CF832446

Overview
NameCF832446
Unique NameCF832446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYPD_YEAST (Peptidyl-prolyl cis-trans isomerase D OS=Saccharomyces cerevisiae GN=CPR5 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.610e-36
Identity = 82/161 (50.93%), Postives = 100/161 (62.11%), Query Frame = 2
Query:  107 ILAKKSDQNLKEITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            I AK+      EIT+KV FD+    K  GRIVMGL+G   P+T ENF  L      I +  K + Y  S FHR+IP+FM+Q            +SI+G  F DENF +KH  PG LSMAN G +TNGSQFFITTV   WLDG+HVVFG+VL  MDVV+ +E
Sbjct:   20 IFAKEDTAEDPEITHKVYFDINHGDKQIGRIVMGLYGLTTPQTVENFYQLT-----ISRDPK-MGYLNSIFHRVIPNFMIQGGDFTHRSGIGGKSIFGNTFKDENFDVKHDKPGRLSMANRGKNTNGSQFFITTVPCPWLDGKHVVFGEVLDGMDVVHYIE 174          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYPH_UROFA (Peptidyl-prolyl cis-trans isomerase OS=Uromyces fabae GN=PIG28 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 9.569e-36
Identity = 77/141 (54.61%), Postives = 88/141 (62.41%), Query Frame = 2
Query:  161 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYK 583
            FDV   GKP GRIV  L+   VP+T  NFR LC    G G       +K S FHR+IP FM+Q            ESIYG+KF DENF+ KH   G+LSMANAGP+TNGSQFFIT   T WLDG+HVVFGKV+   D V K
Sbjct:    6 FDVSSNGKPLGRIVFELYDDVVPRTTNNFRQLCLNPPGKG-------FKHSIFHRVIPDFMIQGGDFTNGNGTGGESIYGKKFEDENFQKKHVERGMLSMANAGPNTNGSQFFITVTKTPWLDGKHVVFGKVIEGYDQVVK 139          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPID_SCHPO (40 kDa peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=wis2 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.632e-35
Identity = 80/143 (55.94%), Postives = 92/143 (64.34%), Query Frame = 2
Query:  161 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            F + I GK    I   LF   VPKT +NF +LC G +   K G+ L YKGS FHR+I +FMLQ            ESIYGEKF DENF+LKH  P LLSMANAGP+TNGSQFFITTV T  LDG+HVVFGKV+     V  +E
Sbjct:    7 FKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFE---KDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIE 146          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIH_ASPFU (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus fumigatus GN=cyp3 PE=3 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 4.749e-35
Identity = 77/146 (52.74%), Postives = 93/146 (63.70%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGE-KFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            V FD+ + G P GRI M LF    P+TAENFR  CTGE      GKP  YK S FHR+I  FM+Q             +IYG  KF DENF LKH   G+LSMAN+GP+TNG QFFITT  T +L+G+HVVFG+V+  MD+V  +E
Sbjct:   16 VFFDIALGGVPLGRIKMELFADVTPRTAENFRRFCTGESK-NSQGKPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFADENFVLKHDRAGVLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVVDGMDIVRMIE 160          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPID_USTMA (Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.203e-35
Identity = 76/140 (54.29%), Postives = 94/140 (67.14%), Query Frame = 2
Query:  176 AGKP-AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEA 592
            A +P + RIV+ L+   VP+TAENFR LCT    +  +G+PL ++ S FHR+IP FM+Q            ESIYGEKF DE+   KH  P LLSMANAG +TNGSQFFITTV T  LDG+HVVFG+VL    VV +VE+
Sbjct:   26 ASRPGSNRIVLELYADRVPRTAENFRVLCTNTSKLASTGQPLSFRNSIFHRVIPKFMIQGGDFTRADGTGGESIYGEKFQDEDLTGKHDVPFLLSMANAGANTNGSQFFITTVPTPHLDGKHVVFGRVLKGKGVVRRVES 165          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIH_ASPOR (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.805e-34
Identity = 76/146 (52.05%), Postives = 93/146 (63.70%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGE-KFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            V FD+ + G+  GRI M LF    P+TAENFR  CTGE      G+P  YK S FHR+I  FM+Q             +IYG  +F DENF LKH  PGLLSMAN+GP+TNG QFFITT  T +L+ +HVVFG+V+  MDVV  +E
Sbjct:   16 VFFDITLGGESLGRIKMELFTSITPRTAENFRQFCTGESK-SPQGRPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSRTIYGTPRFQDENFILKHDQPGLLSMANSGPNTNGCQFFITTTATPFLNNKHVVFGQVVEGMDVVRMIE 160          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYP8_CAEEL (Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhabditis elegans GN=cyn-8 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.805e-34
Identity = 75/143 (52.45%), Postives = 90/143 (62.94%), Query Frame = 2
Query:  161 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            FD+ I G+PAGRIV  L+    P+T ENFRA CTGE G   +G    Y+GS FHR+I  FM+Q             SIYG  F DEN  LKH  P LLSMAN GPDTNGSQFFIT+     LDG+H VFG+V+  ++VV  +E
Sbjct:   13 FDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELG-KMNGHYASYQGSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFGEVIKGVEVVKAIE 154          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIA_SCHMA (Peptidyl-prolyl cis-trans isomerase OS=Schistosoma mansoni PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.357e-34
Identity = 81/149 (54.36%), Postives = 93/149 (62.42%), Query Frame = 2
Query:  152 KVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            K  FD++   +  GRI+  LF   VP T  NFR LCT +   G       YKGS FHRIIP FM Q            +SIYG KF DENF  KH    L SMANAGP+TNGSQFFITTV  SWLDG+HVVFGKV+S +DVV K+E+ G
Sbjct:    4 KAFFDIKAGDERLGRIIFELFND-VPDTTRNFRELCTHKNNFG-------YKGSVFHRIIPGFMCQGGDFTNGDGTGGKSIYGNKFKDENFNHKHEAFSL-SMANAGPNTNGSQFFITTVPCSWLDGKHVVFGKVVSGIDVVKKMESLG 143          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYPR_CALVI (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Calliphora vicina GN=NINAA PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.528e-33
Identity = 72/149 (48.32%), Postives = 91/149 (61.07%), Query Frame = 2
Query:  143 ITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            +T+K+  DV+   KP GRIV GLFGK  PKT  NFR +C   +GI  +     Y GS FHR+I  F++Q             SIYG+ F DE   ++H  PG L MAN GPDTNG QF++TTV   WL+G+H VFGKV+  MD VY +E
Sbjct:   24 VTSKIYMDVKHQKKPLGRIVFGLFGKRAPKTVTNFRHICL--RGINGTT----YVGSEFHRVISRFLIQGGDIVNNDGTGSTSIYGDFFQDEALDVEHLRPGYLGMANRGPDTNGCQFYVTTVAAQWLNGKHTVFGKVIEGMDTVYAIE 166          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYPR_DROME (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Drosophila melanogaster GN=ninaA PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.805e-33
Identity = 72/151 (47.68%), Postives = 92/151 (60.93%), Query Frame = 2
Query:  143 ITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKL--KHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            +T+++  DV+   KP GRI  GLFGK  PKT  NFR +C   +GI  +     Y GS FHR++  F++Q             SIYG+ FPDE+  L  +H  PG L MAN GPDTNG QF++TTV   WLDG+H VFGKVL  MD +Y +E
Sbjct:   25 VTSRIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICL--RGINGTS----YVGSRFHRVVDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHTVFGKVLEGMDTIYAIE 169          
The following BLAST results are available for this feature:
BLAST of CF832446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
CYPD_YEAST5.610e-3650.93Peptidyl-prolyl cis-trans isomerase D OS=Saccharom... [more]
CYPH_UROFA9.569e-3654.61Peptidyl-prolyl cis-trans isomerase OS=Uromyces fa... [more]
PPID_SCHPO1.632e-3555.9440 kDa peptidyl-prolyl cis-trans isomerase OS=Schi... [more]
PPIH_ASPFU4.749e-3552.74Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
PPID_USTMA6.203e-3554.29Peptidyl-prolyl cis-trans isomerase D OS=Ustilago ... [more]
PPIH_ASPOR1.805e-3452.05Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
CYP8_CAEEL1.805e-3452.45Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhab... [more]
PPIA_SCHMA2.357e-3454.36Peptidyl-prolyl cis-trans isomerase OS=Schistosoma... [more]
CYPR_CALVI1.528e-3348.32Peptidyl-prolyl cis-trans isomerase, rhodopsin-spe... [more]
CYPR_DROME5.805e-3347.68Peptidyl-prolyl cis-trans isomerase, rhodopsin-spe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832446 ID=CF832446; Name=CF832446; organism=Citrus sinensis; type=EST; length=599bp
GCCGGTGACTGCAGAATGAGAAACAACGAAGTGATATATGGCTTCAACAA
ATTTGCTTCCACTCACGATGCTATGGGCTGTTATCCTGTTGGCCACTTTC
TCTATAATTCTGGCGAAAAAATCGGATCAGAATTTGAAAGAAATCACAAA
CAAAGTTGACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTG
TAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGA
GCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTCCA
CTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCAAG
GAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGA
GAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGGCT
TTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTTCA
TTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTGGA
AAGGTGCTATCGGTGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGGA
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