CF832451

Overview
NameCF832451
Unique NameCF832451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP3A4_HUMAN (Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1 SV=4)

HSP 1 Score: 117.087 bits (292), Expect = 1.316e-25
Identity = 63/177 (35.59%), Postives = 104/177 (58.76%), Query Frame = -3
Query:  346 VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVS---YFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 864
            ++ +  +F FAG ETTS +L++ M  L+ H D Q++ ++E+  V  N  P  YD +  ++ + M++ E LRL+P    L R   K+ ++  + +P GV + +P   +H+DP+ W  +  +F PERF    SK  K+ +    Y PF  GPR C+G  FAL+  K+A+  +LQN+SF+
Sbjct:  295 LVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYW-TEPEKFLPERF----SKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 466          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP3A2_RAT (Cytochrome P450 3A2 OS=Rattus norvegicus GN=Cyp3a2 PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.718e-25
Identity = 63/174 (36.21%), Postives = 100/174 (57.47%), Query Frame = -3
Query:  346 VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 864
            +I +  +F FAG ETTS  L++ +  L+ H D Q++ ++E+     +  P  YD +  ++ + M+L E LRLYP    L R   K+ +L  L +P G  + +P   +H DP+ W     EF PERF++  +K + +   Y PF  GPR C+G  FAL+  K+A+  +LQN+SF+
Sbjct:  296 IIAQSVIFIFAGYETTSSTLSFVLYFLATHPDIQKKLQEEIDGALPSKAPPTYDIVMEMEYLDMVLNETLRLYPIGNRLERVCKKDIELDGLFIPKGSVVTIPTYALHHDPQHWP-KPEEFHPERFSKE-NKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQ 467          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP4AO_PIG (Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.244e-25
Identity = 72/202 (35.64%), Postives = 114/202 (56.44%), Query Frame = -3
Query:  262 ECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVP--TLHPELGTQLILRKL 855
            E   F F G +TT+  ++W +  L+ H + Q+R R+E+  + G+     +D L+ +    M + E LRLYPPV  +SR + K  T     +LPAG+ + L +  +H +P++W  +  EF P RFA G   +A++  ++ PF+ G R C+G+ FA+ E K+A+A+ L    FEL+P     P A P   L+ + G  L LRKL
Sbjct:  308 EVDTFMFEGHDTTASGISWILYALASHPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGRSLPAGITLSLSIYGLHHNPQVWP-NPEEFDPSRFAPG---SARHSHAFMPFSGGSRNCIGKQFAMNEMKVAVALTL--LRFELAPDPSRKPIATPEVVLNSKNGIHLKLRKL 503          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP3A1_RAT (Cytochrome P450 3A1 OS=Rattus norvegicus GN=Cyp3a1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.244e-25
Identity = 60/168 (35.71%), Postives = 100/168 (59.52%), Query Frame = -3
Query:  346 LFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 846
            +F FAG E TS  L++ +  L+ H D Q++ ++E+ +   N  P  YD +  ++ + M+L E LRLYP    L R   K+ ++  + +P G  + +P   +H+DP+ W  +  EF+PERF++  +K + +   Y PF  GPR C+G  FAL+  K+A+  +LQN+SF+
Sbjct:  302 IFIFAGYEPTSSTLSFVLHSLATHPDTQKKLQEEIDRALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLERVCKKDVEINGVFMPKGSVVMIPSYALHRDPQHWP-EPEEFRPERFSKE-NKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQ 467          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP3A6_RABIT (Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CYP3A6 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.931e-25
Identity = 63/175 (36.00%), Postives = 102/175 (58.29%), Query Frame = -3
Query:  343 VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PNYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFEL 864
            V+ +  +  FAG ETTS  L++ M LL+ H D Q++ ++E+  +  N +   YD L  ++ + M++ E LRLYP    L R   K+  +    +P G  + +P   +H+DP+ W  +  EF+PERF++  +K   N   Y PF  GPR C+G  FAL+  K+A+  ++QN+SF+L
Sbjct:  293 VVAQSIIILFAGYETTSSTLSFIMHLLATHPDVQQKLQEEIDTLLPNKELATYDTLVKMEYLDMVVNETLRLYPIAGRLERVCKKDVDINGTFIPKGTIVMMPTYALHRDPQHWT-EPDEFRPERFSKK-NKDNINPYIYHPFGAGPRNCLGMRFALMNIKLALVRLMQNFSFKL 465          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP3AL_CALJA (Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3A21 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.828e-25
Identity = 61/174 (35.06%), Postives = 102/174 (58.62%), Query Frame = -3
Query:  346 VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 864
            ++ +  +F FAG ETTS  L++ M  L+ H D Q++ ++E+  V  N  P  YD +  ++ + M++ E LRL+P    L R   K+ ++  + +P GV + +P   +H DP+ W  +  +F PERF++  +K   +   Y PF  GPR C+G  FAL+  K+A+  +LQN+SF+
Sbjct:  295 LVAQSIIFIFAGYETTSSTLSFIMYELATHPDVQQKLQEEIDAVLPNKAPATYDTVLQMEYLDMVVNETLRLFPLAMRLERVCKKDVEINGVFIPKGVVVMIPSYALHYDPKYW-TEPEKFLPERFSKN-NKDNIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFK 466          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: C13B1_CAEEL (Putative cytochrome P450 cyp-13B1 OS=Caenorhabditis elegans GN=cyp-13B1 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.828e-25
Identity = 64/171 (37.43%), Postives = 101/171 (59.06%), Query Frame = -3
Query:  355 VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPNYDGLNHLKIVQMILYEVLRLYPPV-TVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNY 864
            VI  C +F  AG +TT+  L +   LL+KH +  + A++EV  V G+   +YD +  LK +  ++ E LRLYP      SR  +K T LG++ +  GV+I   ++ +H+  E+WG +A +F PER+ E    ++++ +S+ PF  GPR CVG    L EAK A+A +L+ Y
Sbjct:  310 VIGACFVFLLAGFDTTANSLAYASYLLAKHPEKMKLAQEEVDTVVGSENVSYDDMTKLKYLDAVVRESLRLYPVAWFACSRECVKPTTLGDIYIDKGVKIEADVMSLHRSKEIWGENADDFVPERWLE---PSSRHTMSWIPFGAGPRQCVGMRLGLSEAKTALAHLLRRY 477          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP4S3_DROME (Probable cytochrome P450 4s3 OS=Drosophila melanogaster GN=Cyp4s3 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.999e-25
Identity = 67/199 (33.67%), Postives = 113/199 (56.78%), Query Frame = -3
Query:  262 EECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPNYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 858
            EE   F F G +TTS  + + + LLSK+ D Q+RA +E  ++ G  K +      +  ++ ++ E LR+YP V   SR VL++ ++G LT+P G  I   + ++H+DP+ +  D   F P+RF   +++   +  ++  F+ GPR C+GQ FA++E K ++AM+L++Y F   P   H P  +  L  + G  + LR L
Sbjct:  299 EEVDTFMFEGHDTTSSAIAFALSLLSKNPDVQQRAFEEASELEGREKES------MPYLEAVIKETLRIYPSVPFFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFP-DPERFDPDRFL--VNEKQMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRF--LPDKDHQPKPLAELVTKSGNGIRLRIL 486          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP3AV_MESAU (Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CYP3A31 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.529e-25
Identity = 58/174 (33.33%), Postives = 106/174 (60.92%), Query Frame = -3
Query:  346 VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNN-KPNYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 864
            +I +  +F FAG +TTS  L++ + LL+ H D Q++ ++E+     N  +P+YD +  ++ + M+L E LRLYP  + L R   ++ ++  + +P G  + +P+  +H DP+ W  +  +F+PERF++  +K + +   + PF  GPR C+G  FAL+  K+A+  +LQN+S +
Sbjct:  293 IIAQSIIFIFAGYDTTSSTLSFALYLLATHPDVQKKLQEEIDIALPNKARPSYDKVMEMEYLDMVLNETLRLYPIGSRLERVCKQDVEMDGVFVPKGSIVMVPVFALHYDPQYWP-EPEKFRPERFSKE-NKGSIDPYIFLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSLQ 464          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP3AE_CAVPO (Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 6.529e-25
Identity = 65/200 (32.50%), Postives = 111/200 (55.50%), Query Frame = -3
Query:  268 VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PNYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILR 864
            ++ +  +F FAG ETTS  L++ M  L+ H D Q++ +QE+ +   N   P YD +  ++ + M++ E LRLYP    + R   K+ ++  ++ P G  + +P   +H+D + W  +  EF+PERF++  +K   +   Y PF  GPR C+G   AL+  K+A+  +LQN+SF     Y    T +P     LG++ +L+
Sbjct:  295 ILAQSIIFIFAGYETTSSTLSFIMYSLATHPDVQKKLQQEIDKTLPNKAFPTYDVMMEMEYLDMVVNETLRLYPVTNRIERMSKKDFEINGMSFPKGTGVMIPSFALHRDSKYWP-EPDEFRPERFSKK-NKENIDPYIYMPFGNGPRNCIGMRMALMNLKLALIRLLQNFSF-----YPCKETQIPL---RLGSEALLQ 484          
The following BLAST results are available for this feature:
BLAST of CF832451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 457
Match NameE-valueIdentityDescription
CP3A4_HUMAN1.316e-2535.59Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1... [more]
CP3A2_RAT1.718e-2536.21Cytochrome P450 3A2 OS=Rattus norvegicus GN=Cyp3a2... [more]
CP4AO_PIG2.244e-2535.64Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2... [more]
CP3A1_RAT2.244e-2535.71Cytochrome P450 3A1 OS=Rattus norvegicus GN=Cyp3a1... [more]
CP3A6_RABIT2.931e-2536.00Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CY... [more]
CP3AL_CALJA3.828e-2535.06Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3... [more]
C13B1_CAEEL3.828e-2537.43Putative cytochrome P450 cyp-13B1 OS=Caenorhabditi... [more]
CP4S3_DROME4.999e-2533.67Probable cytochrome P450 4s3 OS=Drosophila melanog... [more]
CP3AV_MESAU6.529e-2533.33Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CY... [more]
CP3AE_CAVPO6.529e-2532.50Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832451 ID=CF832451; Name=CF832451; organism=Citrus sinensis; type=EST; length=866bp
TTTTTTTTTTTTTTACCCAGCATTAATGCTCTAATTCTAATCATGGTATT
ATAAAATTTTCCAATGTGGGGAAACATCTTTACTCTAAATAAAACTAGAG
TTGTGTTGAGCTCAATTTAAAAATCTAAACAGCTCTTGTCTAAGCTTTGA
ATCTCAATACAAAATTAAATACATTAAACTTCATTATAAAAGAGTCTACA
TTGGCATCATGCTAATCTTATTGACAATATATAGTTGCCGGTATTAATTA
TTTTTGCACCTTAGTTTCCGTAGAATCAATTGGGTACCCAGTTCCGGATG
AAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGATGGAGACAACTCGA
ATGAGTAGTTTTGAAGAATCATTGCCATGGCCATTTTTGCTTCTACTAGA
GCAAAATTTTGTCCAACACATATCCTAGGACCCAATGCGAATGGGAAATA
TGAAACTTGATTTTTGGCCGCCTTTGAAATTCCTTCCGCAAACCTTTCCG
GCTTAAACTCAACTGCATCGTAACCCCAAAGTTCAGGATCCTGGTGAACT
AGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGTAATGTCAAGTTTCC
GAGTTTCGTTTCCTTAAGAACAGATCGACTAAGCACAGTTACAGGCGGAT
AAAGCCTGAGTACCTCGTAAAGTATCATCTGGACAATTTTGAGGTGATTC
AATCCATCATAGTTGGGCTTATTATTGCCAAACACTTGCAAAACCTCTTG
CCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAATAAGACCATCGTCC
AATTAAGCAAAACAGAGGTAGTCTCTTGGCCGGCAAAGTAAAATAGCTTA
CACTCTTCGATCACAT
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