CF832446

Overview
NameCF832446
Unique NameCF832446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL3_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans GN=CYP10 PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 6.890e-18
Identity = 57/134 (42.54%), Postives = 77/134 (57.46%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            G I + LF ++VP+TAENF ALC        SG+   Y G+ FHR I  FM+Q            +SI+G  F DE    L+    G+++MANAGPDTN SQFFIT      LDG++ +FGKV+  M+ +  +E
Sbjct:   10 GDIKIELFCESVPRTAENFLALCA-------SGQ---YDGTLFHRNIRGFMIQGGDPTGTGKGG-QSIWGRPFSDEIRQTLRFNNRGMVAMANAGPDTNKSQFFITYAKQPSLDGKYSIFGKVIDGMETLDSME 132          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL3_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neurospora crassa GN=cyp-10 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.998e-18
Identity = 59/141 (41.84%), Postives = 76/141 (53.90%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXX----ESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVEAEG 598
            G + + +F ++VPKTAENF ALC        SG   +Y  S FHR+IPSFM+Q                 SIYG  F DE    L+H   G++SMAN GP+TNGSQFFI       LDG + VFGK++    +    + EG
Sbjct:   10 GDLKIEIFCESVPKTAENFLALCA-------SG---YYNASPFHRMIPSFMVQTGAPANPSPPENPKGGRSIYGPTFEDEIRPVLRHNERGIVSMANKGPNTNGSQFFILFDKAPHLDGLNTVFGKLIGDESLQTLAKLEG 140          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL3_CHICK (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gallus gallus GN=PPIL3 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.175e-17
Identity = 56/134 (41.79%), Postives = 75/134 (55.97%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            G I + LF +  PKT ENF ALC             +Y G  FHR I  FM+Q             SI+G+KF DE  + LKH+  G++SMAN GP+TNGSQFFIT      LD ++ VFGKV+  ++ + ++E
Sbjct:   10 GDIKIELFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPLGTGKGGT-SIWGKKFEDEFSEYLKHSVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELE 132          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL3_RAT (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rattus norvegicus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.005e-17
Identity = 55/134 (41.04%), Postives = 74/134 (55.22%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            G I + +F +  PKT ENF ALC             +Y G  FHR I  FM+Q             SI+G+KF DE  + LKH   G++SMAN GP+TNGSQFFIT      LD ++ VFGKV+  ++ + ++E
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPTGTGRGG-SSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELE 132          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL3_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo sapiens GN=PPIL3 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.618e-17
Identity = 55/134 (41.04%), Postives = 74/134 (55.22%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            G I + +F +  PKT ENF ALC             +Y G  FHR I  FM+Q             SI+G+KF DE  + LKH   G++SMAN GP+TNGSQFFIT      LD ++ VFGKV+  ++ + ++E
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCIFHRNIKGFMVQTGDPTGTGRGG-NSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELE 132          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL2_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryptococcus neoformans GN=CYP8 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.618e-17
Identity = 57/136 (41.91%), Postives = 73/136 (53.68%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFK---LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            G + + L G   PKT  NF  L        K+GK   Y    FHR+IP FM+Q            ES +GE F DE+ +    KH   G+LSMAN+GP TNGSQFF T   T  LDG+H VFGK++   + + K+E
Sbjct:  323 GPLNVELHGDRAPKTVYNFVQLA-------KAGK---YDNVVFHRLIPGFMVQGGDPTGTGRGG-ESYWGEPFRDEHGEKGAYKHDSRGVLSMANSGPRTNGSQFFFTFRPTPHLDGKHTVFGKLVGGEETLDKIE 447          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL2_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.419e-17
Identity = 53/134 (39.55%), Postives = 74/134 (55.22%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            G + + L     PKT ENF  LC          K  +Y G+ FHR I +F++Q            ES +G+ F DE    L HTG G+LSMAN+GP+TN SQFFIT  + ++LD +H +FG+V+   D +  +E
Sbjct:  289 GDLNLELHCDLTPKTCENFIKLC----------KKQYYDGTIFHRSIRNFVIQGGDPTGTGTGG-ESFWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAME 411          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL2_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.466e-17
Identity = 53/134 (39.55%), Postives = 75/134 (55.97%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            G + + L     PKT ENF  LC          K  +Y G+ FHR I +F++Q            ES +G+ F DE    L HTG G+LSMAN+GP++N SQFFIT  + ++LD +H +FG+V+   DV+  +E
Sbjct:  289 GDLNLELHCDLTPKTCENFIRLC----------KKHYYDGTIFHRSIRNFVIQGGDPTGTGTGG-ESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAME 411          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIB_STRCH (Peptidyl-prolyl cis-trans isomerase B OS=Streptomyces chrysomallus GN=cypB PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.466e-17
Identity = 53/128 (41.41%), Postives = 68/128 (53.12%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKG-----IGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKV 556
            G I + L     PKT  NF  L TG++       G+      Y G+ FHR+I  FM+Q                G KF DE + +L  T P LL+MANAGP TNGSQFF+T   T+WL G+H +FG+V
Sbjct:   14 GDIEIRLLPNHAPKTVRNFVELATGQREWVNPETGEKSTDRLYDGTVFHRVISGFMIQGGDPLGNGTGGP----GYKFADEFHPELGFTQPYLLAMANAGPGTNGSQFFLTVSPTAWLTGKHTIFGEV 137          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL6_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus musculus GN=Ppil6 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.780e-17
Identity = 49/134 (36.57%), Postives = 68/134 (50.75%), Query Frame = 2
Query:   71 LWAVILLATFSIILAKKSDQNLKEITN-KVDF---DVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSM 460
            +W VI +   ++  A   D   K + + K DF   D+ I   P GR++  L+  A P+T  NF+ LCTG  G  + G  LHYK S FHR++ +  +Q            ESIYG  F DENF + H   G+L M
Sbjct:  114 VWDVIDVRPSALYEALTLDYATKFLKDTKHDFVYLDICIDLSPIGRLIFELYCDACPRTCTNFQVLCTGTSGFSERGTKLHYKDSIFHRVVQNGWIQGGDIVQGRGDDGESIYGPTFEDENFSIPHNKRGVLGM 247          

HSP 2 Score: 23.483 bits (49), Expect = 6.780e-17
Identity = 11/24 (45.83%), Postives = 13/24 (54.17%), Query Frame = 3
Query:  477 TPMVHNSSLQL*QLAGWMAGMLYL 548
            TPM HNS+    QL  W+  M  L
Sbjct:  253 TPMGHNSTSHYRQLPTWIKNMWLL 276          
The following BLAST results are available for this feature:
BLAST of CF832446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIL3_CRYNE6.890e-1842.54Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryp... [more]
PPIL3_NEUCR8.998e-1841.84Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neur... [more]
PPIL3_CHICK1.175e-1741.79Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gall... [more]
PPIL3_RAT2.005e-1741.04Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ratt... [more]
PPIL3_HUMAN2.618e-1741.04Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo... [more]
PPIL2_CRYNE2.618e-1741.91Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryp... [more]
PPIL2_MOUSE3.419e-1739.55Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus ... [more]
PPIL2_HUMAN4.466e-1739.55Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo... [more]
PPIB_STRCH4.466e-1741.41Peptidyl-prolyl cis-trans isomerase B OS=Streptomy... [more]
PPIL6_MOUSE6.780e-1736.57Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832446 ID=CF832446; Name=CF832446; organism=Citrus sinensis; type=EST; length=599bp
GCCGGTGACTGCAGAATGAGAAACAACGAAGTGATATATGGCTTCAACAA
ATTTGCTTCCACTCACGATGCTATGGGCTGTTATCCTGTTGGCCACTTTC
TCTATAATTCTGGCGAAAAAATCGGATCAGAATTTGAAAGAAATCACAAA
CAAAGTTGACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTG
TAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGA
GCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTCCA
CTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCAAG
GAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGA
GAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGGCT
TTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTTCA
TTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTGGA
AAGGTGCTATCGGTGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGGA
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