CF832446

Overview
NameCF832446
Unique NameCF832446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL3_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibberella zeae GN=CYP10 PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 7.617e-17
Identity = 57/128 (44.53%), Postives = 70/128 (54.69%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXX----ESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL 559
            G I + ++ ++VPKTAENF ALC    G G      +Y  S FHR+IP FM Q                 SI+G  F DE    L+H   G+LSMAN GP TNGSQFFIT      LDG + VFG+V+
Sbjct:   10 GDIKVEIYCESVPKTAENFLALC----GSG------YYDKSPFHRVIPKFMAQTGAPATPNPPENPKGGRSIWGGAFEDEIRPALRHGARGVLSMANKGPGTNGSQFFITFDKAPHLDGLNTVFGRVI 127          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL3_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus musculus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.949e-17
Identity = 54/134 (40.30%), Postives = 73/134 (54.48%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            G I + +F +  PKT ENF ALC             +Y G  FHR I  FM+Q             SI+ +KF DE  + LKH   G++SMAN GP+TNGSQFFIT      LD ++ VFGKV+  ++ + ++E
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPTGTGRGG-SSIWAKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELE 132          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIA_MYCTU (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium tuberculosis GN=ppiA PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.949e-17
Identity = 59/147 (40.14%), Postives = 75/147 (51.02%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGK---SGKPL--HYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLS-----VMDVVYKVEAEG 598
            G I + LFG   PKT  NF  L  G K       SG P    Y G+ FHR+I  FM+Q                G KF DE + +L+   P LL+MANAGP TNGSQFFIT   T  L+ RH +FG+V+      V++ + K   +G
Sbjct:   24 GDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP----GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDG 166          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIA_MYCBO (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium bovis GN=ppiA PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.949e-17
Identity = 59/147 (40.14%), Postives = 75/147 (51.02%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGK---SGKPL--HYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLS-----VMDVVYKVEAEG 598
            G I + LFG   PKT  NF  L  G K       SG P    Y G+ FHR+I  FM+Q                G KF DE + +L+   P LL+MANAGP TNGSQFFIT   T  L+ RH +FG+V+      V++ + K   +G
Sbjct:   24 GDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP----GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDG 166          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIA_MYCLE (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium leprae GN=ppiA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.697e-16
Identity = 60/147 (40.82%), Postives = 74/147 (50.34%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGK---SGKPL--HYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL-----SVMDVVYKVEAEG 598
            G I + LFG  VPKT  NF  L  G K       SG P    Y G+ FHR+I  FM+Q                G KF DE + +L+   P LL+MANAGP TNGSQFFIT   T  L+ RH +FG+V       V+D +     +G
Sbjct:   24 GDIKVALFGNHVPKTVANFVGLAQGTKEYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP----GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGETPHLNRRHTIFGEVTDPDSQKVVDAISTTATDG 166          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYP10_CAEEL (Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorhabditis elegans GN=cyn-10 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 3.780e-16
Identity = 53/135 (39.26%), Postives = 70/135 (51.85%), Query Frame = 2
Query:  188 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            +G I + L+    PK  ENF ALC  +          +Y G  FHR I  FM+Q            ESI+G  F DE    LKH   G +SMAN GPD+N SQFFIT    + LD ++ +FGKV+   D + ++E
Sbjct:    9 SGDIKIELYVDDAPKACENFLALCASD----------YYNGCIFHRNIKDFMVQTGDPTHSGKGG-ESIWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGKVIDGFDTLEEIE 132          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: SDC10_DANRE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Danio rerio GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.100e-15
Identity = 52/134 (38.81%), Postives = 69/134 (51.49%), Query Frame = 2
Query:  188 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKV 586
            AG I + L+ K  PK   NF  LC             +Y G+ FHR++P F++Q            ESIYG  F DE + +L+    GL++MANAGP  NGSQFF T      L+ +H +FGKV    D VY +
Sbjct:   21 AGDIDIELWSKETPKACRNFVQLCMEG----------YYDGTIFHRMVPEFIVQGGDPTGTGTGG-ESIYGRPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTG--DTVYNM 141          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL3_DICDI (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dictyostelium discoideum GN=ppil3 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.100e-15
Identity = 55/139 (39.57%), Postives = 76/139 (54.68%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLS---VMDVVYKVEAE 595
            G I + +F  +VP  +ENF ALC             +Y  + FHR I  FM+Q            ESI+ ++F DE    LKH   G+LSMAN+GPDTNGSQFFIT      L+  + VFGK+++   V+D++ KV  +
Sbjct:   10 GDIKVEIFCDSVPLASENFLALCASN----------YYNNTIFHRNIKGFMIQGGDPTNTGRGG-ESIWKKQFKDEFPSHLKHNTRGILSMANSGPDTNGSQFFITYGKHRSLNKVYTVFGKIIAGIEVLDLMEKVPVD 137          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL2_ARATH (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.876e-15
Identity = 50/122 (40.98%), Postives = 70/122 (57.38%), Query Frame = 2
Query:  227 PKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMDVVYKVE 589
            P+  ENF  LC  E+G        +Y G  FHR I +FM+Q            ESI+G+ F DE N KL H+G G++SMAN+GP TNGSQFF+   + + L+ +H VFG V+  +  +  +E
Sbjct:  365 PRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQGGDPTGTGKGG-ESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAME 475          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: CYPR_YEAST (Peptidyl-prolyl cis-trans isomerase CPR4 OS=Saccharomyces cerevisiae GN=CPR4 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.876e-15
Identity = 50/128 (39.06%), Postives = 69/128 (53.91%), Query Frame = 2
Query:  209 LFGKAVPKTAENFRALCTGEKGI--GKSGKPLH---YKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT--TSWLDGRHVVFGKVLSVMD 571
            L+G  VPKT  NF  L  G K +  GK    +H   Y+ +  +++ P+  +Q             ++YG KF DENF LKH  P  L+MA  GPD+N S+F ITT       LDG+ VVFG++ S +D
Sbjct:   72 LYGTVVPKTVNNFAMLAHGVKAVIEGKDPNDIHTYSYRKTKINKVYPNKYIQGGVVAPDVGPF--TVYGPKFDDENFYLKHDRPERLAMAYFGPDSNTSEFIITTKADGNEELDGKSVVFGQITSGLD 197          
The following BLAST results are available for this feature:
BLAST of CF832446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIL3_GIBZE7.617e-1744.53Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibb... [more]
PPIL3_MOUSE9.949e-1740.30Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus ... [more]
PPIA_MYCTU9.949e-1740.14Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
PPIA_MYCBO9.949e-1740.14Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
PPIA_MYCLE1.697e-1640.82Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
CYP10_CAEEL3.780e-1639.26Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorha... [more]
SDC10_DANRE1.100e-1538.81Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Da... [more]
PPIL3_DICDI1.100e-1539.57Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dict... [more]
PPIL2_ARATH1.876e-1540.98Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arab... [more]
CYPR_YEAST1.876e-1539.06Peptidyl-prolyl cis-trans isomerase CPR4 OS=Saccha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832446 ID=CF832446; Name=CF832446; organism=Citrus sinensis; type=EST; length=599bp
GCCGGTGACTGCAGAATGAGAAACAACGAAGTGATATATGGCTTCAACAA
ATTTGCTTCCACTCACGATGCTATGGGCTGTTATCCTGTTGGCCACTTTC
TCTATAATTCTGGCGAAAAAATCGGATCAGAATTTGAAAGAAATCACAAA
CAAAGTTGACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTG
TAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGA
GCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTCCA
CTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCAAG
GAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGA
GAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGGCT
TTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTTCA
TTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTGGA
AAGGTGCTATCGGTGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGGA
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