CF832450
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832450 vs. ExPASy Swiss-Prot
Match: H2B_OLILU (Histone H2B OS=Olisthodiscus luteus PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 1.110e-35 Identity = 74/91 (81.32%), Postives = 83/91 (91.21%), Query Frame = 2 Query: 248 IETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 520 +ETY YI+KVLKQVHPD GIS + M IMNSFINDIFE+LA EASRLARYNK+ T++SREIQTAVRL+LPGELAKHAVSEGTKAVTKFTS+ Sbjct: 24 VETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSN 114
BLAST of CF832450 vs. ExPASy Swiss-Prot
Match: H2B_HOLTU (Histone H2B OS=Holothuria tubulosa PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.110e-35 Identity = 72/90 (80.00%), Postives = 84/90 (93.33%), Query Frame = 2 Query: 251 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 520 E+Y IYI+KV+KQVHPD GISS+AM IMNSF+NDIFE++A EASRLA YN+K TITSRE+QTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 33 ESYSIYIYKVMKQVHPDTGISSRAMSIMNSFVNDIFERIAAEASRLAHYNRKSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 122
BLAST of CF832450 vs. ExPASy Swiss-Prot
Match: H2BL1_PSAMI (Late histone H2B.2.1 OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 1.110e-35 Identity = 73/90 (81.11%), Postives = 84/90 (93.33%), Query Frame = 2 Query: 251 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 520 E+Y IYI+KVLKQVHPD GISSKAM IMNSF+ND+FE++A EASRLA YNKK TI+SRE+QTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 34 ESYGIYIYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 123
BLAST of CF832450 vs. ExPASy Swiss-Prot
Match: H2B6_WHEAT (Histone H2B.6 OS=Triticum aestivum GN=TH123 PE=1 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 1.450e-35 Identity = 75/90 (83.33%), Postives = 84/90 (93.33%), Query Frame = 2 Query: 245 SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFT 514 S ETYKIYIFKVLKQ+ P++GISSK+M I+NS INDIFEKLA E+++LARYNKKPTITSREIQTAVRLV PGELAKHAVSEGTKAVT+FT Sbjct: 30 SNETYKIYIFKVLKQIDPNMGISSKSMSIINSIINDIFEKLAGESAKLARYNKKPTITSREIQTAVRLVFPGELAKHAVSEGTKAVTRFT 119
BLAST of CF832450 vs. ExPASy Swiss-Prot
Match: H2BL4_STRPU (Late histone H2B.L4 (Fragment) OS=Strongylocentrotus purpuratus PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.893e-35 Identity = 72/90 (80.00%), Postives = 85/90 (94.44%), Query Frame = 2 Query: 251 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 520 E+Y IYI+KVLKQVHPD GISS+AM IMNSF+ND+FE++A EASRLA+YNKK TI+SRE+QTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 17 ESYGIYIYKVLKQVHPDTGISSRAMSIMNSFVNDVFERIAGEASRLAQYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 106
BLAST of CF832450 vs. ExPASy Swiss-Prot
Match: H2BL2_PSAMI (Late histone H2B.2.2 OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.893e-35 Identity = 72/90 (80.00%), Postives = 85/90 (94.44%), Query Frame = 2 Query: 251 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 520 E+Y IYI+KVLKQVHPD GISSKAM IMNSF+ND+FE++A EASRL++YNKK TI+SRE+QTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 34 ESYGIYIYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLSQYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 123
BLAST of CF832450 vs. ExPASy Swiss-Prot
Match: H2BL1_STRPU (Late histone H2B.L1 OS=Strongylocentrotus purpuratus PE=1 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.893e-35 Identity = 72/90 (80.00%), Postives = 83/90 (92.22%), Query Frame = 2 Query: 251 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 520 E+Y IYI+KVLKQVHPD GISS+AM IMNSF+ND+FE++A EASRLA YNKK TITSRE+QT VRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 33 ESYGIYIYKVLKQVHPDTGISSRAMSIMNSFVNDVFERIAAEASRLAHYNKKSTITSREVQTVVRLLLPGELAKHAVSEGTKAVTKYTTS 122
BLAST of CF832450 vs. ExPASy Swiss-Prot
Match: H2BE_STRPU (Histone H2B, embryonic OS=Strongylocentrotus purpuratus PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 3.230e-35 Identity = 73/90 (81.11%), Postives = 85/90 (94.44%), Query Frame = 2 Query: 251 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 520 E+Y IYI+KVLKQVHPD GISS+AM IMNSF+NDIFE++A E+SRLA+YNKK TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 34 ESYGIYIYKVLKQVHPDTGISSRAMVIMNSFVNDIFERIAGESSRLAQYNKKSTISSREIQTAVRLILPGELAKHAVSEGTKAVTKYTTS 123
BLAST of CF832450 vs. ExPASy Swiss-Prot
Match: H2BE2_PSAMI (Histone H2B.2, embryonic OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 4.218e-35 Identity = 73/90 (81.11%), Postives = 85/90 (94.44%), Query Frame = 2 Query: 251 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 520 E+Y IYI+KVLKQVHPD GISS+AM IMNSF+NDIFE++A E+SRLA+YNKK TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 33 ESYGIYIYKVLKQVHPDTGISSRAMIIMNSFVNDIFERIAGESSRLAQYNKKSTISSREIQTAVRLILPGELAKHAVSEGTKAVTKYTTS 122
BLAST of CF832450 vs. ExPASy Swiss-Prot
Match: H2B1A_HUMAN (Histone H2B type 1-A OS=Homo sapiens GN=HIST1H2BA PE=1 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 4.218e-35 Identity = 73/90 (81.11%), Postives = 83/90 (92.22%), Query Frame = 2 Query: 251 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 520 E+Y IYI+KVLKQVHPD GISSKAM IMNSF+ DIFE++A EASRLA Y+K+ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 37 ESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 126 The following BLAST results are available for this feature:
BLAST of CF832450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832450 ID=CF832450; Name=CF832450; organism=Citrus sinensis; type=EST; length=748bpback to top |