CF832456

Overview
NameCF832456
Unique NameCF832456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.686e-49
Identity = 108/233 (46.35%), Postives = 148/233 (63.52%), Query Frame = 3
Query:  114 MGSFTKSKSKVTN-EEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHG----VRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            MGS  +++   T+  +EE    AM L SA VLP + ++ + LD+L+II KAGPGA++S  EIASQ+PT NP+ A  MLDR+L LL  + IL CS  T       RLY LA VAKY V +++GVS+     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+Y GF+ +  LVDV             KYP IKGINFD+
Sbjct:    1 MGSTGETQITPTHISDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPD-APVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDL 232          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.681e-48
Identity = 104/230 (45.22%), Postives = 146/230 (63.48%), Query Frame = 3
Query:  120 SFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST---HGV-RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            S T +  ++ ++EEE +  AM L SA VLP V ++ + LD+L++I KAG GA +S +E+A+Q+ T N E A  MLDR+L LL S+ IL C   T    GV RLY LAPV K+   +++GVSM P   ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+Y GF  +  +VDV             KYP IKGINFD+
Sbjct:    2 SSTANNPQINSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAE-AHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSIKGINFDL 230          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.278e-48
Identity = 103/232 (44.40%), Postives = 148/232 (63.79%), Query Frame = 3
Query:  114 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST---HGV-RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            MGS T +  ++ ++EEE +  AM L SA VLP V ++ + LD+L++I K+G GA +S  ++A+Q+PT NP+ A  MLDR+L LL S+ IL C   T    GV RLY LAPV K+   +++GVSM P   ++ DKV+M  W+ L D +++G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+Y GF  +  +VDV             KYP IKGINFD+
Sbjct:    1 MGSATNTP-QINSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTTNPD-AHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDL 230          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.399e-47
Identity = 105/232 (45.26%), Postives = 143/232 (61.64%), Query Frame = 3
Query:  114 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            MGS  +++       +E  + A+ L S+ VLP V +  + LD+L+I+ KAGPGA L  S+IAS +PTKNP  A  MLDR+L LL S++IL CS          RLY LA V K+   +++GVS+ P   ++ DKV+M  W+ LKD ILEG + +NKA GM  ++Y GTD RFN+VFN GM   +   + KI+E+YKGF+ +  LVDV             KYP IKGINFD+
Sbjct:    1 MGSTGETQMSPAQILDEEANFALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPN-APVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDL 231          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.827e-47
Identity = 103/223 (46.19%), Postives = 148/223 (66.37%), Query Frame = 3
Query:  141 KVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCS---FSTHGV-RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            +VT++E  ++  AM L SA VLP   ++ + LD+L+I+ K G  + +S +EIAS++PTKNPE A  MLDR+L LL S+++L CS    S  GV R+Y L PV KY   +++GVS+     ++ DKV+M  W+ LKD IL+G + +NKA GM  ++Y GTD RFN+VFNNGM   ++  + KI+E+YKGF+ +T LVDV             KYP++KGINFD+
Sbjct:   13 QVTDDEAALF--AMQLASASVLPMALKSALELDLLEIMAKNG--SPMSPTEIASKLPTKNPE-APVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLKGINFDL 230          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.020e-46
Identity = 105/238 (44.12%), Postives = 147/238 (61.76%), Query Frame = 3
Query:  114 MGSFTKSKSKVTN---EEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKA---GPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            MGS   +++++T     +EE    AM L SA VLP V +A + LDVL+I+ K+   G GA +S +EIA+Q+PT NP+ A  MLDRVL LL S++++ CS          RLY LAPV K+   +++GVS+ P   ++ DKV+M  W+ LKD IL+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI E Y GF+ +  +VDV             KYP IKGINFD+
Sbjct:    1 MGSTGNAETQLTPTHVSDEEANLFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTTNPD-APVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVAKYPSIKGINFDL 237          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.309e-45
Identity = 93/211 (44.08%), Postives = 136/211 (64.45%), Query Frame = 3
Query:  177 AMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            AM L +A VLPAV  A + LD+L+I+ +AGPGA L+  E+ASQ+PT+NP+ A  MLDR+  LL S+++L C+          RLY LAP+ K+ V +++GVS+ P   +  D+V +  W+ +KD ILEG + ++KA GM  +DY GTD RFN++FN  M   ++ ++ KI+E+Y GF+ +  +VDV             KYP IKGINFD+
Sbjct:    5 AMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPD-APVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDL 214          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 3.809e-45
Identity = 99/221 (44.80%), Postives = 138/221 (62.44%), Query Frame = 3
Query:  150 NEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKA-GPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSF----STHGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            + +EE    AM L SA VLP   +A + LDVL+I+ K+  P   +S +EIA+Q+PT NPE A  MLDRVL LL S++++  +     S    RLY LAPV K+   +++GVS+ P++  + DKV++  WF LKD ILEG + +NKA GM+ +DY GTD RFN+VFN GM   ++  + KI+E Y GF+ +T +VDV             KYP I  INFD+
Sbjct:   16 SSDEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPE-APVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGIPFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL 235          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.469e-44
Identity = 88/221 (39.82%), Postives = 133/221 (60.18%), Query Frame = 3
Query:  147 TNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHG----VRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            +N++++ +  AM L SA VLP V +  + LD+L+ I KAGP   +S+SE+ +Q+P  N   A  M+DR+  LL S+++L C+          R Y LAPV K+ + +  GVS+ P + ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y G D RFN+VFN+GM   ++  + KIVE Y GF  +  LVDV             K+  +KGINFD+
Sbjct:    3 SNQDDQAFLFAMQLASASVLPMVLKTAIELDLLETIAKAGPHGSVSSSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGIPFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGLKTLVDVGGGTGASLNMITSKHKSLKGINFDL 223          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.942e-42
Identity = 91/208 (43.75%), Postives = 131/208 (62.98%), Query Frame = 3
Query:  177 AMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSF-STHGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            AM L SA VLP V ++ + LD+L+II   G    +S +EIAS +PT NP+  A M+DR+L LL  ++++ CS  S    R+Y LAPV KY   +Q+GVS+     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + K+ ++Y+GFQ +T LVDV             KYP I+ INFD+
Sbjct:    4 AMQLASASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTTNPDAPA-MVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDL 208          
The following BLAST results are available for this feature:
BLAST of CF832456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT1_MEDSA9.686e-4946.35Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT2_OCIBA3.681e-4845.22Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_OCIBA6.278e-4844.40Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT2_POPTM1.399e-4745.26Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
OMT1_ARATH1.827e-4746.19Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_CLABR2.020e-4644.12Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_EUCGL1.309e-4544.08Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
IEMT_CLABR3.809e-4544.80(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_ZINEL2.469e-4439.82Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
OMT1_CHRAE3.942e-4243.75Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832456 ID=CF832456; Name=CF832456; organism=Citrus sinensis; type=EST; length=797bp
GAGCGCTCGAAAGTAAAGACAGCATAAACACAGCATAAGAGTAGTGGTAT
AAAAGATTCAAAAACACTAAGCTAAGAGCAAAGCAAAGCAGGAGCAAGAA
ATTAAACGCGCAAATGGGTTCTTTCACTAAGAGCAAATCAAAAGTGACCA
ATGAAGAGGAAGAGGTATATTCACATGCCATGGTACTGGGAAGTGCAATA
GTGCTACCCGCGGTTTTTCAAGCAGTAGTAAATCTTGATGTTCTTGATAT
CATAAACAAAGCTGGTCCTGGTGCTGAGCTTTCTGCTTCAGAGATTGCTT
CTCAAATTCCCACCAAAAATCCTGAGGGTGCTGCCAAGATGTTGGATCGG
GTTCTCGGGCTTCTGGTGAGCTTCAATATCCTTTGTTGCTCTTTCAGTAC
TCATGGAGTAAGGCTCTACAGTCTCGCTCCTGTCGCTAAATACTATGTGA
GTGATCAAAACGGCGTCTCAATGCGTCCCTATATGAACTTGTCTCTTGAC
AAAGTAATGATGCCTGGCTGGTTCCAATTGAAAGACCAAATTCTTGAAGG
AGAACTTTCGTATAATAAAGCCCTCGGAATGGATTTCTACGATTATCTGG
GCACCGACTCCAGGTTCAATGAAGTTTTCAACAATGGAATGATCGGCCAG
ACTTCTTTTGTAATCAATAAGATTGTAGAATCCTACAAAGGCTTTCAGAA
TATTACGCGCCTTGTTGACGTTGGCGGTGGTTTAGGAATCACCCTTGCGA
CCATAATTTTCAAATACCCTCATATTAAGGGTATTAATTTTGACGTA
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