CF832446

Overview
NameCF832446
Unique NameCF832446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL1_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryptococcus neoformans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.027e-21
Identity = 61/147 (41.50%), Postives = 84/147 (57.14%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEA 592
            V FD  +     G   + L+    PKT  NF  L   E+G        +Y G  FHRIIP+FM+Q             SIYG++F DE + +L+  G G+L+MAN+GP+TNGSQFFIT   T +LDG+H +FG+V S M  + ++EA
Sbjct:    9 VTFDTSV-----GSFTVELYTAHAPKTCNNFAKLA--ERG--------YYNGVIFHRIIPNFMIQGGDPTGTGRGGT-SIYGDRFADEIHPELRFVGAGILAMANSGPNTNGSQFFITCAPTPYLDGKHTIFGRVSSGMKTIQRLEA 139          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYP15_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizopus oryzae GN=cyp15 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.288e-21
Identity = 60/136 (44.12%), Postives = 79/136 (58.09%), Query Frame = 2
Query:  188 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEA 592
            +G I M LF  A PK  ENF           K+G   +Y    FHR+I  FM+Q            ESI+G+ F DE + + +H  P  +SMANAGP+TNGSQFFIT   T+WLD +H VFG+V + MDVV+ +E+
Sbjct:  485 SGDIHMRLFPDAAPKAVENFTTHA-------KNG---YYDNLIFHRVIKGFMIQTGCPFGDGTGG-ESIWGDDFEDEFSREFRHDRPYTVSMANAGPNTNGSQFFITVAPTTWLDNKHSVFGRVTAGMDVVHSIES 609          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPWD1_MOUSE (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Mus musculus GN=Ppwd1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.136e-20
Identity = 63/142 (44.37%), Postives = 77/142 (54.23%), Query Frame = 2
Query:  164 DVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKV 586
            D  I     G I + LF    PKT ENF   C   +         +Y G TFHRII  FM+Q            ESI+G +F DE +  L+H  P  LSMANAG +TNGSQFFIT V T WLD +H VFG+V   M+VV ++
Sbjct:  492 DSAIVHTSMGDIHIKLFPVECPKTVENF---CVHSRNG-------YYNGHTFHRIIKGFMIQTGDPTGTGMGG-ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVSKGMEVVQRI 622          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPWD1_BOVIN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Bos taurus GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.136e-20
Identity = 63/142 (44.37%), Postives = 77/142 (54.23%), Query Frame = 2
Query:  164 DVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKV 586
            D  I     G I + LF    PKT ENF   C   +         +Y G TFHRII  FM+Q            ESI+G +F DE +  L+H  P  LSMANAG +TNGSQFFIT V T WLD +H VFG+V   M+VV ++
Sbjct:  490 DSAIIHTSMGDIHIKLFPVECPKTVENF---CVHSRNG-------YYNGHTFHRIIKGFMIQTGDPTGTGMGG-ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRI 620          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPWD1_PONAB (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Pongo abelii GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.937e-20
Identity = 63/142 (44.37%), Postives = 76/142 (53.52%), Query Frame = 2
Query:  164 DVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKV 586
            D  I     G I   LF    PKT ENF   C   +         +Y G TFHRII  FM+Q            ESI+G +F DE +  L+H  P  LSMANAG +TNGSQFFIT V T WLD +H VFG+V   M+VV ++
Sbjct:  492 DSAIIHTSMGDIHTKLFPVECPKTVENF---CVHSRNG-------YYNGHTFHRIIKGFMIQTGDPTGTGMGG-ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRI 622          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPWD1_HUMAN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Homo sapiens GN=PPWD1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.937e-20
Identity = 63/142 (44.37%), Postives = 76/142 (53.52%), Query Frame = 2
Query:  164 DVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKV 586
            D  I     G I   LF    PKT ENF   C   +         +Y G TFHRII  FM+Q            ESI+G +F DE +  L+H  P  LSMANAG +TNGSQFFIT V T WLD +H VFG+V   M+VV ++
Sbjct:  492 DSAIIHTSMGDIHTKLFPVECPKTVENF---CVHSRNG-------YYNGHTFHRIIKGFMIQTGDPTGTGMGG-ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRI 622          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL3_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhizopus oryzae GN=cyp4 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.937e-20
Identity = 64/145 (44.14%), Postives = 83/145 (57.24%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXX-----ESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL----SVMDVVYKVEAE 595
            G I + +F +AVPKTAENF ALC        SG   +Y  +TFHR IP FM+Q                  SI+G+KF DE    LKH   G++SMAN+GP+TNGSQFFIT      LD ++ VFGKV+    S +D++ KV  +
Sbjct:   10 GDIKIEVFCEAVPKTAENFLALCA-------SG---YYDNNTFHRNIPGFMIQVHEHLHTGDPTGTGKGGNSIWGKKFNDEIRSTLKHNSRGIVSMANSGPNTNGSQFFITYAKHPHLDTKYTVFGKVIDGADSTLDMMEKVPVD 144          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYP9_SCHPO (Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosaccharomyces pombe GN=cyp9 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.771e-19
Identity = 55/134 (41.04%), Postives = 77/134 (57.46%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            G I + L+ +  PK  +NF      E G        +Y  + FHRII +FM+Q            ESI+ + F DE +  LKH  P  +SMAN+GP+TNGSQFFITT  T WLDG+H +F +  + +DVV+++E
Sbjct:  464 GDISIKLYPEEAPKAVQNFTT--HAENG--------YYDNTIFHRIIKNFMIQGGDPLGDGTGG-ESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIE 586          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYP7_YEAST (Peptidyl-prolyl cis-trans isomerase CYP7 OS=Saccharomyces cerevisiae GN=CPR7 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.138e-19
Identity = 65/170 (38.24%), Postives = 83/170 (48.82%), Query Frame = 2
Query:  155 VDFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGE-KGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXES---------IYGEK--------------FPDENFKLKHTGPGLLSMANAG-PDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            V  D+ I  KP GRIV  LF +  PKT ENF  LC G+ K   K  + L YKG+ FHR++ +FM+Q             S         IY +K              F DEN   +   P  L MAN G P+TN SQFFITT     L+G+H +FG+V+    VV  +E
Sbjct:    7 VYLDISIDKKPIGRIVCKLFREKAPKTTENFYKLCAGDVKSPLKDQQYLSYKGNGFHRVVKNFMIQAGDIVFGTQKDSSSSSVGKGGCSIYADKEEVKTDDESFCYGNFEDENLG-EFVEPFTLGMANLGSPNTNNSQFFITTYAAPHLNGKHSIFGQVVHGKSVVRTIE 175          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL2_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhizopus oryzae GN=cyp14 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.275e-18
Identity = 60/135 (44.44%), Postives = 71/135 (52.59%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEA 592
            G I + LF    PKT  NF  L        K+G   +Y    FHR I  FM+Q            ESI+   FPDE    LKH   G+LSMAN G DTNGSQFFIT      LDG H VFGKV+  +DV+ K+E+
Sbjct:  295 GNINVELFSDKKPKTCHNFIELA-------KTG---YYNDVIFHRNIKKFMIQGGDPTGTGKGG-ESIWKRYFPDEIKTTLKHDARGVLSMANRGKDTNGSQFFITYAAAPHLDGLHTVFGKVVGGLDVLSKLES 418          
The following BLAST results are available for this feature:
BLAST of CF832446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIL1_CRYNE1.027e-2141.50Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryp... [more]
CYP15_RHIOR2.288e-2144.12Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizo... [more]
PPWD1_MOUSE1.136e-2044.37Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPWD1_BOVIN1.136e-2044.37Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPWD1_PONAB1.937e-2044.37Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPWD1_HUMAN1.937e-2044.37Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPIL3_RHIOR1.937e-2044.14Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhiz... [more]
CYP9_SCHPO4.771e-1941.04Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosac... [more]
CYP7_YEAST8.138e-1938.24Peptidyl-prolyl cis-trans isomerase CYP7 OS=Saccha... [more]
PPIL2_RHIOR5.275e-1844.44Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhiz... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832446 ID=CF832446; Name=CF832446; organism=Citrus sinensis; type=EST; length=599bp
GCCGGTGACTGCAGAATGAGAAACAACGAAGTGATATATGGCTTCAACAA
ATTTGCTTCCACTCACGATGCTATGGGCTGTTATCCTGTTGGCCACTTTC
TCTATAATTCTGGCGAAAAAATCGGATCAGAATTTGAAAGAAATCACAAA
CAAAGTTGACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTG
TAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGA
GCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTCCA
CTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCAAG
GAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGA
GAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGGCT
TTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTTCA
TTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTGGA
AAGGTGCTATCGGTGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGGA
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