CF832457

Overview
NameCF832457
Unique NameCF832457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length549
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:546..1095. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA_SOLME (Catalase OS=Solanum melongena PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.438e-45
Identity = 80/111 (72.07%), Postives = 98/111 (88.29%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            NFMHRDEEVDY PSR+DP R AE+YPIPS V+TGRREK  I KENNFKQ GERYR+W PDRQ+R++N+W+++L DPRVTHE+RSIW+SY SQAD+S GQK+ASRL V+P++
Sbjct:  382 NFMHRDEEVDYLPSRFDPCRPAEQYPIPSCVLTGRREKCVIPKENNFKQAGERYRTWEPDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLLVKPTM 492          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA2_CUCPE (Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.438e-45
Identity = 80/112 (71.43%), Postives = 101/112 (90.18%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKEN-NFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            NFMHRDEEV+YFPSRYD  RHAE+YP+P +V++G+RE+  I KEN NFKQ G+RYRSWAPDRQERF+NR+++AL D +VTHEVR+IW+SYW+QADRSLGQK+ASR+N RP++
Sbjct:  381 NFMHRDEEVNYFPSRYDACRHAEKYPMPPNVLSGKRERCVIPKENHNFKQAGDRYRSWAPDRQERFVNRFVEALSDSKVTHEVRNIWISYWTQADRSLGQKIASRMNARPNM 492          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA1_TOBAC (Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 PE=1 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 3.184e-45
Identity = 79/111 (71.17%), Postives = 98/111 (88.29%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            NFMHRDEEVDY PSR+DP RHAE+YPIPS V+TGRRE   IEKENNFKQ GERYRSW PDRQ+R++++W++ L DPRVT+E+RSIW+SY SQAD+S GQK+ASRL ++P++
Sbjct:  382 NFMHRDEEVDYLPSRFDPCRHAEQYPIPSRVLTGRREMCVIEKENNFKQAGERYRSWEPDRQDRYVSKWVEHLSDPRVTYEIRSIWISYLSQADKSCGQKVASRLTLKPTM 492          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA1_ARATH (Catalase-1 OS=Arabidopsis thaliana GN=CAT1 PE=1 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 3.184e-45
Identity = 82/110 (74.55%), Postives = 95/110 (86.36%), Query Frame = -2
Query:  219 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPS 548
            NFMHRDEEV+YFPSR DP RHAE+YP    V +G REK  I KENNFKQPGERYRSW  DRQERF+ R+++AL +PRVTHE+RSIW+SYWSQAD+SLGQKLA+RLNVRP+
Sbjct:  382 NFMHRDEEVNYFPSRLDPVRHAEKYPTTPIVCSGNREKCFIGKENNFKQPGERYRSWDSDRQERFVKRFVEALSEPRVTHEIRSIWISYWSQADKSLGQKLATRLNVRPN 491          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA3_ARATH (Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV=3)

HSP 1 Score: 179.489 bits (454), Expect = 9.265e-45
Identity = 78/111 (70.27%), Postives = 96/111 (86.49%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            NFMHRDEE++Y+PS++DP R AE+ P P++  TG R K  I+KENNFKQ G+RYRSWAPDRQ+RF+ RW++ L +PR+THE+R IW+SYWSQADRSLGQKLASRLNVRPSI
Sbjct:  382 NFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKCVIKKENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQKLASRLNVRPSI 492          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA2_NICPL (Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN=CAT2 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.210e-44
Identity = 78/111 (70.27%), Postives = 97/111 (87.39%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            NFMHRDEEVDY PSR+DP RHAE+YPIPS V+ GRRE   IEKENNFKQ GERYRSW PDRQ+R++++W++ L DPRVT+E+RSIW+SY SQAD+S GQK+ASRL ++P++
Sbjct:  382 NFMHRDEEVDYLPSRFDPCRHAEQYPIPSRVLNGRREMCVIEKENNFKQAGERYRSWEPDRQDRYVSKWVEHLSDPRVTYEIRSIWISYLSQADKSCGQKVASRLTLKPTM 492          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA_PEA (Catalase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.580e-44
Identity = 83/113 (73.45%), Postives = 97/113 (85.84%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKAL--CDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            N +HRDEEV+YFPSR+D  RHAER PIP+  ++ RREK  I K+N+FKQ GERYR+WAPDRQERFL RW++AL   DPR+THE+RSIWVSYWSQADRSLGQKLAS LN+RPSI
Sbjct:  382 NAIHRDEEVNYFPSRHDTVRHAERVPIPTTHLSARREKCNIPKQNHFKQAGERYRTWAPDRQERFLRRWVEALSDTDPRITHEIRSIWVSYWSQADRSLGQKLASHLNMRPSI 494          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA1_HORVU (Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 3.521e-44
Identity = 79/111 (71.17%), Postives = 96/111 (86.49%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            NF+HRDEEV+YFPSR+DPTRHAE+YP+P  V++G REK  I+KENNFKQ GERYRS+ P RQ+RFL RW+ AL D RVTHE++SIWVSYWSQ D SLGQKLASRL ++P++
Sbjct:  382 NFIHRDEEVNYFPSRFDPTRHAEKYPMPPRVLSGCREKCIIDKENNFKQAGERYRSFDPARQDRFLQRWVDALTDARVTHEIQSIWVSYWSQCDASLGQKLASRLKIKPNM 492          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSI (Catalase isozyme B OS=Oryza sativa subsp. indica GN=CATB PE=2 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 6.006e-44
Identity = 79/111 (71.17%), Postives = 94/111 (84.68%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            NFMHRDEEV+YFPSR+D  RHAE+ PIP  V+TG REK  I+KENNFKQ GERYRS+ P RQ+RFL RW+ AL DPR+THE+R IW+SYWSQ D SLGQKLASRLN++P++
Sbjct:  382 NFMHRDEEVNYFPSRFDAARHAEKVPIPPRVLTGCREKCVIDKENNFKQAGERYRSFDPARQDRFLQRWVDALSDPRITHELRGIWISYWSQCDASLGQKLASRLNLKPNM 492          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA2_MAIZE (Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3)

HSP 1 Score: 176.407 bits (446), Expect = 7.844e-44
Identity = 81/111 (72.97%), Postives = 93/111 (83.78%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            NFMHR EEVDYFPSRYD  R+A RYPIP+  I GRREK  I KENNFKQPGERYR+  P RQERF+ RW+ AL DPR+THE+R+IW+S WSQADRSLGQKLASRL+ +PS+
Sbjct:  381 NFMHRHEEVDYFPSRYDAVRNAPRYPIPTAHIAGRREKTVISKENNFKQPGERYRAMDPARQERFITRWVDALSDPRLTHEIRTIWLSNWSQADRSLGQKLASRLSAKPSM 491          
The following BLAST results are available for this feature:
BLAST of CF832457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CATA_SOLME2.438e-4572.07Catalase OS=Solanum melongena PE=2 SV=1[more]
CATA2_CUCPE2.438e-4571.43Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 ... [more]
CATA1_TOBAC3.184e-4571.17Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 P... [more]
CATA1_ARATH3.184e-4574.55Catalase-1 OS=Arabidopsis thaliana GN=CAT1 PE=1 SV... [more]
CATA3_ARATH9.265e-4570.27Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV... [more]
CATA2_NICPL1.210e-4470.27Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN... [more]
CATA_PEA1.580e-4473.45Catalase OS=Pisum sativum PE=2 SV=1[more]
CATA1_HORVU3.521e-4471.17Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2... [more]
CATA2_ORYSI6.006e-4471.17Catalase isozyme B OS=Oryza sativa subsp. indica G... [more]
CATA2_MAIZE7.844e-4472.97Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832457 ID=CF832457; Name=CF832457; organism=Citrus sinensis; type=EST; length=549bp
TTTTTTTTTTTTTTTTGAACTTCTAAAACAGACTTTTATTAATTGCAACA
ACAGGAAAAGAGTCACATAACATGCAAGTTTATTTTCTATATTACAATAT
ACAACAGCAAACATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGTG
TTCACTCCTTGCTCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTT
CAAGTGACACCTTCAAATGCTTGGCCTCACATTGAGACGAGAAGCTAGCT
TCTGACCCAGAGATCTGTCGGCCTGAGACCAGTAAGAGACCCATATGCTG
CGAACCTCATGGGTGACACGTGGGTCACATAAAGCCTTAATCCATCGATT
AAGGAACCTCTCTTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCCAG
GCTGCTTGAAGTTGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTCCT
GTAATTACATCAGAAGGAATGGGATATCTCTCAGCATGACGAGTAGGATC
ATACCTCGAAGGAAAGTAATCGACCTCCTCATCCCTGTGCATGAAATTC
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