CF832446

Overview
NameCF832446
Unique NameCF832446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIG_MOUSE (Peptidyl-prolyl cis-trans isomerase G OS=Mus musculus GN=Ppig PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.208e-38
Identity = 82/144 (56.94%), Postives = 95/144 (65.97%), Query Frame = 2
Query:  161 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSG-KPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            FD+ I  +PAGR+V  LF    PKT ENFR LCTGEKG GKS  KPLHYK   FHR++  FM+Q            ESIYG  F DE+F +KH    LLSMAN G DTNGSQFFITT  T  LDG HVVFG+V+S  +VV ++E
Sbjct:   12 FDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIE 155          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIG_HUMAN (Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.208e-38
Identity = 82/144 (56.94%), Postives = 95/144 (65.97%), Query Frame = 2
Query:  161 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSG-KPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            FD+ I  +PAGR+V  LF    PKT ENFR LCTGEKG GKS  KPLHYK   FHR++  FM+Q            ESIYG  F DE+F +KH    LLSMAN G DTNGSQFFITT  T  LDG HVVFG+V+S  +VV ++E
Sbjct:   12 FDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIE 155          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PAL4B_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4B OS=Homo sapiens GN=PPIAL4B PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.577e-38
Identity = 83/152 (54.61%), Postives = 97/152 (63.82%), Query Frame = 2
Query:  143 ITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            + + V FD+ + GKP GRI + LF   + KTAENFRAL TGEKG         YKGS FHRIIP FM Q            +SIYGEKF DEN   KHTG G+LSMANAGP+TNGSQFFI    T WLDG+HV FGKV   +++V  +E  G
Sbjct:    2 VNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGF-------RYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFG 146          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.690e-38
Identity = 84/154 (54.55%), Postives = 98/154 (63.64%), Query Frame = 2
Query:  137 KEITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            K+    V FDV   G+P GRI+M LF   VP+TAENFRALCTGEKG G       +K S FHR++P F+ Q            +SIYG+KF DENF LKHTGPGLLSMAN G +TN SQFFIT      LD +HVVFG V   MD V K+E+ G
Sbjct: 2889 KDTNPVVFFDVCADGEPLGRIIMELFSNIVPQTAENFRALCTGEKGFG-------FKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGDKFDDENFDLKHTGPGLLSMANYGQNTNSSQFFITLKKAEHLDFKHVVFGFVKDGMDTVRKIESFG 3035          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPID_CRYNE (Peptidyl-prolyl cis-trans isomerase D OS=Cryptococcus neoformans GN=CPR6 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.690e-38
Identity = 82/143 (57.34%), Postives = 97/143 (67.83%), Query Frame = 2
Query:  161 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            FD+ IA +PAGR+   LF   VPKTA NF+ LC G+K   ++G  L Y GS+FHR I  FMLQ            ESIYGEKF DENF+LKH  P LLSMANAGP TNGSQFFITTV T  LDG+HVVFG+V+    +V ++E
Sbjct:    8 FDITIANEPAGRLTFELFDDVVPKTANNFKHLCIGDK-TNEAGVKLAYAGSSFHRCIKGFMLQGGDFTRGDGTGGESIYGEKFEDENFELKHDKPMLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGRVIYNRSLVRRIE 149          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPID_CANGA (Peptidyl-prolyl cis-trans isomerase D OS=Candida glabrata GN=CPR6 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.690e-38
Identity = 83/150 (55.33%), Postives = 98/150 (65.33%), Query Frame = 2
Query:  152 KVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGK--PLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAE 595
            K  FD+ I G P GRIV  L+   VPKTAENF  LC G+ G+ KS    PL YKGS FHR+I  FM+Q            ESIYGEKF DENF++KH  P LLSMANAGP+TNGSQ FIT V T  LDG+HVVFG+V+    +V  +E +
Sbjct:    5 KAYFDISIGGTPKGRIVFELYKDVVPKTAENFLKLCEGKSGMAKSKPDVPLSYKGSIFHRVIKDFMIQFGDFTNFDGTGGESIYGEKFEDENFEIKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIEGKRLVRLIEKQ 154          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIE_SCHJA (Peptidyl-prolyl cis-trans isomerase E (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.514e-38
Identity = 83/161 (51.55%), Postives = 102/161 (63.35%), Query Frame = 2
Query:  116 KKSDQNLKEITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            KK  +NL     +V FD+ I     GRIVM L    VP+TAENFRALCTG++G G       Y    FHR+IP FM Q            +SIYG KF DENF+L+H G G+LSMAN+GP+TNGSQFFI T    WLDG+HVVFG+V+   +VV K+E+ G
Sbjct:   11 KKQKRNLP----RVFFDIRIGNADRGRIVMELRSDIVPRTAENFRALCTGDRGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVG 160          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: RBP2_BOVIN (E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos taurus GN=RANBP2 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 5.994e-38
Identity = 85/154 (55.19%), Postives = 95/154 (61.69%), Query Frame = 2
Query:  137 KEITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            KE    V FD+    +P GRI M LF   VPKTAENFRALCTGEKG G       +K S FHR+IP F+ Q             SIYG+KF DENF +KHTGPGLLSMAN G DTN SQFFIT      LD +HVVFG V   MD V K+E+ G
Sbjct:  921 KETNPVVFFDICADDEPLGRITMELFSNIVPKTAENFRALCTGEKGFG-------FKSSIFHRVIPDFVCQGGDITKHDGTGGRSIYGDKFEDENFDVKHTGPGLLSMANRGQDTNNSQFFITLKKAERLDFKHVVFGFVKDGMDTVKKIESFG 1067          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.022e-37
Identity = 83/149 (55.70%), Postives = 96/149 (64.43%), Query Frame = 2
Query:  152 KVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            +V FD+ I G  AGRIVM L    VPKTAENFR LCT E+G G       YKG +FHR+IP FM Q            +SIYG+KF DENF LKH   G LSMAN+G +TNGSQFFI T  T WLD +HVVFG V+S  +VV K+E  G
Sbjct:  140 QVFFDIRIGGNDAGRIVMLLRADVVPKTAENFRQLCTHEQGYG-------YKGCSFHRVIPEFMCQGGDFTNNNGTGGKSIYGKKFNDENFNLKHNSFGTLSMANSGANTNGSQFFICTTKTDWLDNKHVVFGHVISGAEVVRKMERCG 281          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYP1_BRUMA (Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia malayi GN=CYP-1 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.022e-37
Identity = 83/152 (54.61%), Postives = 98/152 (64.47%), Query Frame = 2
Query:  137 KEITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGK-SGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            K+   +V  DV I G  AGRIVM L+    P+T  NF  LCTG  G GK SGKPLHYKGSTFHR+I +FM+Q            ESIYG  F DE F +KH  P ++SMAN GP+TNGSQFFITT     L+  HVVFGKV+S  +VV K+E
Sbjct:    3 KKDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIE 154          
The following BLAST results are available for this feature:
BLAST of CF832446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIG_MOUSE1.208e-3856.94Peptidyl-prolyl cis-trans isomerase G OS=Mus muscu... [more]
PPIG_HUMAN1.208e-3856.94Peptidyl-prolyl cis-trans isomerase G OS=Homo sapi... [more]
PAL4B_HUMAN1.577e-3854.61Peptidylprolyl cis-trans isomerase A-like 4B OS=Ho... [more]
RBP2_MOUSE2.690e-3854.55E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=R... [more]
PPID_CRYNE2.690e-3857.34Peptidyl-prolyl cis-trans isomerase D OS=Cryptococ... [more]
PPID_CANGA2.690e-3855.33Peptidyl-prolyl cis-trans isomerase D OS=Candida g... [more]
PPIE_SCHJA3.514e-3851.55Peptidyl-prolyl cis-trans isomerase E (Fragment) O... [more]
RBP2_BOVIN5.994e-3855.19E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos ta... [more]
PPIE_DROME1.022e-3755.70Peptidyl-prolyl cis-trans isomerase E OS=Drosophil... [more]
CYP1_BRUMA1.022e-3754.61Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia ma... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832446 ID=CF832446; Name=CF832446; organism=Citrus sinensis; type=EST; length=599bp
GCCGGTGACTGCAGAATGAGAAACAACGAAGTGATATATGGCTTCAACAA
ATTTGCTTCCACTCACGATGCTATGGGCTGTTATCCTGTTGGCCACTTTC
TCTATAATTCTGGCGAAAAAATCGGATCAGAATTTGAAAGAAATCACAAA
CAAAGTTGACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTG
TAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGA
GCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTCCA
CTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCAAG
GAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGA
GAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGGCT
TTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTTCA
TTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTGGA
AAGGTGCTATCGGTGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGGA
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