CF832446

Overview
NameCF832446
Unique NameCF832446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:36..634. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPI1_STAAR (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0916 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12
Identity = 53/151 (35.10%), Postives = 65/151 (43.05%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT----------------------------TSWLDGRHVVFGKVL 559
            G +   LF    PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYG  F DE         G LSMAN+GP+TNGSQFFI  +                             T WLD +H VFG+++
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQII 164          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPI1_STAAN (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain N315) GN=SA0815 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12
Identity = 53/151 (35.10%), Postives = 65/151 (43.05%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT----------------------------TSWLDGRHVVFGKVL 559
            G +   LF    PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYG  F DE         G LSMAN+GP+TNGSQFFI  +                             T WLD +H VFG+++
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQII 164          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPI1_STAAM (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0954 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12
Identity = 53/151 (35.10%), Postives = 65/151 (43.05%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT----------------------------TSWLDGRHVVFGKVL 559
            G +   LF    PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYG  F DE         G LSMAN+GP+TNGSQFFI  +                             T WLD +H VFG+++
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQII 164          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPI1_STAAC (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain COL) GN=SACOL0957 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12
Identity = 53/151 (35.10%), Postives = 65/151 (43.05%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT----------------------------TSWLDGRHVVFGKVL 559
            G +   LF    PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYG  F DE         G LSMAN+GP+TNGSQFFI  +                             T WLD +H VFG+++
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLTDGGWPQPIVDAYGEKGGTPWLDQKHTVFGQII 164          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPI1_STAAB (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0821 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12
Identity = 53/151 (35.10%), Postives = 65/151 (43.05%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT----------------------------TSWLDGRHVVFGKVL 559
            G +   LF    PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYG  F DE         G LSMAN+GP+TNGSQFFI  +                             T WLD +H VFG+++
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQII 164          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPI1_STAA8 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00891 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12
Identity = 53/151 (35.10%), Postives = 65/151 (43.05%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT----------------------------TSWLDGRHVVFGKVL 559
            G +   LF    PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYG  F DE         G LSMAN+GP+TNGSQFFI  +                             T WLD +H VFG+++
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQII 164          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPI1_STAA3 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0857 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12
Identity = 53/151 (35.10%), Postives = 65/151 (43.05%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT----------------------------TSWLDGRHVVFGKVL 559
            G +   LF    PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYG  F DE         G LSMAN+GP+TNGSQFFI  +                             T WLD +H VFG+++
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQII 164          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL2_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizosaccharomyces pombe GN=cyp8 PE=2 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 4.325e-12
Identity = 42/100 (42.00%), Postives = 58/100 (58.00%), Query Frame = 2
Query:  299 HYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKV---LSVMDVVYKV 586
            +Y+ + FHR I  FM+Q            +SI+G+ F DE    LKH   G++SMAN G +TNGSQFFI       LD +H +FG+V   L+V+D + KV
Sbjct:  311 YYRNTIFHRNIARFMIQGGDPSGTGRGG-QSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKV 409          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL3_EMENI (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Emericella nidulans GN=cyp10 PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.147e-11
Identity = 57/172 (33.14%), Postives = 73/172 (42.44%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXE----------------SIYGEKFPDENF---KLKHTGPGLLSMAN--------------AGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVM------DVVYKVE 589
            G + + LF +AVPKTAENF ALC              Y  + FHR+IP FM+Q            +                SIY     ++      L+H   G+LSMA+               GP  NGSQFFIT      LDG   VFGKVL++       DV+ K+E
Sbjct:   10 GDLKVELFCEAVPKTAENFIALCAAGA----------YNDTPFHRLIPGFMIQGGDISLGPAANSQGTTPMLPFDDIPKGGTSIYHPSALNQEIHLPALRHNTRGILSMASRPVKNQTAPGSQGATGPTINGSQFFITFAAAPHLDGSSTVFGKVLNLTAEDEGGDVLSKLE 171          
BLAST of CF832446 vs. ExPASy Swiss-Prot
Match: PPIL2_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neurospora crassa GN=cyp-8 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.147e-11
Identity = 47/128 (36.72%), Postives = 63/128 (49.22%), Query Frame = 2
Query:  191 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSVMD 571
            G + + L  +  PK   NF  L   EKG        +Y+   FHR I +FM+Q             SI+G+ F DE      H+  G++SMAN G +TN SQFFIT    S LD +H +F KV+   D
Sbjct:  339 GPLTLELLPEFAPKAVWNFLRL--SEKG--------YYRDVAFHRSIRNFMIQGGDPSGTGRGG-SSIWGKNFEDEFEGPNTHSARGIVSMANKGKNTNSSQFFITYRPASHLDRKHTIFAKVIEGQD 455          
The following BLAST results are available for this feature:
BLAST of CF832446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPI1_STAAR3.312e-1235.10Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAN3.312e-1235.10Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAM3.312e-1235.10Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAC3.312e-1235.10Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAB3.312e-1235.10Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA83.312e-1235.10Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA33.312e-1235.10Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIL2_SCHPO4.325e-1242.00Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizo... [more]
PPIL3_EMENI2.147e-1133.14Peptidyl-prolyl cis-trans isomerase-like 3 OS=Emer... [more]
PPIL2_NEUCR2.147e-1136.72Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neur... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832446 ID=CF832446; Name=CF832446; organism=Citrus sinensis; type=EST; length=599bp
GCCGGTGACTGCAGAATGAGAAACAACGAAGTGATATATGGCTTCAACAA
ATTTGCTTCCACTCACGATGCTATGGGCTGTTATCCTGTTGGCCACTTTC
TCTATAATTCTGGCGAAAAAATCGGATCAGAATTTGAAAGAAATCACAAA
CAAAGTTGACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTG
TAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGA
GCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTCCA
CTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCAAG
GAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGA
GAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGGCT
TTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTTCA
TTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTGGA
AAGGTGCTATCGGTGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGGA
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