKGS FHRII  FM Q            ESIYG  FPDE+F  KH   GLLSMAN GP+T  SQFFITT  T  LDG+HVVFG+V+S  +VV  +E E
Sbjct:    2 INPRVFFDIDVDGNRIGRIVIELFADQVPKTAENFRALCTGEKGIGKVSNMPLHYKGSIFHRIIKGFMCQGGDFTHRTGKGGESIYGANFPDESFSRKHDTHGLLSMANRGPNTQTSQFFITTRPTPHLDGKHVVFGRVVSGYNVVEMMENE 153          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIA_STRCH (Peptidyl-prolyl cis-trans isomerase A OS=Streptomyces chrysomallus GN=ppiA PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.524e-41
Identity = 92/154 (59.74%), Postives = 103/154 (66.88%), Query Frame = 2
Query:  143 ITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL--SVMDVVYKVEAEG 598
            +T KV FD+ I   PAGRI   LF   VPKTAENFRAL TGEKG G       Y GS+FHR+I  FMLQ            +SIYGEKF DENF+LKH   GLLSMANAG +TNGSQFFITTV T WLDG+HVVFG+V     M +V K+EA G
Sbjct:    1 MTTKVYFDITIDDAPAGRITFNLFDDVVPKTAENFRALATGEKGFG-------YAGSSFHRVITDFMLQGGDFTRGDGTGGKSIYGEKFADENFQLKHDRVGLLSMANAGKNTNGSQFFITTVLTPWLDGKHVVFGEVADDDSMALVRKIEALG 147          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPID_CANAL (Peptidyl-prolyl cis-trans isomerase D OS=Candida albicans GN=CPR6 PE=3 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 4.435e-41
Identity = 88/149 (59.06%), Postives = 102/149 (68.46%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIG-KSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXX---ESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            V FD+   GKP GR+V  L+   VPKTA NFR+LCTG+KGI  KSGKPL YK S FHR+I  FM Q               ESIYGEKF DENFKL H  P LLSMAN+GP+TNGSQFFITTV T  LDG+HVVFG+V+    +V ++E
Sbjct:    6 VYFDISCNGKPKGRVVFKLYDDVVPKTAANFRSLCTGDKGISPKSGKPLSYKDSIFHRVIKDFMCQGGDFTAPSDHLGTGGESIYGEKFEDENFKLNHNKPFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVIEGKSIVRQLE 154          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.290e-40
Identity = 88/150 (58.67%), Postives = 103/150 (68.67%), Query Frame = 2
Query:  149 NKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            ++V  D++I    AGRI + L G  VPKTAENFRALCTGE G G       YK S+FHRIIP FM Q            +SIYG KF DENF LKHTGPG LSMANAG +TNGSQFFI T  T+WLDG+HVVFG+V+S M+VV ++E  G
Sbjct:  155 SRVYLDIQIGNTLAGRIEIELRGDVVPKTAENFRALCTGEAGFG-------YKKSSFHRIIPQFMCQGGDFTKGNGTGGKSIYGGKFEDENFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHVVFGQVVSGMNVVREMERCG 297          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIH_NEUCR (Peptidyl-prolyl cis-trans isomerase H OS=Neurospora crassa GN=cyp-3 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.685e-40
Identity = 88/146 (60.27%), Postives = 99/146 (67.81%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEK-FPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            V FD+ + G+P GRI   LF   VP+TAENFR  CTGE      G+P  YKGS FHRIIP+FM Q              IYG K F DENF LKH  PGLLSMANAGP+TNGSQFFITTV T +LDG+HVVFGKV+  MDVV K+E
Sbjct:   14 VFFDITLGGEPLGRITFELFKDVVPRTAENFRQFCTGESK-NNLGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIYGTKSFADENFLLKHDTPGLLSMANAGPNTNGSQFFITTVPTPFLDGKHVVFGKVVDGMDVVKKME 158          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYPC_YEAST (Peptidyl-prolyl cis-trans isomerase C, mitochondrial OS=Saccharomyces cerevisiae GN=CPR3 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.201e-40
Identity = 87/149 (58.39%), Postives = 97/149 (65.10%), Query Frame = 2
Query:  152 KVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            KV FD  + G   GRI   L+   VPKTAENFRALCTGEKG G       YKG  FHRIIP FM+Q            +SIYG KF DENF  KH   GLLSMANAGP+TNGSQFFITTV   WLDG+HVVFG+V   MD+V  +E+ G
Sbjct:   23 KVFFDPAVNGTKIGRIEFELYDNVVPKTAENFRALCTGEKGWG-------YKGVPFHRIIPDFMIQGGDTDLTNGFGGKSIYGSKFADENFVKKHDKAGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTKGMDIVKAIESYG 164          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIH_GIBZE (Peptidyl-prolyl cis-trans isomerase H OS=Gibberella zeae GN=CYP3 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 8.364e-40
Identity = 89/147 (60.54%), Postives = 98/147 (66.67%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEK-FPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEA 592
            V FD+ I G+P GRI   LF   VPKTAENFR  CTGE      G+P  YKGS FHRIIP+FM Q              I+G K F DENF LKH  PGLLSMANAGP+TNGSQFFITTV T +LD +HVVFGKV   MDVV K+EA
Sbjct:   14 VFFDITIGGEPLGRITFELFKDVVPKTAENFRQFCTGESKT-PVGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIWGFKSFEDENFTLKHDQPGLLSMANAGPNTNGSQFFITTVPTPFLDNKHVVFGKVFEGMDVVKKMEA 159          
The following BLAST results are available for this feature:
BLAST of CF832446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIE_PONAB3.071e-4256.17Peptidyl-prolyl cis-trans isomerase E OS=Pongo abe... [more]
PPIE_BOVIN3.071e-4257.72Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]
PPIA_CANAL5.239e-4258.78Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
CYP11_RHIOR6.842e-4259.87Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]
PPIA_STRCH1.524e-4159.74Peptidyl-prolyl cis-trans isomerase A OS=Streptomy... [more]
PPID_CANAL4.435e-4159.06Peptidyl-prolyl cis-trans isomerase D OS=Candida a... [more]
PPIE_RHIOR1.290e-4058.67Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
PPIH_NEUCR1.685e-4060.27Peptidyl-prolyl cis-trans isomerase H OS=Neurospor... [more]
CYPC_YEAST2.201e-4058.39Peptidyl-prolyl cis-trans isomerase C, mitochondri... [more]
PPIH_GIBZE8.364e-4060.54Peptidyl-prolyl cis-trans isomerase H OS=Gibberell... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832446 ID=CF832446; Name=CF832446; organism=Citrus sinensis; type=EST; length=599bp
GCCGGTGACTGCAGAATGAGAAACAACGAAGTGATATATGGCTTCAACAA
ATTTGCTTCCACTCACGATGCTATGGGCTGTTATCCTGTTGGCCACTTTC
TCTATAATTCTGGCGAAAAAATCGGATCAGAATTTGAAAGAAATCACAAA
CAAAGTTGACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTG
TAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGA
GCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTCCA
CTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCAAG
GAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGA
GAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGGCT
TTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTTCA
TTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTGGA
AAGGTGCTATCGGTGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGGA
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