CF832446

Overview
NameCF832446
Unique NameCF832446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus fumigatus GN=cyp1 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.434e-24
Identity = 62/133 (46.62%), Postives = 79/133 (59.40%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKV 586
            G   + L+ +  PKT  NF  L   ++G        +Y    FHRIIP+FM+Q             SIYGEKF DE    LKHTG G+LSMAN+GP+TNGSQFFIT   T WLDG+H +FG+V S M V+ ++
Sbjct:   12 GSFTVELYNEHAPKTCRNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIHPGLKHTGAGVLSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRVIQRM 133          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL1_SCHPO (Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizosaccharomyces pombe GN=ppi1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.872e-23
Identity = 59/129 (45.74%), Postives = 78/129 (60.47%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDV 574
            G+I++ L+ +  PKT +NF  L           K  +Y G  FHR+IP F++Q             SIYG+KF DE +  L HTG G+LSMANAGP+TN SQFFIT   T WLDG+H +FG+V+S + V
Sbjct:   11 GKILIELYTEHAPKTCQNFYTLA----------KEGYYDGVIFHRVIPDFVIQGGDPTGTGRGGT-SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSV 128          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL1_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Gibberella zeae GN=CYP1 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.872e-23
Identity = 60/133 (45.11%), Postives = 80/133 (60.15%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKV 586
            G +++ L+    PKT  NF  L    +G        +Y  + FHRIIP+FM+Q             SI+GEKF DE +  LKHTG G+LSMANAGP+TNGSQFF+T   T WLDG+H +FG+V S M  + ++
Sbjct:   12 GSLILELYTTHAPKTCNNFTTLV--RRG--------YYDNTIFHRIIPNFMVQGGDPTGTGRGG-SSIFGEKFEDEIDPGLKHTGAGILSMANAGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMGTIKRM 133          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPNG (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus niger GN=cypC PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.872e-23
Identity = 61/133 (45.86%), Postives = 78/133 (58.65%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKV 586
            G   + L+    PKT +NF  L   ++G        +Y    FHRIIP+FM+Q             SIYGEKF DE N  LKHTG G+LSMAN+GP+ NGSQFFIT     WLDG+H +FG+V S M V+ ++
Sbjct:   12 GSFTVELYNAHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEINPNLKHTGAGILSMANSGPNNNGSQFFITLAPQPWLDGKHTIFGRVKSGMRVIQRM 133          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL1_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neurospora crassa GN=cyp-1 PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 4.170e-23
Identity = 61/133 (45.86%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKV 586
            G   + L+    PKT +NF  L   ++G        +Y  + FHRII  FM+Q             SIYGEKF DE    LKHTG G+LSMANAGP+TNGSQFFIT   T WLDG+H +FG+V   M V+ ++
Sbjct:   12 GTFTLELYTNHAPKTCKNFATLA--DRG--------YYDSTVFHRIIKDFMIQGGDPTGTGRGG-SSIYGEKFEDEIHPGLKHTGAGVLSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVKKGMGVIRRM 133          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL1_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhizopus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.446e-23
Identity = 62/133 (46.62%), Postives = 79/133 (59.40%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKV 586
            G I + L+    P+T +NF  L           K  +Y G +FHRII  FM+Q             SIYGE+F DE N  L+HTG G+LSMANAGP+TNGSQFFIT   T WLDG+H +FG+V   M+VV ++
Sbjct:   14 GSIHIELYWDHAPRTCKNFYELA----------KRGYYDGVSFHRIIADFMIQGGDPTGTGRGGT-SIYGERFADEINPGLQHTGAGILSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVSDGMNVVKRM 135          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL1_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus musculus GN=Ppil1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.113e-23
Identity = 61/133 (45.86%), Postives = 80/133 (60.15%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKV 586
            G IV+ L+ K  PKT +NF  L    +G        +Y G+ FHRII  FM+Q             SIYG++F DE +  LK TG G+L+MANAGPDTNGSQFF+T   T WLDG+H +FG+V   + +V +V
Sbjct:   21 GVIVLELYWKHAPKTCKNFAELA--RRG--------YYNGTKFHRIIKDFMIQGGDPTGTGRGGA-SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRV 142          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL1_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo sapiens GN=PPIL1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.113e-23
Identity = 61/133 (45.86%), Postives = 80/133 (60.15%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKV 586
            G IV+ L+ K  PKT +NF  L    +G        +Y G+ FHRII  FM+Q             SIYG++F DE +  LK TG G+L+MANAGPDTNGSQFF+T   T WLDG+H +FG+V   + +V +V
Sbjct:   21 GIIVLELYWKHAPKTCKNFAELA--RRG--------YYNGTKFHRIIKDFMIQGGDPTGTGRGGA-SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRV 142          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL1_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos taurus GN=PPIL1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.113e-23
Identity = 61/133 (45.86%), Postives = 80/133 (60.15%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKV 586
            G IV+ L+ K  PKT +NF  L    +G        +Y G+ FHRII  FM+Q             SIYG++F DE +  LK TG G+L+MANAGPDTNGSQFF+T   T WLDG+H +FG+V   + +V +V
Sbjct:   21 GIIVLELYWKHAPKTCKNFAELA--RRG--------YYNGTKFHRIIKDFMIQGGDPTGTGRGGA-SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRV 142          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYPE_DICDI (Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyostelium discoideum GN=cypE PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.530e-22
Identity = 62/135 (45.93%), Postives = 78/135 (57.78%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEA 592
            G I + L+    PK  +NF  L           K  +Y  + FHR+I  FM+Q            ESIYG+KF DE  K LKHTG G+LSMAN+G ++NGSQFFIT   T WLDG+H +FG+V S M VV K+ A
Sbjct:   13 GDITLELYYNHAPKACKNFYEL----------SKRGYYDNTIFHRLIKDFMIQGGDPLGNGRGG-ESIYGKKFEDEITKELKHTGAGILSMANSGVNSNGSQFFITFGPTPWLDGKHTIFGRVKSGMKVVQKMNA 136          
The following BLAST results are available for this feature:
BLAST of CF832446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIL1_ASPFU6.434e-2446.62Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_SCHPO1.872e-2345.74Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizo... [more]
PPIL1_GIBZE1.872e-2345.11Peptidyl-prolyl cis-trans isomerase-like 1 OS=Gibb... [more]
PPIL1_ASPNG1.872e-2345.86Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_NEUCR4.170e-2345.86Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neur... [more]
PPIL1_RHIOR5.446e-2346.62Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhiz... [more]
PPIL1_MOUSE7.113e-2345.86Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus ... [more]
PPIL1_HUMAN7.113e-2345.86Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo... [more]
PPIL1_BOVIN7.113e-2345.86Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos ... [more]
CYPE_DICDI3.530e-2245.93Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832446 ID=CF832446; Name=CF832446; organism=Citrus sinensis; type=EST; length=599bp
GCCGGTGACTGCAGAATGAGAAACAACGAAGTGATATATGGCTTCAACAA
ATTTGCTTCCACTCACGATGCTATGGGCTGTTATCCTGTTGGCCACTTTC
TCTATAATTCTGGCGAAAAAATCGGATCAGAATTTGAAAGAAATCACAAA
CAAAGTTGACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTG
TAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGA
GCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTCCA
CTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCAAG
GAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGA
GAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGGCT
TTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTTCA
TTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTGGA
AAGGTGCTATCGGTGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGGA
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