CF832446

Overview
NameCF832446
Unique NameCF832446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:36..634. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYP9_CAEBR (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis briggsae GN=cyn-9 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 5.805e-33
Identity = 74/159 (46.54%), Postives = 97/159 (61.01%), Query Frame = 2
Query:  134 LKEITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKP-LHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL---SVMDVVYKVEAEG 598
            +  +  +V  D+ +  KP GRI + LF    PKT ENFRALCTGE G+  + K  LHYKG+  HR++  FM+Q             SIYG  F DE F LKH+ P LLSMAN GP++N SQFFITT      +G+HVVFG+V+    V+DV+  +E +G
Sbjct:    1 MSSLEKRVFLDMALDEKPIGRIEIKLFTSEAPKTCENFRALCTGEVGMAPNNKARLHYKGNEIHRVVKKFMIQGGDITDGDGRGGFSIYGRYFDDEKFVLKHSKPYLLSMANKGPNSNSSQFFITTAPAPHCNGKHVVFGEVIKGREVVDVLDNLEVDG 159          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIA_NEOCA (Peptidyl-prolyl cis-trans isomerase OS=Neospora caninum PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.293e-32
Identity = 84/171 (49.12%), Postives = 100/171 (58.48%), Query Frame = 2
Query:   89 LATFSIILAKKSDQNLKEITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLS-VMDVVYKVEAEG 598
            L  F ++LA  +         K   D+EI G+ AGRIV+ L G  VPKT +NF         IG   K   YKGSTFHR+I  FM+Q             SIYG +F DENF LKH   G++SMANAGP+TNGSQFFITTV T WLDGRHVVFGK+ +     V  +EA G
Sbjct:    3 LLFFFLVLAVSAAVAENAGVQKAFMDIEIDGESAGRIVLELRGDVVPKTVKNF---------IGLFDK---YKGSTFHRVIADFMIQGGDFENHNGTGGHSIYGPRFEDENFTLKHDR-GVISMANAGPNTNGSQFFITTVKTEWLDGRHVVFGKITNDSWPTVQAIEALG 160          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.915e-32
Identity = 76/159 (47.80%), Postives = 99/159 (62.26%), Query Frame = 2
Query:  116 KKSDQNLKEITNKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYG-EKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            KKS+Q  + +   V FD+ I   P GR+ M LF   VP+TAENFR LCTGE    ++G P  YK   FHR+I  FM+Q              IYG ++F DENF  KHTG GLLSMAN+GP++NG QFFIT     +LDG+HVVFG+++  +  + K+E
Sbjct:    3 KKSNQVERPV---VFFDISIGDVPVGRMKMELFSDIVPRTAENFRQLCTGE--YKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGLLTLRKIE 156          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 5.434e-31
Identity = 72/135 (53.33%), Postives = 84/135 (62.22%), Query Frame = 2
Query:  185 PAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            PAGR+   LF   VP+T+ENFR LCTGE     +  P  YK S FHRII  FM Q             SIYG+KF DENF LKH   GLLSMAN+GP TNG QFFIT     +LDG+HVVFGKV+  +  + K+E
Sbjct:    2 PAGRLKCELFSDIVPRTSENFRQLCTGE--FRPNHVPEGYKNSIFHRIIKDFMCQGGDFINADGTGSRSIYGDKFDDENFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVVDGLLTLRKME 134          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYP9_CAEEL (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis elegans GN=cyn-9 PE=2 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 7.097e-31
Identity = 71/143 (49.65%), Postives = 89/143 (62.24%), Query Frame = 2
Query:  152 KVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKP-LHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVV 577
            +V  D+ +     GRI + LF +  PKT ENFRALCTGE G+  + K  LHYK + FHRI+  FM+Q             SIYG  F DE FKLKH+ P LLSMAN GP++N SQFFITT      +G+HVVFG+V+   +VV
Sbjct:    6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVV 148          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL6_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos taurus GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.253e-27
Identity = 60/148 (40.54%), Postives = 86/148 (58.11%), Query Frame = 2
Query:  149 NKVDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEA 592
            N V  D+ I   P GR++  L+    PKT +NF+ LCTG+ G  +SG  LHY GS FHR++ +  +Q            ESIYG  F DENF + H   G+L M N G  +NGSQF+IT     +LD ++V FG+++   DV++ +E+
Sbjct:  138 NFVFLDISIDLYPIGRLIFELYSDTCPKTCKNFQILCTGKAGFSQSGIKLHYTGSIFHRVVRNGWVQGGDIVAGKGDNGESIYGPTFEDENFSVPHNKRGVLGMVNKGRHSNGSQFYITLQAAPYLDKKYVAFGQLIEGTDVLHHLES 285          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL6_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo sapiens GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.645e-27
Identity = 66/177 (37.29%), Postives = 99/177 (55.93%), Query Frame = 2
Query:   71 LWAVILLATFSIILAKKSDQNLKEITN-KVDF---DVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            +W ++ +   ++  A   D + K + + K DF   D+ I   P GR++  L+    PKT +NF+ LCTG+ G  + G  LHYK S FHRI+ +  +Q            ESIYG  F DENF + H   G+L MAN G  +NGSQF+IT   T +LD + V FG+++   +V+ ++E
Sbjct:  112 VWDIVDIKPSALYDALTEDFSAKFLRDTKHDFVFLDICIDSSPIGRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYGKGDNGESIYGPTFEDENFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAFGQLIEGTEVLKQLE 288          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIB_TREPA (Probable peptidyl-prolyl cis-trans isomerase OS=Treponema pallidum GN=ppiB PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.819e-25
Identity = 66/135 (48.89%), Postives = 82/135 (60.74%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEA 592
            G IV+ LF +  P T  NF  L  G   + K G+P  Y+G TFHR+I  FM+Q                G +FPDE +  L+H  PG+LSMANAGP TNGSQFFIT V T WLDG+H VFGKV+  M+VV+ + A
Sbjct:   49 GTIVLSLFFEKAPLTVCNFVGLAEGTLAVCK-GRPF-YQGLTFHRVIKDFMIQGGDPQGNGTGGP----GYQFPDECDPALRHDSPGVLSMANAGPGTNGSQFFITHVATPWLDGKHTVFGKVVEGMEVVHAIIA 177          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emericella nidulans GN=cyp1 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.772e-24
Identity = 61/133 (45.86%), Postives = 79/133 (59.40%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKV 586
            G   + L+    PKT +NF  L   ++G        +Y    FHRIIP+FM+Q             SIYGEKF DE    LKHTG G+LSMAN+GP+TNGSQFFIT   T WLDG+H +FG+V S M ++ ++
Sbjct:   12 GSFTVELYNSHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIRSDLKHTGAGILSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRIIQRM 133          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.772e-24
Identity = 61/133 (45.86%), Postives = 79/133 (59.40%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKV 586
            G   + L+    PKT +NF  L   ++G        +Y    FHRIIP+FM+Q             SIYGEKF DE    LKHTG G+LSMAN+GP+TNGSQFF+T   T WLDG+H +FG+V S M V+ ++
Sbjct:   12 GSFTVELYNSHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIRADLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMRVIQRM 133          
The following BLAST results are available for this feature:
BLAST of CF832446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
CYP9_CAEBR5.805e-3346.54Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIA_NEOCA1.293e-3249.12Peptidyl-prolyl cis-trans isomerase OS=Neospora ca... [more]
PPIH_RHIOR4.915e-3247.80Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
PPIH_USTMA5.434e-3153.33Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]
CYP9_CAEEL7.097e-3149.65Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIL6_BOVIN1.253e-2740.54Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos ... [more]
PPIL6_HUMAN3.645e-2737.29Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo... [more]
PPIB_TREPA5.819e-2548.89Probable peptidyl-prolyl cis-trans isomerase OS=Tr... [more]
PPIL1_EMENI3.772e-2445.86Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emer... [more]
PPIL1_ASPOR3.772e-2445.86Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832446 ID=CF832446; Name=CF832446; organism=Citrus sinensis; type=EST; length=599bp
GCCGGTGACTGCAGAATGAGAAACAACGAAGTGATATATGGCTTCAACAA
ATTTGCTTCCACTCACGATGCTATGGGCTGTTATCCTGTTGGCCACTTTC
TCTATAATTCTGGCGAAAAAATCGGATCAGAATTTGAAAGAAATCACAAA
CAAAGTTGACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTG
TAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGA
GCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTCCA
CTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCAAG
GAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGA
GAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGGCT
TTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTTCA
TTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTGGA
AAGGTGCTATCGGTGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGGA
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