CF832451

Overview
NameCF832451
Unique NameCF832451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP27B_HUMAN (25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial OS=Homo sapiens GN=CYP27B1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.853e-12
Identity = 57/191 (29.84%), Postives = 91/191 (47.64%), Query Frame = -3
Query:  274 AGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPNYDG---LNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERF-AEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLI 834
            AG +T S  L+W +  LS+H + Q     E+          Y     L+ L +++ ++ EVLRLYP V   SR   K+  +G+  +P    + L      +DP  +  +   F+P R+  EG      +  +  PF  G R C+G+  A +E +MA+A IL +  FE+ P     P A P + P+  T L+
Sbjct:  317 AGVDTVSNTLSWALYELSRHPEVQTALHSEITAALSPGSSAYPSATVLSQLPLLKAVVKEVLRLYPVVPGNSRVPDKDIHVGDYIIPKNTLVTLCHYATSRDPAQFP-EPNSFRPARWLGEG---PTPHPFASLPFGFGKRSCMGRRLAELELQMALAQILTH--FEVQPE----PGAAP-VRPKTRTVLV 496          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.853e-12
Identity = 42/171 (24.56%), Postives = 85/171 (49.71%), Query Frame = -3
Query:  340 YFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFG---NNKPNYDGLNHLKIVQMILYEVLRLYPPVTVL-SRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELS 840
            Y AG +T+++ + W M  L K+    ++A++E+    G     +   + ++ L+ +++++ E LRL+PP  +L  R  + + K+    +P    + +    + ++PELW  +  EF PERF +       N     PF  G +IC G  F +   ++ +  +L  + + L+
Sbjct:  302 YLAGVDTSAITMIWAMAELVKNPRVMKKAQEEIRTCIGIKQKERIEEEDVDKLQYLKLVIKETLRLHPPAPLLLPRETMADIKIQGYDIPRKTILLVNAWSIGRNPELWE-NPEEFNPERFIDCPMDYKGNSFEMLPFGSGRKICPGIAFGIATVELGLLNLLYYFDWRLA 471          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.853e-12
Identity = 49/168 (29.17%), Postives = 81/168 (48.21%), Query Frame = -3
Query:  343 YFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQ-VFGNNKPNYDGLNHLKIVQMILYEVLRLYPPVTVL-SRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFEL 840
            + AG +T S  + W M  L ++    +RA++EV   V G        L+ L  ++ ++ EVLRL+PP  +L  R + +   +    +PA  ++ +    +  DP  W  +  EF PERF               PF +G R C G NFA+   ++A+A +L  + +EL
Sbjct:  299 FVAGTDTASATIIWIMSELIRNPKAMKRAQEEVRDLVTGKEMVEEIDLSKLLYIKSVVKEVLRLHPPAPLLVPREITENCTIKGFEIPAKTRVLVNAKSIAMDPCCWE-NPNEFLPERFLVSPIDFKGQHFEMLPFGVGRRGCPGVNFAMPVVELALANLLFRFDWEL 465          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.339e-12
Identity = 46/172 (26.74%), Postives = 85/172 (49.42%), Query Frame = -3
Query:  343 YFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPNYD-GLNHLKIVQMILYEVLRLYPPVTV-LSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISK----AAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFEL 840
            + AG +T+S  + W +  L ++     +A+QE+ +V G ++   +  L  L  ++ I+ E  RL+P   + L R   +  ++    +P G  + L +  + +DP  W  D +EF+PERF  G  K       N     PF  G RIC G N  +   ++ +A ++  ++++L
Sbjct:  302 FVAGTDTSSSTVEWAIAELIRNPKILAQAQQEIDKVVGRDRLVGELDLAQLTYLEAIVKETFRLHPSTPLSLPRIASESCEINGYFIPKGSTLLLNVWAIARDPNAWA-DPLEFRPERFLPGGEKPKVDVRGNDFEVIPFGAGRRICAGMNLGIRMVQLMIATLIHAFNWDL 472          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP6D2_DROME (Probable cytochrome P450 6d2 OS=Drosophila melanogaster GN=Cyp6d2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.339e-12
Identity = 54/182 (29.67%), Postives = 88/182 (48.35%), Query Frame = -3
Query:  337 LFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVF--GNNKPN----YDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLG--NLTLPAGVQIGLPMILVHQDPELW----GYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSP 846
            LFY AG E+T+    +T+  LS + +  + A++EV  V    N KP     Y+ +  LK + + + E +R YP +  L+R   ++  +   N  +  G  I + +  + +DP  +    GYD     P RF    +    +Q +Y PF  GPR C+      V +K+A+A IL N+    SP
Sbjct:  310 LFYVAGSESTAAASAFTLYELSMYPELLKEAQEEVDAVLMKHNLKPKDRFTYEAVQDLKFLDICIMETIRKYPGLPFLNRECTEDYPVPGTNHIIAKGTPILISLFGMQRDPVYFPNPNGYD-----PHRFDS--NNMNYDQAAYMPFGEGPRHCIALRMGKVNSKVAVAKILANFDLVQSP 484          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP2M1_ONCMY (Cytochrome P450 2M1 OS=Oncorhynchus mykiss GN=cyp2m1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.339e-12
Identity = 49/166 (29.52%), Postives = 84/166 (50.60%), Query Frame = -3
Query:  349 YFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPNYDGLNHLKIVQMILYEVLRLYP-PVTVLSRSVLKETKLGNLTLPAGVQIGLPMIL-VHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSF 840
            + AG ETTS  L  + +++ K+   QE  ++E+ +V G+  P  D    +     +++EV R      T +   V+++T+  N  +P G  + LP++  V  DP+L+  +  EF PE F +      KN   +F F +G R C G+  A VE  +    +LQ ++F
Sbjct:  302 FAAGTETTSSTLRQSFLMMIKYPHIQESVQKEIDEVIGSRVPTVDDRVKMPYTDAVIHEVQRYMDLSPTSVPHKVMRDTEFYNYHIPEGTMV-LPLLSSVLVDPKLFK-NPDEFDPENFLDENGVFKKND-GFFAFGVGKRACPGEALARVELFLFFTSVLQRFTF 464          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP2J1_RABIT (Cytochrome P450 2J1 OS=Oryctolagus cuniculus GN=CYP2J1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.339e-12
Identity = 47/168 (27.98%), Postives = 83/168 (49.40%), Query Frame = -3
Query:  346 YFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGN-NKPNYDGLNHLKIVQMILYEVLRL--YPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 840
            + AG ETTS +  W ++ ++ + + QE+   E+  V G   +P+      L     +++EV R+    P+ V  R V  +T L    LP G  +   +  +H+DPE W      F PE F E  +   K + ++ PF++G R C+G+  A  E  +    ++Q ++F+
Sbjct:  309 FLAGTETTSDM-RWGLLFMALYPEIQEKVHAEIDSVIGQWQQPSMASRESLPYTNAVIHEVQRMGNILPLNV-PREVTVDTTLAGYHLPKGTVVLTNLTALHKDPEEWATPDT-FNPEHFLE--NGQFKKKEAFIPFSIGKRACLGEQLAKSELFIFFTSLMQKFTFK 471          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP2F3_CAPHI (Cytochrome P450 2F3 OS=Capra hircus GN=CYP2F3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.339e-12
Identity = 45/166 (27.11%), Postives = 80/166 (48.19%), Query Frame = -3
Query:  346 FAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PNYDGLNHLKIVQMILYEVLRLYPPVTV-LSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 837
            F G ET    L     LL K+ + Q R ++E+ +V G  + P  +    +     +++EV R    + + L   V ++T     T+P G  +   +  VH DP  +     EF PE F +  + + K   ++ PF+ G R+C+G+  A +E  + +  ILQ++S +
Sbjct:  297 FGGTETVGTTLRHAFRLLMKYPEVQVRVQEEIDRVVGRERLPTVEDRAEMPYTDAVIHEVQRFADIIPMSLPHRVTRDTNFRGFTIPRGTDVITLLNTVHYDPSQF-LKPKEFNPEHFLDA-NMSFKKSPAFMPFSAGRRLCLGEALARMELFLYLTAILQSFSLQ 460          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP2CJ_HUMAN (Cytochrome P450 2C19 OS=Homo sapiens GN=CYP2C19 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 6.339e-12
Identity = 48/165 (29.09%), Postives = 81/165 (49.09%), Query Frame = -3
Query:  346 AGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PNYDGLNHLKIVQMILYEVLRLYPPV-TVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 834
            AG ETTS  L + ++LL KH +   + ++E+ +V G N+ P      H+     +++EV R    + T L  +V  + K  N  +P G  I   +  V  D + +    + F P  F +      K+   + PF+ G RICVG+  A +E  + +  ILQN++ +
Sbjct:  297 AGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEM-FDPRHFLDEGGNFKKSNY-FMPFSAGKRICVGEGLARMELFLFLTFILQNFNLK 459          
BLAST of CF832451 vs. ExPASy Swiss-Prot
Match: CP2BJ_MOUSE (Cytochrome P450 2B19 OS=Mus musculus GN=Cyp2b19 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.339e-12
Identity = 45/165 (27.27%), Postives = 80/165 (48.48%), Query Frame = -3
Query:  352 YFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PNYDGLNHLKIVQMILYEVLRLYPPVTV-LSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYS 840
            +FAG ETTS  L ++ +++ K+    E+ ++E+ QV G+++ P  D    +     +++E+ R      + L   V K+T      +P   ++   +     DP  +      F PE F +  + A K   ++ PF+ G RIC+G+  A  E  +    ILQN+S
Sbjct:  297 FFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFTDLAPIGLPHKVTKDTLFRGYLIPKNTEVYPILSSALHDPRYFEQPD-SFNPEHFLDA-NGALKTNEAFMPFSTGKRICLGEGIARNELFLFFTTILQNFS 459          
The following BLAST results are available for this feature:
BLAST of CF832451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 457
Match NameE-valueIdentityDescription
CP27B_HUMAN4.853e-1229.8425-hydroxyvitamin D-1 alpha hydroxylase, mitochond... [more]
C71B3_ARATH4.853e-1224.56Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71A9_SOYBN4.853e-1229.17Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
F3PH_PETHY6.339e-1226.74Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
CP6D2_DROME6.339e-1229.67Probable cytochrome P450 6d2 OS=Drosophila melanog... [more]
CP2M1_ONCMY6.339e-1229.52Cytochrome P450 2M1 OS=Oncorhynchus mykiss GN=cyp2... [more]
CP2J1_RABIT6.339e-1227.98Cytochrome P450 2J1 OS=Oryctolagus cuniculus GN=CY... [more]
CP2F3_CAPHI6.339e-1227.11Cytochrome P450 2F3 OS=Capra hircus GN=CYP2F3 PE=2... [more]
CP2CJ_HUMAN6.339e-1229.09Cytochrome P450 2C19 OS=Homo sapiens GN=CYP2C19 PE... [more]
CP2BJ_MOUSE6.339e-1227.27Cytochrome P450 2B19 OS=Mus musculus GN=Cyp2b19 PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01O03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832451 ID=CF832451; Name=CF832451; organism=Citrus sinensis; type=EST; length=866bp
TTTTTTTTTTTTTTACCCAGCATTAATGCTCTAATTCTAATCATGGTATT
ATAAAATTTTCCAATGTGGGGAAACATCTTTACTCTAAATAAAACTAGAG
TTGTGTTGAGCTCAATTTAAAAATCTAAACAGCTCTTGTCTAAGCTTTGA
ATCTCAATACAAAATTAAATACATTAAACTTCATTATAAAAGAGTCTACA
TTGGCATCATGCTAATCTTATTGACAATATATAGTTGCCGGTATTAATTA
TTTTTGCACCTTAGTTTCCGTAGAATCAATTGGGTACCCAGTTCCGGATG
AAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGATGGAGACAACTCGA
ATGAGTAGTTTTGAAGAATCATTGCCATGGCCATTTTTGCTTCTACTAGA
GCAAAATTTTGTCCAACACATATCCTAGGACCCAATGCGAATGGGAAATA
TGAAACTTGATTTTTGGCCGCCTTTGAAATTCCTTCCGCAAACCTTTCCG
GCTTAAACTCAACTGCATCGTAACCCCAAAGTTCAGGATCCTGGTGAACT
AGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGTAATGTCAAGTTTCC
GAGTTTCGTTTCCTTAAGAACAGATCGACTAAGCACAGTTACAGGCGGAT
AAAGCCTGAGTACCTCGTAAAGTATCATCTGGACAATTTTGAGGTGATTC
AATCCATCATAGTTGGGCTTATTATTGCCAAACACTTGCAAAACCTCTTG
CCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAATAAGACCATCGTCC
AATTAAGCAAAACAGAGGTAGTCTCTTGGCCGGCAAAGTAAAATAGCTTA
CACTCTTCGATCACAT
back to top