CF832451

Overview
NameCF832451
Unique NameCF832451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP3A9_RAT (Cytochrome P450 3A9 OS=Rattus norvegicus GN=Cyp3a9 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.114e-24
Identity = 60/174 (34.48%), Postives = 99/174 (56.90%), Query Frame = -3
Query:  346 VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PNYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 864
            ++ +  +F FAG ETTS  L++ + LL+ H D Q++ + E+     N     YD L  ++ + M++ E LRLYP    L R    + ++  + +P G  + +P   +H+DP  W  +  EF+PERF++  ++   N   Y PF  GPR C+G  FAL+  K+A+  +LQN+SF+
Sbjct:  295 IVAQSVIFIFAGYETTSSALSFVLYLLAIHPDIQKKLQDEIDAALPNKAHATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGVFIPKGTVVMIPTFALHKDPHYWP-EPEEFRPERFSKK-NQDNINPYMYLPFGNGPRNCIGMRFALMNMKVALFRVLQNFSFQ 466          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: C13A4_CAEEL (Putative cytochrome P450 CYP13A4 OS=Caenorhabditis elegans GN=cyp-13A4 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.114e-24
Identity = 56/176 (31.82%), Postives = 108/176 (61.36%), Query Frame = -3
Query:  340 VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPNYDGLNHLKIVQMILYEVLRLYPPVTVL-SRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELS 864
            +I +  +F  AG +TT++ L+++  LL+ H + Q++ ++EV +   + +  +D ++ LK ++ ++ E LR+YP  +++ +R  +K+T +  + +  G  + +    +H DP++WG DA EFKPER+  G  +    +  Y PF +GPRIC+G   A++E K+ +  IL+ Y+F+ S
Sbjct:  316 IIGQLFVFLLAGYDTTALSLSYSSYLLATHPEIQKKLQEEVDRECPDPEVTFDQISKLKYMECVVKEALRMYPLASLVHNRKCMKKTNVLGVEIDEGTNVQVDTWTLHYDPKVWGDDASEFKPERWETG-DELFYAKGGYLPFGMGPRICIGMRLAMMEEKLLLTHILKKYTFDTS 490          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP4D1_DROSI (Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4d1 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.455e-24
Identity = 63/189 (33.33%), Postives = 102/189 (53.97%), Query Frame = -3
Query:  301 EECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVPTL 858
            EE   F F G +TTS  L +    ++ H + Q++  +E+  V GN+K    +Y+ LN L  V + + E LR+YP V +L R VL++ ++    +PAG  IG+  + + +  EL+  +   FKPERF    +    N  +Y PF+ GPR C+GQ FA++E K  +A +L++Y  +        P  +  L
Sbjct:  308 EEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFS-EPNSFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAEL 495          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP4D1_DROME (Cytochrome P450 4d1 OS=Drosophila melanogaster GN=Cyp4d1 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.455e-24
Identity = 63/189 (33.33%), Postives = 102/189 (53.97%), Query Frame = -3
Query:  301 EECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVPTL 858
            EE   F F G +TTS  L +    ++ H + Q++  +E+  V GN+K    +Y+ LN L  V + + E LR+YP V +L R VL++ ++    +PAG  IG+  + + +  EL+  +   FKPERF    +    N  +Y PF+ GPR C+GQ FA++E K  +A +L++Y  +        P  +  L
Sbjct:  308 EEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFS-EPNSFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAEL 495          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP3AH_CAVPO (Cytochrome P450 3A17 OS=Cavia porcellus GN=CYP3A17 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.900e-24
Identity = 66/200 (33.00%), Postives = 109/200 (54.50%), Query Frame = -3
Query:  268 VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PNYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILR 864
            ++ +   F  AG ETTS  L + M  L+ H D Q++ +QE+ +   N   P YD +  ++ + M++ E LRLYP    + R   K+ ++  ++ P G  + +P   +H+D + W  +  EF+PERF++  +K   +   Y PF  GPR C+G   AL+  K+A+  +LQN+SF     Y    T +P     LG+Q+IL+
Sbjct:  295 ILAQSIFFIVAGYETTSSTLCFIMYSLATHPDVQKKLQQEIDKTLPNKAFPTYDVMMEMEYLDMVVNETLRLYPVTNRIERMSKKDFEINGMSFPKGTGVMIPSFALHRDSKYWP-EPDEFRPERFSKK-NKENIDPYIYMPFGNGPRNCIGMRMALMNLKLALIRLLQNFSF-----YTCKETQIPL---RLGSQVILQ 484          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP4F2_HUMAN (Leukotriene-B(4) omega-hydroxylase 1 OS=Homo sapiens GN=CYP4F2 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.232e-24
Identity = 67/197 (34.01%), Postives = 104/197 (52.79%), Query Frame = -3
Query:  289 ECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWG----YDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVPTLHPEL 855
            E   F F G +TT+  L+W +  L+KH ++QER RQEV ++  + +P    +D L HL  + M + E LRL+PPV V+SR V ++  L     +P G+   + +   H +P +W     YD   F PE   E      ++ +++ PF+ GPR C+GQ FA+ E K+ +A+ L    F + P +       P   PEL
Sbjct:  321 EADTFMFEGHDTTASGLSWVLYHLAKHPEYQERCRQEVQELLKDREPKEIEWDDLAHLPFLTMCMKESLRLHPPVPVISRHVTQDIVLPDGRVIPKGIICLISVFGTHHNPAVWPDPEVYDPFRFDPENIKE------RSPLAFIPFSAGPRNCIGQTFAMAEMKVVLALTL--LRFRVLPDHTE-----PRRKPEL 504          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP3A8_MACFA (Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3A8 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.232e-24
Identity = 58/174 (33.33%), Postives = 102/174 (58.62%), Query Frame = -3
Query:  346 VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 864
            ++ +  +F FAG ETTS +L++ +  L+ H D Q++ ++E+  V  N  P  YD +  ++ + M++ E LR++P    L R   K+ ++  + +P GV + +P   +H DP+ W  +  +F PERF++  +      + Y PF  GPR C+G  FAL+  K+A+  +LQN+SF+
Sbjct:  295 LVAQSIIFIFAGYETTSSVLSFIIYELATHPDVQQKLQEEIDTVLPNKAPPTYDTVLQMEYLDMVVNETLRIFPIAMRLERVCKKDVEINGIFIPKGVVVMIPSYALHHDPKYWP-EPEKFLPERFSKKNNDNIDPYI-YTPFGSGPRNCIGMRFALMNMKLAIIRVLQNFSFK 466          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP3AR_ONCMY (Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp3a27 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24
Identity = 59/175 (33.71%), Postives = 99/175 (56.57%), Query Frame = -3
Query:  343 VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFEL 864
            ++ +  +F FAG ET+S  +++    L+ +     + ++E+  VF N  P  Y+ L  +  +  +L E LRLYP    L R   K  ++  + +P    + +P   +H+DPE+W  D  EFKPERF++  +K + +  +Y PF  GPR C+G  FAL+  K+AM  ILQ+++F +
Sbjct:  300 ILSQAMIFIFAGYETSSSTMSFLAYNLATNHHVMTKLQEEIDTVFPNKAPIQYEALMQMDYLDCVLNESLRLYPIAPRLERVAKKTVEINGIVIPKDCIVLVPTWTLHRDPEIWS-DPEEFKPERFSKE-NKESIDPYTYMPFGAGPRNCIGMRFALIMIKLAMVEILQSFTFSV 472          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP134_DROME (Probable cytochrome P450 313a4 OS=Drosophila melanogaster GN=Cyp313a4 PE=2 SV=4)

HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24
Identity = 61/179 (34.08%), Postives = 103/179 (57.54%), Query Frame = -3
Query:  340 VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELS 864
            V +E  +  F   ETT+  + +T++LL+   ++QERA +E+  +F N      +Y     +  + +IL E +R+ PPV V+SR   ++ KL N + +P GVQI + +  +H+  ++WG DA  F P+ F    +   K+  +Y PF  G R C+G  +AL+ AK+ +A +L+NY F+ S
Sbjct:  289 VEDESNIIVFGAFETTANAVYYTLMLLAMFPEYQERAFEEIKTIFPNTGDFDVSYADTQQMVYLDLILNESMRVIPPVPVVSRQTSQDLKLSNGIVVPKGVQIAIDIYHMHRSKKIWGPDAETFNPDHFLPH-NIQDKHPYAYIPFTKGIRNCIGWRYALISAKVTLAKLLRNYRFKTS 466          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP3AF_CAVPO (Cytochrome P450 3A15 OS=Cavia porcellus GN=CYP3A15 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.219e-24
Identity = 58/173 (33.53%), Postives = 99/173 (57.23%), Query Frame = -3
Query:  349 VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PNYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSF 864
            ++ +  +F FAG ET+S  L+  M  L+ H D Q++  QE+ +   N   P YD +  ++ + M++ E LRLYP    + R   K+ ++  ++ P G  + +P   +H+D + W  +  EF+PERF++  +K   +   Y PF  GPR C+G+  AL+  K+A+  +LQN+SF
Sbjct:  295 ILAQSIIFIFAGYETSSSTLSCIMYSLATHPDVQKKLHQEIDKTLPNKAFPTYDVMMEMEYLDMVVNETLRLYPVANRIERMSKKDFEINGMSFPKGTLVMIPSFALHRDSKYWP-EPDEFRPERFSKK-NKENIDPYIYMPFGNGPRNCIGRRMALMNLKLALIRLLQNFSF 465          
The following BLAST results are available for this feature:
BLAST of CF832451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 457
Match NameE-valueIdentityDescription
CP3A9_RAT1.114e-2434.48Cytochrome P450 3A9 OS=Rattus norvegicus GN=Cyp3a9... [more]
C13A4_CAEEL1.114e-2431.82Putative cytochrome P450 CYP13A4 OS=Caenorhabditis... [more]
CP4D1_DROSI1.455e-2433.33Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4... [more]
CP4D1_DROME1.455e-2433.33Cytochrome P450 4d1 OS=Drosophila melanogaster GN=... [more]
CP3AH_CAVPO1.900e-2433.00Cytochrome P450 3A17 OS=Cavia porcellus GN=CYP3A17... [more]
CP4F2_HUMAN4.232e-2434.01Leukotriene-B(4) omega-hydroxylase 1 OS=Homo sapie... [more]
CP3A8_MACFA4.232e-2433.33Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3... [more]
CP3AR_ONCMY5.527e-2433.71Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp... [more]
CP134_DROME5.527e-2434.08Probable cytochrome P450 313a4 OS=Drosophila melan... [more]
CP3AF_CAVPO7.219e-2433.53Cytochrome P450 3A15 OS=Cavia porcellus GN=CYP3A15... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832451 ID=CF832451; Name=CF832451; organism=Citrus sinensis; type=EST; length=866bp
TTTTTTTTTTTTTTACCCAGCATTAATGCTCTAATTCTAATCATGGTATT
ATAAAATTTTCCAATGTGGGGAAACATCTTTACTCTAAATAAAACTAGAG
TTGTGTTGAGCTCAATTTAAAAATCTAAACAGCTCTTGTCTAAGCTTTGA
ATCTCAATACAAAATTAAATACATTAAACTTCATTATAAAAGAGTCTACA
TTGGCATCATGCTAATCTTATTGACAATATATAGTTGCCGGTATTAATTA
TTTTTGCACCTTAGTTTCCGTAGAATCAATTGGGTACCCAGTTCCGGATG
AAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGATGGAGACAACTCGA
ATGAGTAGTTTTGAAGAATCATTGCCATGGCCATTTTTGCTTCTACTAGA
GCAAAATTTTGTCCAACACATATCCTAGGACCCAATGCGAATGGGAAATA
TGAAACTTGATTTTTGGCCGCCTTTGAAATTCCTTCCGCAAACCTTTCCG
GCTTAAACTCAACTGCATCGTAACCCCAAAGTTCAGGATCCTGGTGAACT
AGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGTAATGTCAAGTTTCC
GAGTTTCGTTTCCTTAAGAACAGATCGACTAAGCACAGTTACAGGCGGAT
AAAGCCTGAGTACCTCGTAAAGTATCATCTGGACAATTTTGAGGTGATTC
AATCCATCATAGTTGGGCTTATTATTGCCAAACACTTGCAAAACCTCTTG
CCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAATAAGACCATCGTCC
AATTAAGCAAAACAGAGGTAGTCTCTTGGCCGGCAAAGTAAAATAGCTTA
CACTCTTCGATCACAT
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