CF832456

Overview
NameCF832456
Unique NameCF832456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9906 contig Csv1_Contig9906:101..897. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.498e-41
Identity = 90/208 (43.27%), Postives = 130/208 (62.50%), Query Frame = 3
Query:  177 AMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSF-STHGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            AM L  A VLP V ++ + LD+L+II   G    +S +EIAS +PT NP+  A M+DR+L LL  ++++ CS  S    R+Y LAPV KY   +Q+GVS+     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + K+ ++Y+GFQ +T LVDV             KYP I+ INFD+
Sbjct:    4 AMQLACASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTTNPDAPA-MVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDL 208          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.709e-41
Identity = 93/230 (40.43%), Postives = 133/230 (57.83%), Query Frame = 3
Query:  117 GSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTH---GVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            G++T+ K+   +++E++   A+ L +A   P + ++   L +LDI +KAG G  +S SEIASQI  KNP  A  +LDR+L LL S ++L C          R+Y  AP+  Y  S+    S+ P + L  DKVMM  WF L D ILEG + + +A GM  +DY GTD RFN VFN GM   T  V+ K++++Y GF ++  LVDV             K+ HIKGIN+D+
Sbjct:    7 GNYTQPKT--LDKDEQLAGLAVTLANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPN-APVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTHIKGINYDL 233          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.510e-38
Identity = 85/235 (36.17%), Postives = 135/235 (57.45%), Query Frame = 3
Query:  114 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPG--AELSASEIASQIPT--KNPEGAAKMLDRVLGLLVSFNILCCSFSTHGVRL---YSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            MGS     + V +EE  +Y  AM L S+ +LP   +  + L +L+++ K   G  A L+  E+ +++P    +P  AA M+DR+L LL S++++ C       R    YS APV K+   +++GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD+RFN VFN GM   +  +  K+++ Y GF+ ++ LVDV             ++PHI G+NFD+
Sbjct:    1 MGSTAGDVAAVVDEEACMY--AMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHISGVNFDL 233          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.238e-37
Identity = 88/234 (37.61%), Postives = 134/234 (57.26%), Query Frame = 3
Query:  114 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGP-GAELSASEIASQIPTK--NPEGAAKMLDRVLGLLVSFNILCCSFSTHG---VRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            MGS  +  + V +EE  +Y  AM L SA +LP   +  + L +L+++    P G  L+  E+ +++P    NP+ AA M+DR+L LL S++++ C          R YS APV K+   +++GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN VFN GM   +  +  K++E Y GF+ ++ LVDV              +P IKGINFD+
Sbjct:    1 MGSTAEDVAAVADEEACMY--AMQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPD-AADMVDRMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQIKGINFDL 231          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.451e-36
Identity = 83/238 (34.87%), Postives = 133/238 (55.88%), Query Frame = 3
Query:  114 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKA------GPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHG----VRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            MGS     +   +EE  +Y  A+ L S+ +LP   +  + L +L+ +  A      G  A L+ +E+A ++P+K    AA M+DR+L LL S+N++ C           R Y+ APV K+   +++GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD+RFN VFN GM   +  +  K+++ Y GF   + +VDV             ++PHI+GIN+D+
Sbjct:    1 MGSTAADMAAAADEEACMY--ALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPHIRGINYDL 236          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.731e-33
Identity = 77/211 (36.49%), Postives = 126/211 (59.72%), Query Frame = 3
Query:  168 YSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILE-GELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            Y   + L   I LP   +A + L+V +II++AGP A+LS S+I ++IPTKNP  AA  LDR+L +L + +IL  S +  G R+Y L   ++  V+ ++ VS+ P +  + DK ++  ++ +KD +LE G + +++  GMDF+ Y G + R N+ FN  M   ++   +++ + YKGF N+  LVDV             K+PHI+GINF++
Sbjct:   39 YLSGLGLSRLICLPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIPTKNPS-AAISLDRILRMLGASSILSVSTTKSG-RVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVAKHPHIRGINFEL 247          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.322e-26
Identity = 72/221 (32.58%), Postives = 119/221 (53.85%), Query Frame = 3
Query:  156 EEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGP-GAELSASEIASQIPTKNPEG-AAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKAL-GMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            E+     AMVL + +V PAV  A ++L++ +II KA P GA +S SEIAS++P           LDR+L LL S+++L  +  T       R+Y L+ V KY V D++   +  +        ++  W   K+ +++ ++   K + G+  Y+++G D + N++FN  M+   +  + +++E Y GF+ I+ LVDV             KYP IKGINFD+
Sbjct:   21 EDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL 241          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.931e-14
Identity = 61/222 (27.48%), Postives = 104/222 (46.85%), Query Frame = 3
Query:  135 KSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG-FQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            K  V + + + +   ++ G A  L  V +  V L ++DII+       ++ +++AS++P  +       L R+L  LV   IL    S  G + Y+L P+A   +S     SM P +     K  M  W  +KD + +   ++ KA+GM  ++YL      +++FN GM G+T  + + ++   +  FQ I  LVDV              +PHIK   FD+
Sbjct:    6 KDDVLDIKAQAHVWKIIYGFADSL--VLRCAVELGIVDIIDNNNQ--PMALADLASKLPVSDVN--CDNLYRILRYLVKMEILRVEKSDDGQKKYALEPIATL-LSRNAKRSMVPMILGMTQKDFMTPWHSMKDGLSDNGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAISDAFPHIKCTLFDL 220          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.492e-12
Identity = 58/197 (29.44%), Postives = 95/197 (48.22%), Query Frame = 3
Query:  213 VFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQIL-EGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIV-ESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            V +  V LD+ +II+ +G    ++ SE++S++P++     A  L RV+  LV   +   + S  G   Y LAP AKY V   +   +   + ++ DK  M  W  LKD +  E   ++ KALG + + Y+      N++FN  M   +  +++ +V E    F  IT LVDV              +PHIK   +D+
Sbjct:   26 VLKCAVQLDLANIIHNSG--TSMTLSELSSRLPSQPVNEDA--LYRVMRYLVHMKLFTKA-SIDGELRYGLAPPAKYLVKGWDKCMVGSILAIT-DKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNIANAFPHIKCTVYDL 216          
The following BLAST results are available for this feature:
BLAST of CF832456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
OMT2_CHRAE1.498e-4143.27Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
IMT1_MESCR9.709e-4140.43Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT1_MAIZE4.510e-3836.17Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_SACOF2.238e-3737.61Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
OMT1_ORYSJ1.451e-3634.87Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
SMT_COPJA9.731e-3336.49(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA2.322e-2632.58Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
4OMT_COPJA5.931e-1427.483'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
6OMT_COPJA2.492e-1229.44(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01O06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832456 ID=CF832456; Name=CF832456; organism=Citrus sinensis; type=EST; length=797bp
GAGCGCTCGAAAGTAAAGACAGCATAAACACAGCATAAGAGTAGTGGTAT
AAAAGATTCAAAAACACTAAGCTAAGAGCAAAGCAAAGCAGGAGCAAGAA
ATTAAACGCGCAAATGGGTTCTTTCACTAAGAGCAAATCAAAAGTGACCA
ATGAAGAGGAAGAGGTATATTCACATGCCATGGTACTGGGAAGTGCAATA
GTGCTACCCGCGGTTTTTCAAGCAGTAGTAAATCTTGATGTTCTTGATAT
CATAAACAAAGCTGGTCCTGGTGCTGAGCTTTCTGCTTCAGAGATTGCTT
CTCAAATTCCCACCAAAAATCCTGAGGGTGCTGCCAAGATGTTGGATCGG
GTTCTCGGGCTTCTGGTGAGCTTCAATATCCTTTGTTGCTCTTTCAGTAC
TCATGGAGTAAGGCTCTACAGTCTCGCTCCTGTCGCTAAATACTATGTGA
GTGATCAAAACGGCGTCTCAATGCGTCCCTATATGAACTTGTCTCTTGAC
AAAGTAATGATGCCTGGCTGGTTCCAATTGAAAGACCAAATTCTTGAAGG
AGAACTTTCGTATAATAAAGCCCTCGGAATGGATTTCTACGATTATCTGG
GCACCGACTCCAGGTTCAATGAAGTTTTCAACAATGGAATGATCGGCCAG
ACTTCTTTTGTAATCAATAAGATTGTAGAATCCTACAAAGGCTTTCAGAA
TATTACGCGCCTTGTTGACGTTGGCGGTGGTTTAGGAATCACCCTTGCGA
CCATAATTTTCAAATACCCTCATATTAAGGGTATTAATTTTGACGTA
back to top